Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.93□□□□□ -1.78
NEDD8-MDP1E9PL57 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.93□□□□□ -1.78
NEDD8-MDP1E9PL57 TPTE2P6-202ENST00000445572 1007 ntBASIC3.93□□□□□ -1.78
NEDD8-MDP1E9PL57 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC3.93□□□□□ -1.78
NEDD8-MDP1E9PL57 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC3.93□□□□□ -1.78
NEDD8-MDP1E9PL57 TPMTP4-201ENST00000450749 678 ntBASIC3.93□□□□□ -1.78
NEDD8-MDP1E9PL57 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.93□□□□□ -1.78
NEDD8-MDP1E9PL57 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC3.93□□□□□ -1.78
NEDD8-MDP1E9PL57 UBE2CP3-201ENST00000502715 450 ntBASIC3.93□□□□□ -1.78
NEDD8-MDP1E9PL57 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.93□□□□□ -1.78
NEDD8-MDP1E9PL57 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC3.93□□□□□ -1.78
NEDD8-MDP1E9PL57 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC3.93□□□□□ -1.78
NEDD8-MDP1E9PL57 RN7SKP157-201ENST00000516174 282 ntBASIC3.93□□□□□ -1.78
NEDD8-MDP1E9PL57 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC3.93□□□□□ -1.78
NEDD8-MDP1E9PL57 AC007991.1-201ENST00000522680 631 ntBASIC3.93□□□□□ -1.78
NEDD8-MDP1E9PL57 AC135001.1-201ENST00000544546 283 ntBASIC3.93□□□□□ -1.78
NEDD8-MDP1E9PL57 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.93□□□□□ -1.78
NEDD8-MDP1E9PL57 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC3.93□□□□□ -1.78
NEDD8-MDP1E9PL57 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC3.93□□□□□ -1.78
NEDD8-MDP1E9PL57 GTF2IP22-201ENST00000554443 182 ntBASIC3.93□□□□□ -1.78
NEDD8-MDP1E9PL57 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC3.93□□□□□ -1.78
NEDD8-MDP1E9PL57 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC3.93□□□□□ -1.78
NEDD8-MDP1E9PL57 AC122134.1-202ENST00000569111 1201 ntBASIC3.93□□□□□ -1.78
NEDD8-MDP1E9PL57 AC126365.2-201ENST00000580630 379 ntBASIC3.93□□□□□ -1.78
NEDD8-MDP1E9PL57 AC115085.1-201ENST00000588924 229 ntBASIC3.93□□□□□ -1.78
NEDD8-MDP1E9PL57 AL049634.3-201ENST00000604968 457 ntBASIC3.93□□□□□ -1.78
NEDD8-MDP1E9PL57 AF129408.1-201ENST00000608767 431 ntBASIC3.93□□□□□ -1.78
NEDD8-MDP1E9PL57 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
NEDD8-MDP1E9PL57 AL034408.1-202ENST00000636088 415 ntBASIC3.93□□□□□ -1.78
NEDD8-MDP1E9PL57 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.93□□□□□ -1.78
NEDD8-MDP1E9PL57 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
NEDD8-MDP1E9PL57 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.93□□□□□ -1.78
NEDD8-MDP1E9PL57 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
NEDD8-MDP1E9PL57 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
NEDD8-MDP1E9PL57 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
NEDD8-MDP1E9PL57 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
NEDD8-MDP1E9PL57 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
NEDD8-MDP1E9PL57 AC024560.2-201ENST00000507981 1497 ntBASIC3.92□□□□□ -1.78
NEDD8-MDP1E9PL57 AC095050.2-201ENST00000510748 1458 ntBASIC3.92□□□□□ -1.78
NEDD8-MDP1E9PL57 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.92□□□□□ -1.78
NEDD8-MDP1E9PL57 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.92□□□□□ -1.78
NEDD8-MDP1E9PL57 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.92□□□□□ -1.78
NEDD8-MDP1E9PL57 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC3.92□□□□□ -1.78
NEDD8-MDP1E9PL57 ZNF962P-201ENST00000443465 3140 ntBASIC3.92□□□□□ -1.78
NEDD8-MDP1E9PL57 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
NEDD8-MDP1E9PL57 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
NEDD8-MDP1E9PL57 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
NEDD8-MDP1E9PL57 STAT4-203ENST00000409995 709 ntTSL 5 BASIC3.92□□□□□ -1.78
NEDD8-MDP1E9PL57 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.92□□□□□ -1.78
NEDD8-MDP1E9PL57 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC3.92□□□□□ -1.78
NEDD8-MDP1E9PL57 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC3.92□□□□□ -1.78
NEDD8-MDP1E9PL57 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC3.92□□□□□ -1.78
NEDD8-MDP1E9PL57 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC3.92□□□□□ -1.78
NEDD8-MDP1E9PL57 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.92□□□□□ -1.78
NEDD8-MDP1E9PL57 TRBV26OR9-2-201ENST00000432077 293 ntBASIC3.92□□□□□ -1.78
NEDD8-MDP1E9PL57 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC3.92□□□□□ -1.78
NEDD8-MDP1E9PL57 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC3.92□□□□□ -1.78
NEDD8-MDP1E9PL57 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC3.92□□□□□ -1.78
NEDD8-MDP1E9PL57 ELOCP8-201ENST00000439309 332 ntBASIC3.92□□□□□ -1.78
NEDD8-MDP1E9PL57 ELOCP15-201ENST00000442090 332 ntBASIC3.92□□□□□ -1.78
NEDD8-MDP1E9PL57 HSFY3P-201ENST00000444242 1191 ntBASIC3.92□□□□□ -1.78
NEDD8-MDP1E9PL57 RPS17P13-201ENST00000448974 407 ntBASIC3.92□□□□□ -1.78
NEDD8-MDP1E9PL57 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC3.92□□□□□ -1.78
NEDD8-MDP1E9PL57 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.92□□□□□ -1.78
NEDD8-MDP1E9PL57 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC3.92□□□□□ -1.78
NEDD8-MDP1E9PL57 AC022034.3-201ENST00000471393 478 ntBASIC3.92□□□□□ -1.78
NEDD8-MDP1E9PL57 TRBV8-2-201ENST00000475637 270 ntBASIC3.92□□□□□ -1.78
NEDD8-MDP1E9PL57 RPS4XP6-201ENST00000477670 797 ntBASIC3.92□□□□□ -1.78
NEDD8-MDP1E9PL57 RPS26P15-201ENST00000488067 348 ntBASIC3.92□□□□□ -1.78
NEDD8-MDP1E9PL57 HMGB1P38-201ENST00000490557 577 ntBASIC3.92□□□□□ -1.78
NEDD8-MDP1E9PL57 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC3.92□□□□□ -1.78
NEDD8-MDP1E9PL57 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
NEDD8-MDP1E9PL57 RNA5SP164-201ENST00000516533 110 ntBASIC3.92□□□□□ -1.78
NEDD8-MDP1E9PL57 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC3.92□□□□□ -1.78
NEDD8-MDP1E9PL57 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC3.92□□□□□ -1.78
NEDD8-MDP1E9PL57 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC3.92□□□□□ -1.78
NEDD8-MDP1E9PL57 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC3.92□□□□□ -1.78
NEDD8-MDP1E9PL57 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC3.92□□□□□ -1.78
NEDD8-MDP1E9PL57 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC3.92□□□□□ -1.78
NEDD8-MDP1E9PL57 AC095057.3-201ENST00000567102 1157 ntBASIC3.92□□□□□ -1.78
NEDD8-MDP1E9PL57 MIR4789-201ENST00000577469 82 ntBASIC3.92□□□□□ -1.78
NEDD8-MDP1E9PL57 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.92□□□□□ -1.78
NEDD8-MDP1E9PL57 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.92□□□□□ -1.78
NEDD8-MDP1E9PL57 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC3.92□□□□□ -1.78
NEDD8-MDP1E9PL57 AC024220.1-201ENST00000603675 484 ntBASIC3.92□□□□□ -1.78
NEDD8-MDP1E9PL57 SNORA51-201ENST00000606420 132 ntBASIC3.92□□□□□ -1.78
NEDD8-MDP1E9PL57 AL355816.1-201ENST00000607951 118 ntBASIC3.92□□□□□ -1.78
NEDD8-MDP1E9PL57 AL354760.1-201ENST00000608357 643 ntBASIC3.92□□□□□ -1.78
NEDD8-MDP1E9PL57 AC009269.6-201ENST00000621778 588 ntBASIC3.92□□□□□ -1.78
NEDD8-MDP1E9PL57 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.92□□□□□ -1.78
NEDD8-MDP1E9PL57 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.92□□□□□ -1.78
NEDD8-MDP1E9PL57 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
NEDD8-MDP1E9PL57 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC3.92□□□□□ -1.78
NEDD8-MDP1E9PL57 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.92□□□□□ -1.78
NEDD8-MDP1E9PL57 AL049555.1-201ENST00000562834 1933 ntBASIC3.91□□□□□ -1.78
NEDD8-MDP1E9PL57 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
NEDD8-MDP1E9PL57 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC3.91□□□□□ -1.78
NEDD8-MDP1E9PL57 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
NEDD8-MDP1E9PL57 AL161912.2-201ENST00000565707 3007 ntBASIC3.91□□□□□ -1.78
NEDD8-MDP1E9PL57 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 119.6 ms