Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 TXNP6-201ENST00000510190 310 ntBASIC2.92□□□□□ -1.94
TRAV27A0A087WT01 RNU4ATAC15P-201ENST00000516415 126 ntBASIC2.92□□□□□ -1.94
TRAV27A0A087WT01 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC2.92□□□□□ -1.94
TRAV27A0A087WT01 AC068657.1-201ENST00000520807 306 ntBASIC2.92□□□□□ -1.94
TRAV27A0A087WT01 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC2.92□□□□□ -1.94
TRAV27A0A087WT01 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC2.92□□□□□ -1.94
TRAV27A0A087WT01 MIR5047-201ENST00000579212 100 ntBASIC2.92□□□□□ -1.94
TRAV27A0A087WT01 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC2.92□□□□□ -1.94
TRAV27A0A087WT01 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC2.92□□□□□ -1.94
TRAV27A0A087WT01 AC005229.3-201ENST00000603438 323 ntBASIC2.92□□□□□ -1.94
TRAV27A0A087WT01 AC096586.2-201ENST00000610260 441 ntBASIC2.92□□□□□ -1.94
TRAV27A0A087WT01 AL157817.1-201ENST00000614264 790 ntBASIC2.92□□□□□ -1.94
TRAV27A0A087WT01 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC2.92□□□□□ -1.94
TRAV27A0A087WT01 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
TRAV27A0A087WT01 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
TRAV27A0A087WT01 AC017002.4-201ENST00000604721 1525 ntBASIC2.92□□□□□ -1.94
TRAV27A0A087WT01 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
TRAV27A0A087WT01 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC2.92□□□□□ -1.94
TRAV27A0A087WT01 MTND5P24-201ENST00000438892 1767 ntBASIC2.92□□□□□ -1.94
TRAV27A0A087WT01 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC2.92□□□□□ -1.94
TRAV27A0A087WT01 SEPT7P7-201ENST00000420492 1301 ntBASIC2.92□□□□□ -1.94
TRAV27A0A087WT01 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
TRAV27A0A087WT01 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
TRAV27A0A087WT01 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
TRAV27A0A087WT01 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC2.91□□□□□ -1.94
TRAV27A0A087WT01 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
TRAV27A0A087WT01 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC2.91□□□□□ -1.94
TRAV27A0A087WT01 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
TRAV27A0A087WT01 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC2.91□□□□□ -1.94
TRAV27A0A087WT01 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC2.91□□□□□ -1.94
TRAV27A0A087WT01 AC138393.1-206ENST00000540997 1886 ntBASIC2.91□□□□□ -1.94
TRAV27A0A087WT01 MIR148B-201ENST00000362252 99 ntBASIC2.91□□□□□ -1.94
TRAV27A0A087WT01 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
TRAV27A0A087WT01 AC007899.1-201ENST00000412776 775 ntBASIC2.91□□□□□ -1.94
TRAV27A0A087WT01 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC2.91□□□□□ -1.94
TRAV27A0A087WT01 ARF4P2-201ENST00000430209 526 ntBASIC2.91□□□□□ -1.94
TRAV27A0A087WT01 USP9YP31-201ENST00000431405 881 ntBASIC2.91□□□□□ -1.94
TRAV27A0A087WT01 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC2.91□□□□□ -1.94
TRAV27A0A087WT01 TVP23BP2-201ENST00000455082 615 ntBASIC2.91□□□□□ -1.94
TRAV27A0A087WT01 CFTRP1-201ENST00000456646 183 ntBASIC2.91□□□□□ -1.94
TRAV27A0A087WT01 HNRNPDLP3-201ENST00000456745 380 ntBASIC2.91□□□□□ -1.94
TRAV27A0A087WT01 RPS27P29-201ENST00000463110 252 ntBASIC2.91□□□□□ -1.94
TRAV27A0A087WT01 AC010683.1-201ENST00000473673 378 ntBASIC2.91□□□□□ -1.94
TRAV27A0A087WT01 AC010627.1-201ENST00000503819 1294 ntBASIC2.91□□□□□ -1.94
TRAV27A0A087WT01 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC2.91□□□□□ -1.94
TRAV27A0A087WT01 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC2.91□□□□□ -1.94
TRAV27A0A087WT01 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC2.91□□□□□ -1.94
TRAV27A0A087WT01 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC2.91□□□□□ -1.94
TRAV27A0A087WT01 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC2.91□□□□□ -1.94
TRAV27A0A087WT01 MTCO1P49-201ENST00000523429 802 ntBASIC2.91□□□□□ -1.94
TRAV27A0A087WT01 MTND5P21-201ENST00000531961 522 ntBASIC2.91□□□□□ -1.94
TRAV27A0A087WT01 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC2.91□□□□□ -1.94
TRAV27A0A087WT01 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC2.91□□□□□ -1.94
TRAV27A0A087WT01 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC2.91□□□□□ -1.94
TRAV27A0A087WT01 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC2.91□□□□□ -1.94
TRAV27A0A087WT01 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC2.91□□□□□ -1.94
TRAV27A0A087WT01 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC2.91□□□□□ -1.94
TRAV27A0A087WT01 AC007423.1-201ENST00000605009 627 ntBASIC2.91□□□□□ -1.94
TRAV27A0A087WT01 AC010680.4-201ENST00000605334 543 ntBASIC2.91□□□□□ -1.94
TRAV27A0A087WT01 U3.45-201ENST00000607547 219 ntBASIC2.91□□□□□ -1.94
TRAV27A0A087WT01 AL591516.1-201ENST00000611326 274 ntBASIC2.91□□□□□ -1.94
TRAV27A0A087WT01 AL731566.2-201ENST00000618971 317 ntBASIC2.91□□□□□ -1.94
TRAV27A0A087WT01 TEX41-300ENST00000631048 69 ntTSL 5 BASIC2.91□□□□□ -1.94
TRAV27A0A087WT01 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC2.91□□□□□ -1.94
TRAV27A0A087WT01 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC2.91□□□□□ -1.94
TRAV27A0A087WT01 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC2.91□□□□□ -1.94
TRAV27A0A087WT01 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC2.91□□□□□ -1.94
TRAV27A0A087WT01 AF117829.1-206ENST00000621883 3802 ntBASIC2.91□□□□□ -1.94
TRAV27A0A087WT01 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC2.9□□□□□ -1.94
TRAV27A0A087WT01 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
TRAV27A0A087WT01 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC2.9□□□□□ -1.94
TRAV27A0A087WT01 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
TRAV27A0A087WT01 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
TRAV27A0A087WT01 Y_RNA.126-201ENST00000363382 111 ntBASIC2.9□□□□□ -1.95
TRAV27A0A087WT01 RNA5SP50-201ENST00000363731 107 ntBASIC2.9□□□□□ -1.95
TRAV27A0A087WT01 OR6K3-202ENST00000368146 996 ntBASIC2.9□□□□□ -1.95
TRAV27A0A087WT01 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
TRAV27A0A087WT01 RNU6-225P-201ENST00000384613 103 ntBASIC2.9□□□□□ -1.95
TRAV27A0A087WT01 MIR124-3-201ENST00000384866 87 ntBASIC2.9□□□□□ -1.95
TRAV27A0A087WT01 HMGN1P24-201ENST00000412282 298 ntBASIC2.9□□□□□ -1.95
TRAV27A0A087WT01 HMGB3P23-201ENST00000414981 585 ntBASIC2.9□□□□□ -1.95
TRAV27A0A087WT01 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.9□□□□□ -1.95
TRAV27A0A087WT01 AC063979.1-201ENST00000415539 377 ntBASIC2.9□□□□□ -1.95
TRAV27A0A087WT01 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC2.9□□□□□ -1.95
TRAV27A0A087WT01 RPL23AP4-201ENST00000427757 463 ntBASIC2.9□□□□□ -1.95
TRAV27A0A087WT01 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC2.9□□□□□ -1.95
TRAV27A0A087WT01 AL157884.3-201ENST00000448273 1184 ntBASIC2.9□□□□□ -1.95
TRAV27A0A087WT01 HMGB3P8-201ENST00000449709 577 ntBASIC2.9□□□□□ -1.95
TRAV27A0A087WT01 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC2.9□□□□□ -1.95
TRAV27A0A087WT01 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC2.9□□□□□ -1.95
TRAV27A0A087WT01 AC091564.1-201ENST00000464563 479 ntBASIC2.9□□□□□ -1.95
TRAV27A0A087WT01 ST13P14-201ENST00000474095 734 ntBASIC2.9□□□□□ -1.95
TRAV27A0A087WT01 AC078785.3-201ENST00000476607 425 ntBASIC2.9□□□□□ -1.95
TRAV27A0A087WT01 AL049830.2-201ENST00000480072 201 ntBASIC2.9□□□□□ -1.95
TRAV27A0A087WT01 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC2.9□□□□□ -1.95
TRAV27A0A087WT01 AL133372.1-201ENST00000493565 745 ntBASIC2.9□□□□□ -1.95
TRAV27A0A087WT01 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC2.9□□□□□ -1.95
TRAV27A0A087WT01 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC2.9□□□□□ -1.95
TRAV27A0A087WT01 KCTD9P5-201ENST00000504141 1170 ntBASIC2.9□□□□□ -1.95
TRAV27A0A087WT01 PDLIM1P4-201ENST00000504327 1006 ntBASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms