Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 AL121972.1-201ENST00000402023 252 ntBASIC3.51□□□□□ -1.85
SRRM4A7MD48 AL024474.1-201ENST00000404655 591 ntBASIC3.51□□□□□ -1.85
SRRM4A7MD48 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC3.51□□□□□ -1.85
SRRM4A7MD48 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SRRM4A7MD48 HMGB1P49-201ENST00000418882 569 ntBASIC3.51□□□□□ -1.85
SRRM4A7MD48 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC3.51□□□□□ -1.85
SRRM4A7MD48 USP12PY-201ENST00000427677 1064 ntBASIC3.51□□□□□ -1.85
SRRM4A7MD48 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC3.51□□□□□ -1.85
SRRM4A7MD48 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC3.51□□□□□ -1.85
SRRM4A7MD48 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC3.51□□□□□ -1.85
SRRM4A7MD48 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC3.51□□□□□ -1.85
SRRM4A7MD48 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC3.51□□□□□ -1.85
SRRM4A7MD48 AC073264.2-201ENST00000448886 166 ntBASIC3.51□□□□□ -1.85
SRRM4A7MD48 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC3.51□□□□□ -1.85
SRRM4A7MD48 AL009048.1-201ENST00000450437 298 ntBASIC3.51□□□□□ -1.85
SRRM4A7MD48 ABCF2P2-201ENST00000450549 296 ntBASIC3.51□□□□□ -1.85
SRRM4A7MD48 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC3.51□□□□□ -1.85
SRRM4A7MD48 DHFRP3-201ENST00000455595 559 ntBASIC3.51□□□□□ -1.85
SRRM4A7MD48 AC025445.1-201ENST00000502728 300 ntBASIC3.51□□□□□ -1.85
SRRM4A7MD48 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC3.51□□□□□ -1.85
SRRM4A7MD48 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
SRRM4A7MD48 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
SRRM4A7MD48 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
SRRM4A7MD48 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.51□□□□□ -1.85
SRRM4A7MD48 HIGD1AP3-201ENST00000515857 278 ntBASIC3.51□□□□□ -1.85
SRRM4A7MD48 RNA5SP154-201ENST00000516193 111 ntBASIC3.51□□□□□ -1.85
SRRM4A7MD48 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC3.51□□□□□ -1.85
SRRM4A7MD48 PHBP17-201ENST00000528576 541 ntBASIC3.51□□□□□ -1.85
SRRM4A7MD48 AP003385.6-201ENST00000531603 374 ntBASIC3.51□□□□□ -1.85
SRRM4A7MD48 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
SRRM4A7MD48 AC008127.2-201ENST00000549925 1075 ntBASIC3.51□□□□□ -1.85
SRRM4A7MD48 MTND1P24-201ENST00000552175 861 ntBASIC3.51□□□□□ -1.85
SRRM4A7MD48 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC3.51□□□□□ -1.85
SRRM4A7MD48 AC051619.2-201ENST00000559063 397 ntBASIC3.51□□□□□ -1.85
SRRM4A7MD48 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.51□□□□□ -1.85
SRRM4A7MD48 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.51□□□□□ -1.85
SRRM4A7MD48 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC3.51□□□□□ -1.85
SRRM4A7MD48 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC3.51□□□□□ -1.85
SRRM4A7MD48 AC006116.5-201ENST00000591936 559 ntBASIC3.51□□□□□ -1.85
SRRM4A7MD48 AC008782.1-201ENST00000603386 430 ntBASIC3.51□□□□□ -1.85
SRRM4A7MD48 AL357094.1-201ENST00000603845 844 ntBASIC3.51□□□□□ -1.85
SRRM4A7MD48 AC115286.1-201ENST00000604298 434 ntBASIC3.51□□□□□ -1.85
SRRM4A7MD48 IGHV3-29-201ENST00000604817 344 ntBASIC3.51□□□□□ -1.85
SRRM4A7MD48 BX323046.1-201ENST00000610145 535 ntBASIC3.51□□□□□ -1.85
SRRM4A7MD48 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC3.51□□□□□ -1.85
SRRM4A7MD48 AC048344.4-201ENST00000619744 527 ntBASIC3.51□□□□□ -1.85
SRRM4A7MD48 AP005019.3-201ENST00000620418 560 ntBASIC3.51□□□□□ -1.85
SRRM4A7MD48 AL023881.1-201ENST00000621088 301 ntBASIC3.51□□□□□ -1.85
SRRM4A7MD48 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC3.51□□□□□ -1.85
SRRM4A7MD48 FP325313.1-201ENST00000638228 703 ntBASIC3.51□□□□□ -1.85
SRRM4A7MD48 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
SRRM4A7MD48 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC3.51□□□□□ -1.85
SRRM4A7MD48 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
SRRM4A7MD48 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SRRM4A7MD48 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.51□□□□□ -1.85
SRRM4A7MD48 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC3.51□□□□□ -1.85
SRRM4A7MD48 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC3.5□□□□□ -1.85
SRRM4A7MD48 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
SRRM4A7MD48 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
SRRM4A7MD48 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
SRRM4A7MD48 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
SRRM4A7MD48 RNU6-216P-201ENST00000363282 104 ntBASIC3.5□□□□□ -1.85
SRRM4A7MD48 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC3.5□□□□□ -1.85
SRRM4A7MD48 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.5□□□□□ -1.85
SRRM4A7MD48 Y_RNA.465-201ENST00000384293 102 ntBASIC3.5□□□□□ -1.85
SRRM4A7MD48 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
SRRM4A7MD48 TAF9BP1-201ENST00000396646 746 ntBASIC3.5□□□□□ -1.85
SRRM4A7MD48 AL590084.1-201ENST00000407885 387 ntBASIC3.5□□□□□ -1.85
SRRM4A7MD48 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.5□□□□□ -1.85
SRRM4A7MD48 AL139128.1-201ENST00000413921 941 ntBASIC3.5□□□□□ -1.85
SRRM4A7MD48 LUZP4P1-201ENST00000415420 344 ntBASIC3.5□□□□□ -1.85
SRRM4A7MD48 TMSB10P2-201ENST00000416049 131 ntBASIC3.5□□□□□ -1.85
SRRM4A7MD48 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC3.5□□□□□ -1.85
SRRM4A7MD48 KRR1P1-201ENST00000419430 803 ntBASIC3.5□□□□□ -1.85
SRRM4A7MD48 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.5□□□□□ -1.85
SRRM4A7MD48 AC005517.2-201ENST00000424673 553 ntBASIC3.5□□□□□ -1.85
SRRM4A7MD48 RPL7P44-201ENST00000424827 742 ntBASIC3.5□□□□□ -1.85
SRRM4A7MD48 BRWD1P3-201ENST00000428816 390 ntBASIC3.5□□□□□ -1.85
SRRM4A7MD48 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC3.5□□□□□ -1.85
SRRM4A7MD48 ELOCP18-201ENST00000434209 337 ntBASIC3.5□□□□□ -1.85
SRRM4A7MD48 ARL2BPP10-201ENST00000446487 531 ntBASIC3.5□□□□□ -1.85
SRRM4A7MD48 AC104073.1-201ENST00000451988 151 ntBASIC3.5□□□□□ -1.85
SRRM4A7MD48 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.5□□□□□ -1.85
SRRM4A7MD48 RPL7P22-201ENST00000466005 733 ntBASIC3.5□□□□□ -1.85
SRRM4A7MD48 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC3.5□□□□□ -1.85
SRRM4A7MD48 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC3.5□□□□□ -1.85
SRRM4A7MD48 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC3.5□□□□□ -1.85
SRRM4A7MD48 AC006499.6-201ENST00000511169 607 ntBASIC3.5□□□□□ -1.85
SRRM4A7MD48 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC3.5□□□□□ -1.85
SRRM4A7MD48 AC109445.1-201ENST00000512356 383 ntBASIC3.5□□□□□ -1.85
SRRM4A7MD48 AC005798.1-201ENST00000513715 387 ntBASIC3.5□□□□□ -1.85
SRRM4A7MD48 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC3.5□□□□□ -1.85
SRRM4A7MD48 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
SRRM4A7MD48 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
SRRM4A7MD48 DYNLL1P4-201ENST00000549314 266 ntBASIC3.5□□□□□ -1.85
SRRM4A7MD48 AL352979.3-201ENST00000553515 247 ntBASIC3.5□□□□□ -1.85
SRRM4A7MD48 CFL2-206ENST00000556161 546 ntTSL 4 BASIC3.5□□□□□ -1.85
SRRM4A7MD48 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC3.5□□□□□ -1.85
SRRM4A7MD48 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC3.5□□□□□ -1.85
SRRM4A7MD48 AC138915.2-201ENST00000569776 97 ntBASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms