Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC4.12□□□□□ -1.75
PCDHGA1Q9Y5H4 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC4.12□□□□□ -1.75
PCDHGA1Q9Y5H4 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC4.12□□□□□ -1.75
PCDHGA1Q9Y5H4 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC4.12□□□□□ -1.75
PCDHGA1Q9Y5H4 AC008687.2-201ENST00000597865 520 ntBASIC4.12□□□□□ -1.75
PCDHGA1Q9Y5H4 AL009028.1-201ENST00000604895 802 ntBASIC4.12□□□□□ -1.75
PCDHGA1Q9Y5H4 AC105227.2-201ENST00000615075 605 ntBASIC4.12□□□□□ -1.75
PCDHGA1Q9Y5H4 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
PCDHGA1Q9Y5H4 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC4.12□□□□□ -1.75
PCDHGA1Q9Y5H4 AL590396.4-201ENST00000636779 956 ntBASIC4.12□□□□□ -1.75
PCDHGA1Q9Y5H4 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
PCDHGA1Q9Y5H4 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.12□□□□□ -1.75
PCDHGA1Q9Y5H4 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.12□□□□□ -1.75
PCDHGA1Q9Y5H4 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
PCDHGA1Q9Y5H4 ELL2P4-201ENST00000446870 1376 ntBASIC4.12□□□□□ -1.75
PCDHGA1Q9Y5H4 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
PCDHGA1Q9Y5H4 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
PCDHGA1Q9Y5H4 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
PCDHGA1Q9Y5H4 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
PCDHGA1Q9Y5H4 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
PCDHGA1Q9Y5H4 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
PCDHGA1Q9Y5H4 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
PCDHGA1Q9Y5H4 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
PCDHGA1Q9Y5H4 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
PCDHGA1Q9Y5H4 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
PCDHGA1Q9Y5H4 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.11□□□□□ -1.75
PCDHGA1Q9Y5H4 RNU1-20P-201ENST00000363314 162 ntBASIC4.11□□□□□ -1.75
PCDHGA1Q9Y5H4 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
PCDHGA1Q9Y5H4 RNU6-444P-201ENST00000383988 108 ntBASIC4.11□□□□□ -1.75
PCDHGA1Q9Y5H4 SNORA74C-2-201ENST00000411179 201 ntBASIC4.11□□□□□ -1.75
PCDHGA1Q9Y5H4 VDAC1P9-201ENST00000412766 841 ntBASIC4.11□□□□□ -1.75
PCDHGA1Q9Y5H4 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.11□□□□□ -1.75
PCDHGA1Q9Y5H4 OR2X1P-201ENST00000421144 687 ntBASIC4.11□□□□□ -1.75
PCDHGA1Q9Y5H4 DNAJA1P1-201ENST00000425106 1187 ntBASIC4.11□□□□□ -1.75
PCDHGA1Q9Y5H4 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC4.11□□□□□ -1.75
PCDHGA1Q9Y5H4 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.11□□□□□ -1.75
PCDHGA1Q9Y5H4 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC4.11□□□□□ -1.75
PCDHGA1Q9Y5H4 AL356276.2-201ENST00000435919 558 ntBASIC4.11□□□□□ -1.75
PCDHGA1Q9Y5H4 RPS29P7-201ENST00000439662 171 ntBASIC4.11□□□□□ -1.75
PCDHGA1Q9Y5H4 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
PCDHGA1Q9Y5H4 DDX39BP2-208ENST00000453923 258 ntBASIC4.11□□□□□ -1.75
PCDHGA1Q9Y5H4 AC087879.1-201ENST00000474343 374 ntBASIC4.11□□□□□ -1.75
PCDHGA1Q9Y5H4 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC4.11□□□□□ -1.75
PCDHGA1Q9Y5H4 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC4.11□□□□□ -1.75
PCDHGA1Q9Y5H4 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC4.11□□□□□ -1.75
PCDHGA1Q9Y5H4 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
PCDHGA1Q9Y5H4 AC119751.1-201ENST00000513357 765 ntBASIC4.11□□□□□ -1.75
PCDHGA1Q9Y5H4 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.11□□□□□ -1.75
PCDHGA1Q9Y5H4 CYB5AP5-201ENST00000549779 389 ntBASIC4.11□□□□□ -1.75
PCDHGA1Q9Y5H4 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC4.11□□□□□ -1.75
PCDHGA1Q9Y5H4 AC004217.3-201ENST00000551552 878 ntBASIC4.11□□□□□ -1.75
PCDHGA1Q9Y5H4 CYP2C60P-201ENST00000566088 139 ntBASIC4.11□□□□□ -1.75
PCDHGA1Q9Y5H4 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC4.11□□□□□ -1.75
PCDHGA1Q9Y5H4 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC4.11□□□□□ -1.75
PCDHGA1Q9Y5H4 AC090181.2-201ENST00000602975 672 ntBASIC4.11□□□□□ -1.75
PCDHGA1Q9Y5H4 AC009948.4-201ENST00000604692 675 ntBASIC4.11□□□□□ -1.75
PCDHGA1Q9Y5H4 AL049634.3-201ENST00000604968 457 ntBASIC4.11□□□□□ -1.75
PCDHGA1Q9Y5H4 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.11□□□□□ -1.75
PCDHGA1Q9Y5H4 AC039056.2-201ENST00000622261 511 ntBASIC4.11□□□□□ -1.75
PCDHGA1Q9Y5H4 AC091905.2-201ENST00000623143 306 ntBASIC4.11□□□□□ -1.75
PCDHGA1Q9Y5H4 AC004777.1-201ENST00000624317 287 ntBASIC4.11□□□□□ -1.75
PCDHGA1Q9Y5H4 AC126544.2-201ENST00000625174 749 ntBASIC4.11□□□□□ -1.75
PCDHGA1Q9Y5H4 AL356118.1-201ENST00000635272 1078 ntBASIC4.11□□□□□ -1.75
PCDHGA1Q9Y5H4 AC138649.5-201ENST00000637456 137 ntBASIC4.11□□□□□ -1.75
PCDHGA1Q9Y5H4 FP325313.1-201ENST00000638228 703 ntBASIC4.11□□□□□ -1.75
PCDHGA1Q9Y5H4 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.11□□□□□ -1.75
PCDHGA1Q9Y5H4 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
PCDHGA1Q9Y5H4 SEPT7P7-201ENST00000420492 1301 ntBASIC4.11□□□□□ -1.75
PCDHGA1Q9Y5H4 AL627171.1-201ENST00000618845 1308 ntBASIC4.11□□□□□ -1.75
PCDHGA1Q9Y5H4 AC011266.1-201ENST00000624119 3569 ntBASIC4.11□□□□□ -1.75
PCDHGA1Q9Y5H4 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
PCDHGA1Q9Y5H4 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC4.11□□□□□ -1.75
PCDHGA1Q9Y5H4 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.11□□□□□ -1.75
PCDHGA1Q9Y5H4 SGO1P1-201ENST00000603525 1447 ntBASIC4.11□□□□□ -1.75
PCDHGA1Q9Y5H4 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.11□□□□□ -1.75
PCDHGA1Q9Y5H4 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.1□□□□□ -1.75
PCDHGA1Q9Y5H4 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
PCDHGA1Q9Y5H4 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC4.1□□□□□ -1.75
PCDHGA1Q9Y5H4 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.1□□□□□ -1.75
PCDHGA1Q9Y5H4 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.1□□□□□ -1.75
PCDHGA1Q9Y5H4 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4.1□□□□□ -1.75
PCDHGA1Q9Y5H4 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
PCDHGA1Q9Y5H4 SNORA71.3-201ENST00000362582 128 ntBASIC4.1□□□□□ -1.75
PCDHGA1Q9Y5H4 RNU5B-1-201ENST00000363286 116 ntBASIC4.1□□□□□ -1.75
PCDHGA1Q9Y5H4 SNORD46.1-201ENST00000364139 104 ntBASIC4.1□□□□□ -1.75
PCDHGA1Q9Y5H4 RNA5SP167-201ENST00000365461 116 ntBASIC4.1□□□□□ -1.75
PCDHGA1Q9Y5H4 RNU6-1000P-201ENST00000391066 106 ntBASIC4.1□□□□□ -1.75
PCDHGA1Q9Y5H4 MIR921-201ENST00000401133 56 ntBASIC4.1□□□□□ -1.75
PCDHGA1Q9Y5H4 AL160275.2-201ENST00000412010 394 ntBASIC4.1□□□□□ -1.75
PCDHGA1Q9Y5H4 OR51A3P-201ENST00000413596 924 ntBASIC4.1□□□□□ -1.75
PCDHGA1Q9Y5H4 RPS3AP9-201ENST00000417027 792 ntBASIC4.1□□□□□ -1.75
PCDHGA1Q9Y5H4 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.1□□□□□ -1.75
PCDHGA1Q9Y5H4 PAICSP7-201ENST00000419829 962 ntBASIC4.1□□□□□ -1.75
PCDHGA1Q9Y5H4 AC233981.1-201ENST00000423224 461 ntBASIC4.1□□□□□ -1.75
PCDHGA1Q9Y5H4 RPL21P91-201ENST00000429231 479 ntBASIC4.1□□□□□ -1.75
PCDHGA1Q9Y5H4 GCA-203ENST00000429691 824 ntTSL 3 BASIC4.1□□□□□ -1.75
PCDHGA1Q9Y5H4 MTCO1P54-201ENST00000430139 712 ntBASIC4.1□□□□□ -1.75
PCDHGA1Q9Y5H4 HSFY7P-201ENST00000432672 318 ntBASIC4.1□□□□□ -1.75
PCDHGA1Q9Y5H4 HSFY8P-201ENST00000437934 318 ntBASIC4.1□□□□□ -1.75
PCDHGA1Q9Y5H4 RPL23AP46-201ENST00000438548 490 ntBASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms