Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.04□□□□□ -1.6
PCDHGA3Q9Y5H0 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC5.04□□□□□ -1.6
PCDHGA3Q9Y5H0 MTND4P16-201ENST00000466108 1367 ntBASIC5.04□□□□□ -1.6
PCDHGA3Q9Y5H0 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
PCDHGA3Q9Y5H0 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
PCDHGA3Q9Y5H0 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PCDHGA3Q9Y5H0 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PCDHGA3Q9Y5H0 AL672167.1-205ENST00000641112 3080 ntBASIC5.04□□□□□ -1.6
PCDHGA3Q9Y5H0 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.04□□□□□ -1.6
PCDHGA3Q9Y5H0 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
PCDHGA3Q9Y5H0 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC5.04□□□□□ -1.6
PCDHGA3Q9Y5H0 SNURFL-201ENST00000309296 343 ntBASIC5.04□□□□□ -1.6
PCDHGA3Q9Y5H0 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
PCDHGA3Q9Y5H0 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
PCDHGA3Q9Y5H0 RNU6-878P-201ENST00000384578 110 ntBASIC5.04□□□□□ -1.6
PCDHGA3Q9Y5H0 RNU6-648P-201ENST00000410190 107 ntBASIC5.04□□□□□ -1.6
PCDHGA3Q9Y5H0 RN7SKP56-201ENST00000410513 331 ntBASIC5.04□□□□□ -1.6
PCDHGA3Q9Y5H0 AC109780.2-201ENST00000413467 845 ntBASIC5.04□□□□□ -1.6
PCDHGA3Q9Y5H0 RPL21P108-201ENST00000413857 481 ntBASIC5.04□□□□□ -1.6
PCDHGA3Q9Y5H0 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC5.04□□□□□ -1.6
PCDHGA3Q9Y5H0 CDK8P2-201ENST00000415020 547 ntBASIC5.04□□□□□ -1.6
PCDHGA3Q9Y5H0 AC012065.2-201ENST00000421295 375 ntBASIC5.04□□□□□ -1.6
PCDHGA3Q9Y5H0 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC5.04□□□□□ -1.6
PCDHGA3Q9Y5H0 DDX39BP1-205ENST00000422507 192 ntBASIC5.04□□□□□ -1.6
PCDHGA3Q9Y5H0 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC5.04□□□□□ -1.6
PCDHGA3Q9Y5H0 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC5.04□□□□□ -1.6
PCDHGA3Q9Y5H0 MUPP-201ENST00000438111 566 ntBASIC5.04□□□□□ -1.6
PCDHGA3Q9Y5H0 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC5.04□□□□□ -1.6
PCDHGA3Q9Y5H0 AC239367.2-201ENST00000447309 705 ntBASIC5.04□□□□□ -1.6
PCDHGA3Q9Y5H0 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC5.04□□□□□ -1.6
PCDHGA3Q9Y5H0 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC5.04□□□□□ -1.6
PCDHGA3Q9Y5H0 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
PCDHGA3Q9Y5H0 AC087312.1-201ENST00000471411 480 ntBASIC5.04□□□□□ -1.6
PCDHGA3Q9Y5H0 AP000797.1-201ENST00000478870 387 ntBASIC5.04□□□□□ -1.6
PCDHGA3Q9Y5H0 PRELID3BP7-201ENST00000503606 469 ntBASIC5.04□□□□□ -1.6
PCDHGA3Q9Y5H0 MYL12BP2-201ENST00000503948 512 ntBASIC5.04□□□□□ -1.6
PCDHGA3Q9Y5H0 AC093767.1-201ENST00000504523 156 ntBASIC5.04□□□□□ -1.6
PCDHGA3Q9Y5H0 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC5.04□□□□□ -1.6
PCDHGA3Q9Y5H0 AC079140.3-201ENST00000511111 550 ntBASIC5.04□□□□□ -1.6
PCDHGA3Q9Y5H0 RNU4ATAC10P-201ENST00000516967 122 ntBASIC5.04□□□□□ -1.6
PCDHGA3Q9Y5H0 IGHV3-32-201ENST00000519182 355 ntBASIC5.04□□□□□ -1.6
PCDHGA3Q9Y5H0 OSBPL9P2-201ENST00000526582 1228 ntBASIC5.04□□□□□ -1.6
PCDHGA3Q9Y5H0 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC5.04□□□□□ -1.6
PCDHGA3Q9Y5H0 OR6C73P-201ENST00000546432 358 ntBASIC5.04□□□□□ -1.6
PCDHGA3Q9Y5H0 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PCDHGA3Q9Y5H0 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PCDHGA3Q9Y5H0 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC5.04□□□□□ -1.6
PCDHGA3Q9Y5H0 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC5.04□□□□□ -1.6
PCDHGA3Q9Y5H0 MIR3934-201ENST00000579806 107 ntBASIC5.04□□□□□ -1.6
PCDHGA3Q9Y5H0 MIR4480-201ENST00000582492 71 ntBASIC5.04□□□□□ -1.6
PCDHGA3Q9Y5H0 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC5.04□□□□□ -1.6
PCDHGA3Q9Y5H0 AC012065.4-201ENST00000602445 679 ntBASIC5.04□□□□□ -1.6
PCDHGA3Q9Y5H0 AC239868.4-201ENST00000608318 671 ntBASIC5.04□□□□□ -1.6
PCDHGA3Q9Y5H0 FAM25E-202ENST00000608562 189 ntBASIC5.04□□□□□ -1.6
PCDHGA3Q9Y5H0 AC010678.1-201ENST00000614118 713 ntBASIC5.04□□□□□ -1.6
PCDHGA3Q9Y5H0 AC009318.4-201ENST00000620496 486 ntBASIC5.04□□□□□ -1.6
PCDHGA3Q9Y5H0 AL359740.1-201ENST00000624340 592 ntBASIC5.04□□□□□ -1.6
PCDHGA3Q9Y5H0 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC5.04□□□□□ -1.6
PCDHGA3Q9Y5H0 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
PCDHGA3Q9Y5H0 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC5.04□□□□□ -1.6
PCDHGA3Q9Y5H0 AL596275.2-204ENST00000641628 552 ntBASIC5.04□□□□□ -1.6
PCDHGA3Q9Y5H0 AC073869.8-201ENST00000641806 335 ntBASIC5.04□□□□□ -1.6
PCDHGA3Q9Y5H0 AL596275.2-206ENST00000641957 626 ntBASIC5.04□□□□□ -1.6
PCDHGA3Q9Y5H0 AC104623.2-202ENST00000623477 4002 ntBASIC5.04□□□□□ -1.6
PCDHGA3Q9Y5H0 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PCDHGA3Q9Y5H0 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC5.04□□□□□ -1.6
PCDHGA3Q9Y5H0 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.04□□□□□ -1.6
PCDHGA3Q9Y5H0 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
PCDHGA3Q9Y5H0 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.04□□□□□ -1.6
PCDHGA3Q9Y5H0 AC097714.1-201ENST00000511272 1647 ntBASIC5.04□□□□□ -1.6
PCDHGA3Q9Y5H0 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
PCDHGA3Q9Y5H0 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
PCDHGA3Q9Y5H0 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.04□□□□□ -1.6
PCDHGA3Q9Y5H0 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
PCDHGA3Q9Y5H0 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.04□□□□□ -1.6
PCDHGA3Q9Y5H0 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PCDHGA3Q9Y5H0 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
PCDHGA3Q9Y5H0 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PCDHGA3Q9Y5H0 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PCDHGA3Q9Y5H0 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PCDHGA3Q9Y5H0 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
PCDHGA3Q9Y5H0 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
PCDHGA3Q9Y5H0 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC5.03□□□□□ -1.6
PCDHGA3Q9Y5H0 OR11H5P-202ENST00000641612 1325 ntBASIC5.03□□□□□ -1.6
PCDHGA3Q9Y5H0 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC5.03□□□□□ -1.6
PCDHGA3Q9Y5H0 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
PCDHGA3Q9Y5H0 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
PCDHGA3Q9Y5H0 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.03□□□□□ -1.6
PCDHGA3Q9Y5H0 RNU6-1042P-201ENST00000384204 107 ntBASIC5.03□□□□□ -1.6
PCDHGA3Q9Y5H0 MIR105-1-201ENST00000385222 81 ntBASIC5.03□□□□□ -1.6
PCDHGA3Q9Y5H0 RNU6-192P-201ENST00000391253 100 ntBASIC5.03□□□□□ -1.6
PCDHGA3Q9Y5H0 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC5.03□□□□□ -1.6
PCDHGA3Q9Y5H0 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.03□□□□□ -1.6
PCDHGA3Q9Y5H0 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC5.03□□□□□ -1.6
PCDHGA3Q9Y5H0 RPL7AP49-201ENST00000429522 581 ntBASIC5.03□□□□□ -1.6
PCDHGA3Q9Y5H0 AL591438.1-201ENST00000433508 581 ntBASIC5.03□□□□□ -1.6
PCDHGA3Q9Y5H0 SKP1P1-201ENST00000438081 489 ntBASIC5.03□□□□□ -1.6
PCDHGA3Q9Y5H0 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC5.03□□□□□ -1.6
PCDHGA3Q9Y5H0 MTND5P14-201ENST00000441481 1267 ntBASIC5.03□□□□□ -1.6
PCDHGA3Q9Y5H0 ELOCP30-201ENST00000447108 299 ntBASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms