Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 TMF1P1-201ENST00000576058 373 ntBASIC3.73□□□□□ -1.81
NPIPA2E9PIF3 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC3.73□□□□□ -1.81
NPIPA2E9PIF3 AL139395.1-201ENST00000603662 160 ntBASIC3.73□□□□□ -1.81
NPIPA2E9PIF3 AC005014.3-201ENST00000605985 190 ntBASIC3.73□□□□□ -1.81
NPIPA2E9PIF3 AC112503.1-201ENST00000608436 391 ntBASIC3.73□□□□□ -1.81
NPIPA2E9PIF3 AL031666.3-201ENST00000609320 1006 ntBASIC3.73□□□□□ -1.81
NPIPA2E9PIF3 AC103858.2-201ENST00000621471 543 ntBASIC3.73□□□□□ -1.81
NPIPA2E9PIF3 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC3.73□□□□□ -1.81
NPIPA2E9PIF3 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC3.73□□□□□ -1.81
NPIPA2E9PIF3 AL590396.4-201ENST00000636779 956 ntBASIC3.73□□□□□ -1.81
NPIPA2E9PIF3 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.73□□□□□ -1.81
NPIPA2E9PIF3 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
NPIPA2E9PIF3 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC3.73□□□□□ -1.81
NPIPA2E9PIF3 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
NPIPA2E9PIF3 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
NPIPA2E9PIF3 TMEM161BP1-201ENST00000457388 1457 ntBASIC3.73□□□□□ -1.81
NPIPA2E9PIF3 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
NPIPA2E9PIF3 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
NPIPA2E9PIF3 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
NPIPA2E9PIF3 AL627171.1-201ENST00000618845 1308 ntBASIC3.72□□□□□ -1.81
NPIPA2E9PIF3 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
NPIPA2E9PIF3 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
NPIPA2E9PIF3 AC116667.1-201ENST00000604855 2072 ntBASIC3.72□□□□□ -1.81
NPIPA2E9PIF3 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
NPIPA2E9PIF3 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
NPIPA2E9PIF3 AC107081.3-201ENST00000612715 2034 ntBASIC3.72□□□□□ -1.81
NPIPA2E9PIF3 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.72□□□□□ -1.81
NPIPA2E9PIF3 RNU6-468P-201ENST00000384003 109 ntBASIC3.72□□□□□ -1.81
NPIPA2E9PIF3 HMGB3P19-201ENST00000403971 560 ntBASIC3.72□□□□□ -1.81
NPIPA2E9PIF3 AL355615.1-201ENST00000406187 641 ntBASIC3.72□□□□□ -1.81
NPIPA2E9PIF3 RNU4-6P-201ENST00000410804 122 ntBASIC3.72□□□□□ -1.81
NPIPA2E9PIF3 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC3.72□□□□□ -1.81
NPIPA2E9PIF3 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC3.72□□□□□ -1.81
NPIPA2E9PIF3 PTP4A1P5-201ENST00000420305 455 ntBASIC3.72□□□□□ -1.81
NPIPA2E9PIF3 AC241520.1-201ENST00000422654 1099 ntBASIC3.72□□□□□ -1.81
NPIPA2E9PIF3 PSMA2P3-201ENST00000429685 675 ntBASIC3.72□□□□□ -1.81
NPIPA2E9PIF3 UBE2V1P1-201ENST00000430836 445 ntBASIC3.72□□□□□ -1.81
NPIPA2E9PIF3 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.72□□□□□ -1.81
NPIPA2E9PIF3 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
NPIPA2E9PIF3 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC3.72□□□□□ -1.81
NPIPA2E9PIF3 Z95327.1-201ENST00000446082 482 ntBASIC3.72□□□□□ -1.81
NPIPA2E9PIF3 AL133477.1-201ENST00000457472 514 ntBASIC3.72□□□□□ -1.81
NPIPA2E9PIF3 RPL36AP13-201ENST00000457490 317 ntBASIC3.72□□□□□ -1.81
NPIPA2E9PIF3 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC3.72□□□□□ -1.81
NPIPA2E9PIF3 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.72□□□□□ -1.81
NPIPA2E9PIF3 AP000873.1-201ENST00000463987 400 ntBASIC3.72□□□□□ -1.81
NPIPA2E9PIF3 RPS17P11-201ENST00000474297 293 ntBASIC3.72□□□□□ -1.81
NPIPA2E9PIF3 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
NPIPA2E9PIF3 RPL21P129-201ENST00000491732 478 ntBASIC3.72□□□□□ -1.81
NPIPA2E9PIF3 AC110792.1-201ENST00000491826 472 ntBASIC3.72□□□□□ -1.81
NPIPA2E9PIF3 RPL29P14-201ENST00000495837 428 ntBASIC3.72□□□□□ -1.81
NPIPA2E9PIF3 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.72□□□□□ -1.81
NPIPA2E9PIF3 AC017037.1-201ENST00000508460 471 ntBASIC3.72□□□□□ -1.81
NPIPA2E9PIF3 PRELID3BP4-201ENST00000515476 571 ntBASIC3.72□□□□□ -1.81
NPIPA2E9PIF3 RNU1-45P-201ENST00000517191 141 ntBASIC3.72□□□□□ -1.81
NPIPA2E9PIF3 SOD1P3-201ENST00000518682 454 ntBASIC3.72□□□□□ -1.81
NPIPA2E9PIF3 IFITM8P-201ENST00000522529 394 ntBASIC3.72□□□□□ -1.81
NPIPA2E9PIF3 HMGB1P1-201ENST00000522557 636 ntBASIC3.72□□□□□ -1.81
NPIPA2E9PIF3 AF279873.1-201ENST00000523393 313 ntBASIC3.72□□□□□ -1.81
NPIPA2E9PIF3 AC068339.2-201ENST00000534395 618 ntBASIC3.72□□□□□ -1.81
NPIPA2E9PIF3 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC3.72□□□□□ -1.81
NPIPA2E9PIF3 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.72□□□□□ -1.81
NPIPA2E9PIF3 CYB5AP5-201ENST00000549779 389 ntBASIC3.72□□□□□ -1.81
NPIPA2E9PIF3 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC3.72□□□□□ -1.81
NPIPA2E9PIF3 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
NPIPA2E9PIF3 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.72□□□□□ -1.81
NPIPA2E9PIF3 AC023825.1-201ENST00000566704 1030 ntBASIC3.72□□□□□ -1.81
NPIPA2E9PIF3 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.72□□□□□ -1.81
NPIPA2E9PIF3 AC017100.2-201ENST00000584628 355 ntBASIC3.72□□□□□ -1.81
NPIPA2E9PIF3 AC006130.2-201ENST00000586202 326 ntBASIC3.72□□□□□ -1.81
NPIPA2E9PIF3 EIF4A2P1-201ENST00000587313 1063 ntBASIC3.72□□□□□ -1.81
NPIPA2E9PIF3 MIR432-201ENST00000606207 94 ntBASIC3.72□□□□□ -1.81
NPIPA2E9PIF3 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC3.72□□□□□ -1.81
NPIPA2E9PIF3 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
NPIPA2E9PIF3 AL138960.2-201ENST00000625145 535 ntBASIC3.72□□□□□ -1.81
NPIPA2E9PIF3 AC106858.1-201ENST00000637497 429 ntBASIC3.72□□□□□ -1.81
NPIPA2E9PIF3 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
NPIPA2E9PIF3 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
NPIPA2E9PIF3 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
NPIPA2E9PIF3 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
NPIPA2E9PIF3 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
NPIPA2E9PIF3 MAPK10-372ENST00000641954 3413 ntBASIC3.72□□□□□ -1.81
NPIPA2E9PIF3 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC3.71□□□□□ -1.81
NPIPA2E9PIF3 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC3.71□□□□□ -1.81
NPIPA2E9PIF3 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
NPIPA2E9PIF3 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.71□□□□□ -1.82
NPIPA2E9PIF3 CASC19-261ENST00000641853 1638 ntBASIC3.71□□□□□ -1.82
NPIPA2E9PIF3 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
NPIPA2E9PIF3 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
NPIPA2E9PIF3 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
NPIPA2E9PIF3 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.71□□□□□ -1.82
NPIPA2E9PIF3 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
NPIPA2E9PIF3 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
NPIPA2E9PIF3 RNU1-85P-201ENST00000364127 164 ntBASIC3.71□□□□□ -1.82
NPIPA2E9PIF3 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC3.71□□□□□ -1.82
NPIPA2E9PIF3 MIR93-201ENST00000385024 80 ntBASIC3.71□□□□□ -1.82
NPIPA2E9PIF3 UQCRFS1P3-201ENST00000407697 385 ntBASIC3.71□□□□□ -1.82
NPIPA2E9PIF3 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC3.71□□□□□ -1.82
NPIPA2E9PIF3 HSPE1P12-201ENST00000412576 301 ntBASIC3.71□□□□□ -1.82
NPIPA2E9PIF3 TPT1P2-201ENST00000413105 503 ntBASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms