Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC6.1□□□□□ -1.43
HRH3Q9Y5N1 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC6.1□□□□□ -1.43
HRH3Q9Y5N1 AC018889.1-201ENST00000605372 397 ntBASIC6.1□□□□□ -1.43
HRH3Q9Y5N1 AL049794.2-201ENST00000616301 365 ntBASIC6.1□□□□□ -1.43
HRH3Q9Y5N1 AC103705.1-201ENST00000619013 241 ntBASIC6.1□□□□□ -1.43
HRH3Q9Y5N1 AC241377.1-201ENST00000619797 406 ntBASIC6.1□□□□□ -1.43
HRH3Q9Y5N1 AC010168.2-201ENST00000562691 5428 ntBASIC6.1□□□□□ -1.43
HRH3Q9Y5N1 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
HRH3Q9Y5N1 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HRH3Q9Y5N1 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC6.1□□□□□ -1.43
HRH3Q9Y5N1 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HRH3Q9Y5N1 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC6.1□□□□□ -1.43
HRH3Q9Y5N1 ATP5A1P4-201ENST00000556888 1605 ntBASIC6.1□□□□□ -1.43
HRH3Q9Y5N1 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC6.1□□□□□ -1.43
HRH3Q9Y5N1 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
HRH3Q9Y5N1 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
HRH3Q9Y5N1 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
HRH3Q9Y5N1 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC6.09□□□□□ -1.43
HRH3Q9Y5N1 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
HRH3Q9Y5N1 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
HRH3Q9Y5N1 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
HRH3Q9Y5N1 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
HRH3Q9Y5N1 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
HRH3Q9Y5N1 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
HRH3Q9Y5N1 RNA5SP321-201ENST00000362722 111 ntBASIC6.09□□□□□ -1.43
HRH3Q9Y5N1 RNA5SP65-201ENST00000363166 119 ntBASIC6.09□□□□□ -1.43
HRH3Q9Y5N1 SNORD115-7-201ENST00000365306 82 ntBASIC6.09□□□□□ -1.43
HRH3Q9Y5N1 RNU1-115P-201ENST00000365329 160 ntBASIC6.09□□□□□ -1.43
HRH3Q9Y5N1 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
HRH3Q9Y5N1 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC6.09□□□□□ -1.43
HRH3Q9Y5N1 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC6.09□□□□□ -1.43
HRH3Q9Y5N1 E2F6P2-201ENST00000420708 748 ntBASIC6.09□□□□□ -1.43
HRH3Q9Y5N1 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC6.09□□□□□ -1.43
HRH3Q9Y5N1 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC6.09□□□□□ -1.43
HRH3Q9Y5N1 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC6.09□□□□□ -1.43
HRH3Q9Y5N1 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC6.09□□□□□ -1.43
HRH3Q9Y5N1 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC6.09□□□□□ -1.43
HRH3Q9Y5N1 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC6.09□□□□□ -1.43
HRH3Q9Y5N1 TIMM8BP2-201ENST00000445940 251 ntBASIC6.09□□□□□ -1.43
HRH3Q9Y5N1 AC006967.1-201ENST00000467608 589 ntBASIC6.09□□□□□ -1.43
HRH3Q9Y5N1 TRBV1-201ENST00000476502 284 ntBASIC6.09□□□□□ -1.43
HRH3Q9Y5N1 RPL7AP23-201ENST00000482625 776 ntBASIC6.09□□□□□ -1.43
HRH3Q9Y5N1 RN7SL561P-201ENST00000488553 281 ntBASIC6.09□□□□□ -1.43
HRH3Q9Y5N1 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC6.09□□□□□ -1.43
HRH3Q9Y5N1 RNU6-470P-201ENST00000515954 104 ntBASIC6.09□□□□□ -1.43
HRH3Q9Y5N1 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC6.09□□□□□ -1.43
HRH3Q9Y5N1 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC6.09□□□□□ -1.43
HRH3Q9Y5N1 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
HRH3Q9Y5N1 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC6.09□□□□□ -1.43
HRH3Q9Y5N1 AC011921.2-201ENST00000589465 152 ntBASIC6.09□□□□□ -1.43
HRH3Q9Y5N1 AC104695.3-201ENST00000604052 296 ntBASIC6.09□□□□□ -1.43
HRH3Q9Y5N1 AC078938.1-201ENST00000620993 318 ntBASIC6.09□□□□□ -1.43
HRH3Q9Y5N1 AL353662.3-201ENST00000625131 237 ntBASIC6.09□□□□□ -1.43
HRH3Q9Y5N1 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
HRH3Q9Y5N1 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC6.09□□□□□ -1.43
HRH3Q9Y5N1 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
HRH3Q9Y5N1 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC6.09□□□□□ -1.43
HRH3Q9Y5N1 AC011755.1-201ENST00000623763 2049 ntBASIC6.09□□□□□ -1.43
HRH3Q9Y5N1 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
HRH3Q9Y5N1 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.44
HRH3Q9Y5N1 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
HRH3Q9Y5N1 AC018628.1-201ENST00000624147 3819 ntBASIC6.09□□□□□ -1.44
HRH3Q9Y5N1 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
HRH3Q9Y5N1 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
HRH3Q9Y5N1 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
HRH3Q9Y5N1 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
HRH3Q9Y5N1 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HRH3Q9Y5N1 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC6.08□□□□□ -1.44
HRH3Q9Y5N1 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC6.08□□□□□ -1.44
HRH3Q9Y5N1 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC6.08□□□□□ -1.44
HRH3Q9Y5N1 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
HRH3Q9Y5N1 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HRH3Q9Y5N1 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
HRH3Q9Y5N1 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC6.08□□□□□ -1.44
HRH3Q9Y5N1 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HRH3Q9Y5N1 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
HRH3Q9Y5N1 AC235565.1-201ENST00000456962 1325 ntBASIC6.08□□□□□ -1.44
HRH3Q9Y5N1 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC6.08□□□□□ -1.44
HRH3Q9Y5N1 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
HRH3Q9Y5N1 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
HRH3Q9Y5N1 TPTE2P4-201ENST00000258589 1605 ntBASIC6.08□□□□□ -1.44
HRH3Q9Y5N1 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HRH3Q9Y5N1 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC6.08□□□□□ -1.44
HRH3Q9Y5N1 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC6.08□□□□□ -1.44
HRH3Q9Y5N1 RNA5SP512-201ENST00000364550 120 ntBASIC6.08□□□□□ -1.44
HRH3Q9Y5N1 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC6.08□□□□□ -1.44
HRH3Q9Y5N1 U3.52-201ENST00000384034 216 ntBASIC6.08□□□□□ -1.44
HRH3Q9Y5N1 RNU6-1050P-201ENST00000410388 107 ntBASIC6.08□□□□□ -1.44
HRH3Q9Y5N1 RNU6-387P-201ENST00000411331 105 ntBASIC6.08□□□□□ -1.44
HRH3Q9Y5N1 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
HRH3Q9Y5N1 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC6.08□□□□□ -1.44
HRH3Q9Y5N1 RPL7P46-201ENST00000425129 740 ntBASIC6.08□□□□□ -1.44
HRH3Q9Y5N1 AC234779.1-201ENST00000425910 285 ntBASIC6.08□□□□□ -1.44
HRH3Q9Y5N1 AC092651.1-201ENST00000426110 312 ntBASIC6.08□□□□□ -1.44
HRH3Q9Y5N1 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC6.08□□□□□ -1.44
HRH3Q9Y5N1 AC105402.2-201ENST00000438503 358 ntBASIC6.08□□□□□ -1.44
HRH3Q9Y5N1 ATP6V1E1P1-201ENST00000439215 681 ntBASIC6.08□□□□□ -1.44
HRH3Q9Y5N1 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC6.08□□□□□ -1.44
HRH3Q9Y5N1 LAMTOR5P1-201ENST00000444290 270 ntBASIC6.08□□□□□ -1.44
HRH3Q9Y5N1 PCNPP5-201ENST00000452246 481 ntBASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms