Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 MTND2P16-201ENST00000419987 799 ntBASIC4.79□□□□□ -1.64
HDAC6Q9UBN7 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC4.79□□□□□ -1.64
HDAC6Q9UBN7 DYNLL1P7-201ENST00000429273 258 ntBASIC4.79□□□□□ -1.64
HDAC6Q9UBN7 HIGD1AP4-201ENST00000430194 280 ntBASIC4.79□□□□□ -1.64
HDAC6Q9UBN7 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.79□□□□□ -1.64
HDAC6Q9UBN7 RPEP2-201ENST00000432149 701 ntBASIC4.79□□□□□ -1.64
HDAC6Q9UBN7 HLA-N-201ENST00000437516 135 ntBASIC4.79□□□□□ -1.64
HDAC6Q9UBN7 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC4.79□□□□□ -1.64
HDAC6Q9UBN7 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.79□□□□□ -1.64
HDAC6Q9UBN7 RPS6P4-201ENST00000494693 758 ntBASIC4.79□□□□□ -1.64
HDAC6Q9UBN7 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.79□□□□□ -1.64
HDAC6Q9UBN7 SAP18P1-201ENST00000512058 390 ntBASIC4.79□□□□□ -1.64
HDAC6Q9UBN7 AC108064.1-201ENST00000513791 460 ntBASIC4.79□□□□□ -1.64
HDAC6Q9UBN7 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC4.79□□□□□ -1.64
HDAC6Q9UBN7 AC090281.1-201ENST00000523019 276 ntBASIC4.79□□□□□ -1.64
HDAC6Q9UBN7 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.79□□□□□ -1.64
HDAC6Q9UBN7 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC4.79□□□□□ -1.64
HDAC6Q9UBN7 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC4.79□□□□□ -1.64
HDAC6Q9UBN7 AC044913.1-201ENST00000557200 430 ntBASIC4.79□□□□□ -1.64
HDAC6Q9UBN7 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC4.79□□□□□ -1.64
HDAC6Q9UBN7 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.79□□□□□ -1.64
HDAC6Q9UBN7 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.79□□□□□ -1.64
HDAC6Q9UBN7 MIR5708-201ENST00000579723 85 ntBASIC4.79□□□□□ -1.64
HDAC6Q9UBN7 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.79□□□□□ -1.64
HDAC6Q9UBN7 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC4.79□□□□□ -1.64
HDAC6Q9UBN7 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC4.79□□□□□ -1.64
HDAC6Q9UBN7 AC079395.3-201ENST00000615161 484 ntBASIC4.79□□□□□ -1.64
HDAC6Q9UBN7 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.79□□□□□ -1.64
HDAC6Q9UBN7 AL356121.2-201ENST00000624715 780 ntBASIC4.79□□□□□ -1.64
HDAC6Q9UBN7 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.79□□□□□ -1.64
HDAC6Q9UBN7 FP325313.1-201ENST00000638228 703 ntBASIC4.79□□□□□ -1.64
HDAC6Q9UBN7 MFSD8-245ENST00000641743 948 ntBASIC4.79□□□□□ -1.64
HDAC6Q9UBN7 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.79□□□□□ -1.64
HDAC6Q9UBN7 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
HDAC6Q9UBN7 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HDAC6Q9UBN7 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.79□□□□□ -1.64
HDAC6Q9UBN7 AC025263.3-201ENST00000622965 1396 ntBASIC4.78□□□□□ -1.64
HDAC6Q9UBN7 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HDAC6Q9UBN7 AC011266.1-201ENST00000624119 3569 ntBASIC4.78□□□□□ -1.64
HDAC6Q9UBN7 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HDAC6Q9UBN7 AC119744.1-201ENST00000454746 1715 ntBASIC4.78□□□□□ -1.64
HDAC6Q9UBN7 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.78□□□□□ -1.64
HDAC6Q9UBN7 AC134882.1-201ENST00000603738 1676 ntBASIC4.78□□□□□ -1.64
HDAC6Q9UBN7 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
HDAC6Q9UBN7 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
HDAC6Q9UBN7 RNA5SP130-201ENST00000364431 114 ntBASIC4.78□□□□□ -1.64
HDAC6Q9UBN7 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC4.78□□□□□ -1.64
HDAC6Q9UBN7 RN7SKP33-201ENST00000410942 340 ntBASIC4.78□□□□□ -1.64
HDAC6Q9UBN7 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.78□□□□□ -1.64
HDAC6Q9UBN7 AC234782.4-201ENST00000417646 1048 ntBASIC4.78□□□□□ -1.64
HDAC6Q9UBN7 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.78□□□□□ -1.64
HDAC6Q9UBN7 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC4.78□□□□□ -1.64
HDAC6Q9UBN7 AC062016.2-201ENST00000420950 676 ntBASIC4.78□□□□□ -1.64
HDAC6Q9UBN7 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC4.78□□□□□ -1.64
HDAC6Q9UBN7 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC4.78□□□□□ -1.64
HDAC6Q9UBN7 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC4.78□□□□□ -1.64
HDAC6Q9UBN7 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.78□□□□□ -1.64
HDAC6Q9UBN7 AL353597.2-202ENST00000434901 373 ntBASIC4.78□□□□□ -1.64
HDAC6Q9UBN7 NANOGP2-201ENST00000435391 727 ntBASIC4.78□□□□□ -1.64
HDAC6Q9UBN7 HMGB1P45-201ENST00000435986 653 ntBASIC4.78□□□□□ -1.64
HDAC6Q9UBN7 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.78□□□□□ -1.64
HDAC6Q9UBN7 UBE2V1P5-201ENST00000440070 405 ntBASIC4.78□□□□□ -1.64
HDAC6Q9UBN7 AC069285.2-201ENST00000440210 275 ntBASIC4.78□□□□□ -1.64
HDAC6Q9UBN7 RPS26P30-201ENST00000443431 335 ntBASIC4.78□□□□□ -1.64
HDAC6Q9UBN7 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.78□□□□□ -1.64
HDAC6Q9UBN7 MRPL35P4-201ENST00000453682 566 ntBASIC4.78□□□□□ -1.64
HDAC6Q9UBN7 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC4.78□□□□□ -1.64
HDAC6Q9UBN7 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.78□□□□□ -1.64
HDAC6Q9UBN7 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC4.78□□□□□ -1.64
HDAC6Q9UBN7 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC4.78□□□□□ -1.64
HDAC6Q9UBN7 BOLA3P3-201ENST00000505182 232 ntBASIC4.78□□□□□ -1.64
HDAC6Q9UBN7 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC4.78□□□□□ -1.64
HDAC6Q9UBN7 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.78□□□□□ -1.64
HDAC6Q9UBN7 AC099522.1-202ENST00000514718 367 ntBASIC4.78□□□□□ -1.64
HDAC6Q9UBN7 RN7SKP283-201ENST00000517197 270 ntBASIC4.78□□□□□ -1.64
HDAC6Q9UBN7 DUXAP5-201ENST00000529668 529 ntBASIC4.78□□□□□ -1.64
HDAC6Q9UBN7 AP001317.1-201ENST00000531194 960 ntBASIC4.78□□□□□ -1.64
HDAC6Q9UBN7 AC023538.1-201ENST00000534576 736 ntBASIC4.78□□□□□ -1.64
HDAC6Q9UBN7 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC4.78□□□□□ -1.64
HDAC6Q9UBN7 AC068446.3-201ENST00000555285 382 ntBASIC4.78□□□□□ -1.64
HDAC6Q9UBN7 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC4.78□□□□□ -1.64
HDAC6Q9UBN7 VN1R83P-201ENST00000595685 445 ntBASIC4.78□□□□□ -1.64
HDAC6Q9UBN7 PSMA6P4-201ENST00000603247 718 ntBASIC4.78□□□□□ -1.64
HDAC6Q9UBN7 AC007349.4-201ENST00000608114 532 ntBASIC4.78□□□□□ -1.64
HDAC6Q9UBN7 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.78□□□□□ -1.64
HDAC6Q9UBN7 FAM27D1-201ENST00000612308 341 ntBASIC4.78□□□□□ -1.64
HDAC6Q9UBN7 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.78□□□□□ -1.64
HDAC6Q9UBN7 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HDAC6Q9UBN7 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
HDAC6Q9UBN7 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HDAC6Q9UBN7 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
HDAC6Q9UBN7 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.78□□□□□ -1.64
HDAC6Q9UBN7 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.78□□□□□ -1.64
HDAC6Q9UBN7 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HDAC6Q9UBN7 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HDAC6Q9UBN7 MTND4P10-201ENST00000446199 1363 ntBASIC4.78□□□□□ -1.64
HDAC6Q9UBN7 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
HDAC6Q9UBN7 USP9YP4-201ENST00000424401 1745 ntBASIC4.77□□□□□ -1.65
HDAC6Q9UBN7 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HDAC6Q9UBN7 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms