Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
NCKIPSDQ9NZQ3 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
NCKIPSDQ9NZQ3 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.56□□□□□ -1.68
NCKIPSDQ9NZQ3 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
NCKIPSDQ9NZQ3 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.56□□□□□ -1.68
NCKIPSDQ9NZQ3 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
NCKIPSDQ9NZQ3 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
NCKIPSDQ9NZQ3 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
NCKIPSDQ9NZQ3 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
NCKIPSDQ9NZQ3 OR52B1P-201ENST00000316506 909 ntBASIC4.56□□□□□ -1.68
NCKIPSDQ9NZQ3 AC011155.1-201ENST00000316512 456 ntBASIC4.56□□□□□ -1.68
NCKIPSDQ9NZQ3 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
NCKIPSDQ9NZQ3 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.56□□□□□ -1.68
NCKIPSDQ9NZQ3 RNU6-619P-201ENST00000365146 108 ntBASIC4.56□□□□□ -1.68
NCKIPSDQ9NZQ3 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
NCKIPSDQ9NZQ3 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
NCKIPSDQ9NZQ3 SNORA68.2-201ENST00000391263 128 ntBASIC4.56□□□□□ -1.68
NCKIPSDQ9NZQ3 LAP3P1-201ENST00000403648 294 ntBASIC4.56□□□□□ -1.68
NCKIPSDQ9NZQ3 AL450992.3-201ENST00000413192 568 ntBASIC4.56□□□□□ -1.68
NCKIPSDQ9NZQ3 AL592293.2-201ENST00000422292 996 ntBASIC4.56□□□□□ -1.68
NCKIPSDQ9NZQ3 AL390023.1-201ENST00000428836 262 ntBASIC4.56□□□□□ -1.68
NCKIPSDQ9NZQ3 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.56□□□□□ -1.68
NCKIPSDQ9NZQ3 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.56□□□□□ -1.68
NCKIPSDQ9NZQ3 AC073387.1-201ENST00000453261 709 ntBASIC4.56□□□□□ -1.68
NCKIPSDQ9NZQ3 AC011979.1-201ENST00000472300 483 ntBASIC4.56□□□□□ -1.68
NCKIPSDQ9NZQ3 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC4.56□□□□□ -1.68
NCKIPSDQ9NZQ3 UBA52P3-201ENST00000491303 382 ntBASIC4.56□□□□□ -1.68
NCKIPSDQ9NZQ3 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC4.56□□□□□ -1.68
NCKIPSDQ9NZQ3 AC048346.1-201ENST00000510247 144 ntBASIC4.56□□□□□ -1.68
NCKIPSDQ9NZQ3 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC4.56□□□□□ -1.68
NCKIPSDQ9NZQ3 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC4.56□□□□□ -1.68
NCKIPSDQ9NZQ3 RNA5SP446-201ENST00000515955 82 ntBASIC4.56□□□□□ -1.68
NCKIPSDQ9NZQ3 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC4.56□□□□□ -1.68
NCKIPSDQ9NZQ3 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC4.56□□□□□ -1.68
NCKIPSDQ9NZQ3 AC090151.1-201ENST00000520784 730 ntBASIC4.56□□□□□ -1.68
NCKIPSDQ9NZQ3 AP003461.1-201ENST00000528866 78 ntBASIC4.56□□□□□ -1.68
NCKIPSDQ9NZQ3 AP001317.1-201ENST00000531194 960 ntBASIC4.56□□□□□ -1.68
NCKIPSDQ9NZQ3 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC4.56□□□□□ -1.68
NCKIPSDQ9NZQ3 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC4.56□□□□□ -1.68
NCKIPSDQ9NZQ3 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC4.56□□□□□ -1.68
NCKIPSDQ9NZQ3 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC4.56□□□□□ -1.68
NCKIPSDQ9NZQ3 AC011477.5-201ENST00000586571 259 ntBASIC4.56□□□□□ -1.68
NCKIPSDQ9NZQ3 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.56□□□□□ -1.68
NCKIPSDQ9NZQ3 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC4.56□□□□□ -1.68
NCKIPSDQ9NZQ3 AC008782.1-201ENST00000603386 430 ntBASIC4.56□□□□□ -1.68
NCKIPSDQ9NZQ3 DPRXP5-201ENST00000604662 539 ntBASIC4.56□□□□□ -1.68
NCKIPSDQ9NZQ3 VIS1.1-201ENST00000610517 203 ntBASIC4.56□□□□□ -1.68
NCKIPSDQ9NZQ3 AC105227.2-201ENST00000615075 605 ntBASIC4.56□□□□□ -1.68
NCKIPSDQ9NZQ3 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC4.56□□□□□ -1.68
NCKIPSDQ9NZQ3 AC009704.2-201ENST00000618739 483 ntBASIC4.56□□□□□ -1.68
NCKIPSDQ9NZQ3 AL603755.1-201ENST00000619504 163 ntBASIC4.56□□□□□ -1.68
NCKIPSDQ9NZQ3 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.56□□□□□ -1.68
NCKIPSDQ9NZQ3 AC067931.1-201ENST00000624190 671 ntBASIC4.56□□□□□ -1.68
NCKIPSDQ9NZQ3 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC4.56□□□□□ -1.68
NCKIPSDQ9NZQ3 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
NCKIPSDQ9NZQ3 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.56□□□□□ -1.68
NCKIPSDQ9NZQ3 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.56□□□□□ -1.68
NCKIPSDQ9NZQ3 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.56□□□□□ -1.68
NCKIPSDQ9NZQ3 AC018529.3-201ENST00000624212 2254 ntBASIC4.56□□□□□ -1.68
NCKIPSDQ9NZQ3 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
NCKIPSDQ9NZQ3 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
NCKIPSDQ9NZQ3 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
NCKIPSDQ9NZQ3 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
NCKIPSDQ9NZQ3 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.55□□□□□ -1.68
NCKIPSDQ9NZQ3 AL133243.3-201ENST00000617415 3004 ntBASIC4.55□□□□□ -1.68
NCKIPSDQ9NZQ3 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.55□□□□□ -1.68
NCKIPSDQ9NZQ3 Y_RNA.192-201ENST00000363977 102 ntBASIC4.55□□□□□ -1.68
NCKIPSDQ9NZQ3 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
NCKIPSDQ9NZQ3 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
NCKIPSDQ9NZQ3 RNU6-157P-201ENST00000383957 107 ntBASIC4.55□□□□□ -1.68
NCKIPSDQ9NZQ3 ATP5F1P3-201ENST00000397213 657 ntBASIC4.55□□□□□ -1.68
NCKIPSDQ9NZQ3 AL078595.1-201ENST00000404458 226 ntBASIC4.55□□□□□ -1.68
NCKIPSDQ9NZQ3 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.55□□□□□ -1.68
NCKIPSDQ9NZQ3 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
NCKIPSDQ9NZQ3 TEX41-202ENST00000414256 604 ntTSL 5 BASIC4.55□□□□□ -1.68
NCKIPSDQ9NZQ3 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.55□□□□□ -1.68
NCKIPSDQ9NZQ3 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC4.55□□□□□ -1.68
NCKIPSDQ9NZQ3 RPS12P5-201ENST00000423449 371 ntBASIC4.55□□□□□ -1.68
NCKIPSDQ9NZQ3 DPRXP1-201ENST00000426312 460 ntBASIC4.55□□□□□ -1.68
NCKIPSDQ9NZQ3 RSL24D1P6-201ENST00000426934 401 ntBASIC4.55□□□□□ -1.68
NCKIPSDQ9NZQ3 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC4.55□□□□□ -1.68
NCKIPSDQ9NZQ3 AC011998.1-201ENST00000433403 117 ntBASIC4.55□□□□□ -1.68
NCKIPSDQ9NZQ3 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC4.55□□□□□ -1.68
NCKIPSDQ9NZQ3 HMGB3P9-201ENST00000441799 583 ntBASIC4.55□□□□□ -1.68
NCKIPSDQ9NZQ3 MTND5P2-201ENST00000442927 1142 ntBASIC4.55□□□□□ -1.68
NCKIPSDQ9NZQ3 MTND2P4-201ENST00000445034 1004 ntBASIC4.55□□□□□ -1.68
NCKIPSDQ9NZQ3 AC007327.1-201ENST00000447461 264 ntBASIC4.55□□□□□ -1.68
NCKIPSDQ9NZQ3 RPS27AP15-201ENST00000447672 466 ntBASIC4.55□□□□□ -1.68
NCKIPSDQ9NZQ3 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC4.55□□□□□ -1.68
NCKIPSDQ9NZQ3 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.55□□□□□ -1.68
NCKIPSDQ9NZQ3 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.55□□□□□ -1.68
NCKIPSDQ9NZQ3 AC009963.2-201ENST00000453431 138 ntBASIC4.55□□□□□ -1.68
NCKIPSDQ9NZQ3 AC104763.1-201ENST00000475274 360 ntBASIC4.55□□□□□ -1.68
NCKIPSDQ9NZQ3 RPL36AP41-201ENST00000493820 306 ntBASIC4.55□□□□□ -1.68
NCKIPSDQ9NZQ3 AC011352.3-201ENST00000505162 593 ntBASIC4.55□□□□□ -1.68
NCKIPSDQ9NZQ3 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC4.55□□□□□ -1.68
NCKIPSDQ9NZQ3 OR5BM1P-201ENST00000512021 366 ntBASIC4.55□□□□□ -1.68
NCKIPSDQ9NZQ3 AP001207.1-201ENST00000524051 481 ntBASIC4.55□□□□□ -1.68
NCKIPSDQ9NZQ3 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC4.55□□□□□ -1.68
NCKIPSDQ9NZQ3 OR4C2P-201ENST00000530855 1064 ntBASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 299.7 ms