Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 AL049872.1-201ENST00000556323 322 ntBASIC6.18□□□□□ -1.42
CNTN3Q9P232 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC6.18□□□□□ -1.42
CNTN3Q9P232 AC005668.1-201ENST00000571142 476 ntBASIC6.18□□□□□ -1.42
CNTN3Q9P232 HCG18-243ENST00000602498 327 ntTSL 3 BASIC6.18□□□□□ -1.42
CNTN3Q9P232 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC6.18□□□□□ -1.42
CNTN3Q9P232 AC090607.5-201ENST00000615692 224 ntBASIC6.18□□□□□ -1.42
CNTN3Q9P232 AC009248.2-201ENST00000619826 254 ntBASIC6.18□□□□□ -1.42
CNTN3Q9P232 MIR6886-201ENST00000619864 61 ntBASIC6.18□□□□□ -1.42
CNTN3Q9P232 AL356585.4-201ENST00000623078 1229 ntBASIC6.18□□□□□ -1.42
CNTN3Q9P232 AC005858.4-201ENST00000623191 700 ntBASIC6.18□□□□□ -1.42
CNTN3Q9P232 AC015871.5-202ENST00000623252 701 ntBASIC6.18□□□□□ -1.42
CNTN3Q9P232 AL691477.1-201ENST00000624398 162 ntBASIC6.18□□□□□ -1.42
CNTN3Q9P232 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC6.18□□□□□ -1.42
CNTN3Q9P232 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC6.18□□□□□ -1.42
CNTN3Q9P232 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
CNTN3Q9P232 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CNTN3Q9P232 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC6.18□□□□□ -1.42
CNTN3Q9P232 AC097063.1-201ENST00000426714 1797 ntBASIC6.18□□□□□ -1.42
CNTN3Q9P232 LINC01963-201ENST00000562038 3148 ntBASIC6.18□□□□□ -1.42
CNTN3Q9P232 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CNTN3Q9P232 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CNTN3Q9P232 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC6.18□□□□□ -1.42
CNTN3Q9P232 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CNTN3Q9P232 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC6.18□□□□□ -1.42
CNTN3Q9P232 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC6.18□□□□□ -1.42
CNTN3Q9P232 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
CNTN3Q9P232 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CNTN3Q9P232 HSPA8P18-201ENST00000439846 1928 ntBASIC6.17□□□□□ -1.42
CNTN3Q9P232 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CNTN3Q9P232 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
CNTN3Q9P232 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CNTN3Q9P232 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
CNTN3Q9P232 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CNTN3Q9P232 Y_RNA.138-201ENST00000363462 102 ntBASIC6.17□□□□□ -1.42
CNTN3Q9P232 RNU1-85P-201ENST00000364127 164 ntBASIC6.17□□□□□ -1.42
CNTN3Q9P232 Y_RNA.315-201ENST00000365117 102 ntBASIC6.17□□□□□ -1.42
CNTN3Q9P232 Y_RNA.384-201ENST00000383909 102 ntBASIC6.17□□□□□ -1.42
CNTN3Q9P232 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC6.17□□□□□ -1.42
CNTN3Q9P232 AL592293.2-201ENST00000422292 996 ntBASIC6.17□□□□□ -1.42
CNTN3Q9P232 AL353678.1-201ENST00000422735 741 ntBASIC6.17□□□□□ -1.42
CNTN3Q9P232 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC6.17□□□□□ -1.42
CNTN3Q9P232 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC6.17□□□□□ -1.42
CNTN3Q9P232 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC6.17□□□□□ -1.42
CNTN3Q9P232 AC119618.1-201ENST00000434191 222 ntBASIC6.17□□□□□ -1.42
CNTN3Q9P232 AL627308.1-201ENST00000435693 821 ntBASIC6.17□□□□□ -1.42
CNTN3Q9P232 TCEA1P1-201ENST00000449716 880 ntBASIC6.17□□□□□ -1.42
CNTN3Q9P232 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC6.17□□□□□ -1.42
CNTN3Q9P232 RPS20P32-201ENST00000456044 356 ntBASIC6.17□□□□□ -1.42
CNTN3Q9P232 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC6.17□□□□□ -1.42
CNTN3Q9P232 RN7SL466P-201ENST00000497546 295 ntBASIC6.17□□□□□ -1.42
CNTN3Q9P232 RPL38P4-201ENST00000502376 214 ntBASIC6.17□□□□□ -1.42
CNTN3Q9P232 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC6.17□□□□□ -1.42
CNTN3Q9P232 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC6.17□□□□□ -1.42
CNTN3Q9P232 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC6.17□□□□□ -1.42
CNTN3Q9P232 UBE2Q2P10-201ENST00000514854 900 ntBASIC6.17□□□□□ -1.42
CNTN3Q9P232 RNA5SP362-201ENST00000516048 118 ntBASIC6.17□□□□□ -1.42
CNTN3Q9P232 NRBF2P4-201ENST00000520874 850 ntBASIC6.17□□□□□ -1.42
CNTN3Q9P232 IGHVIII-67-4-201ENST00000524281 296 ntBASIC6.17□□□□□ -1.42
CNTN3Q9P232 AC023050.3-201ENST00000541142 333 ntBASIC6.17□□□□□ -1.42
CNTN3Q9P232 AC123904.2-201ENST00000548059 300 ntBASIC6.17□□□□□ -1.42
CNTN3Q9P232 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC6.17□□□□□ -1.42
CNTN3Q9P232 AC012182.1-201ENST00000570133 895 ntBASIC6.17□□□□□ -1.42
CNTN3Q9P232 MIR1273E-201ENST00000581165 102 ntBASIC6.17□□□□□ -1.42
CNTN3Q9P232 MIR3118-1-201ENST00000581787 76 ntBASIC6.17□□□□□ -1.42
CNTN3Q9P232 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CNTN3Q9P232 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC6.17□□□□□ -1.42
CNTN3Q9P232 AL133215.3-201ENST00000609801 448 ntBASIC6.17□□□□□ -1.42
CNTN3Q9P232 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CNTN3Q9P232 AC093913.1-201ENST00000614178 329 ntBASIC6.17□□□□□ -1.42
CNTN3Q9P232 AC233309.1-201ENST00000619522 751 ntBASIC6.17□□□□□ -1.42
CNTN3Q9P232 CR392039.4-201ENST00000624968 501 ntBASIC6.17□□□□□ -1.42
CNTN3Q9P232 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC6.17□□□□□ -1.42
CNTN3Q9P232 AL049767.1-202ENST00000637826 242 ntBASIC6.17□□□□□ -1.42
CNTN3Q9P232 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CNTN3Q9P232 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CNTN3Q9P232 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CNTN3Q9P232 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC6.17□□□□□ -1.42
CNTN3Q9P232 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
CNTN3Q9P232 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CNTN3Q9P232 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CNTN3Q9P232 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC6.17□□□□□ -1.42
CNTN3Q9P232 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CNTN3Q9P232 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC6.16□□□□□ -1.42
CNTN3Q9P232 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CNTN3Q9P232 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC6.16□□□□□ -1.42
CNTN3Q9P232 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC6.16□□□□□ -1.42
CNTN3Q9P232 RNU6-249P-201ENST00000363016 102 ntBASIC6.16□□□□□ -1.42
CNTN3Q9P232 SNORA51.1-201ENST00000363243 140 ntBASIC6.16□□□□□ -1.42
CNTN3Q9P232 PRRC2CP1-201ENST00000404428 159 ntBASIC6.16□□□□□ -1.42
CNTN3Q9P232 ZSCAN12P1-201ENST00000406489 419 ntBASIC6.16□□□□□ -1.42
CNTN3Q9P232 AC078974.1-201ENST00000411597 223 ntBASIC6.16□□□□□ -1.42
CNTN3Q9P232 MTND3P8-201ENST00000412909 339 ntBASIC6.16□□□□□ -1.42
CNTN3Q9P232 OR6E1P-201ENST00000414424 923 ntBASIC6.16□□□□□ -1.42
CNTN3Q9P232 RPL6P29-201ENST00000414863 865 ntBASIC6.16□□□□□ -1.42
CNTN3Q9P232 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC6.16□□□□□ -1.42
CNTN3Q9P232 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
CNTN3Q9P232 AC019097.1-201ENST00000424783 735 ntBASIC6.16□□□□□ -1.42
CNTN3Q9P232 TRAPPC2P5-201ENST00000426293 308 ntBASIC6.16□□□□□ -1.42
CNTN3Q9P232 CRIP1P1-201ENST00000427567 185 ntBASIC6.16□□□□□ -1.42
CNTN3Q9P232 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms