Protein–RNA interactions for Protein: Q9NUW8

TDP1, Tyrosyl-DNA phosphodiesterase 1, humanhuman

Predictions only

Length 608 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1Q9NUW8 RNA5SP269-201ENST00000459032 137 ntBASIC5.03□□□□□ -1.6
TDP1Q9NUW8 AC092757.1-201ENST00000467293 467 ntBASIC5.03□□□□□ -1.6
TDP1Q9NUW8 RPL12P20-201ENST00000475538 479 ntBASIC5.03□□□□□ -1.6
TDP1Q9NUW8 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC5.03□□□□□ -1.6
TDP1Q9NUW8 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC5.03□□□□□ -1.6
TDP1Q9NUW8 AC006499.2-201ENST00000513470 337 ntBASIC5.03□□□□□ -1.6
TDP1Q9NUW8 RNU6-720P-201ENST00000516363 108 ntBASIC5.03□□□□□ -1.6
TDP1Q9NUW8 RN7SKP92-201ENST00000517266 244 ntBASIC5.03□□□□□ -1.6
TDP1Q9NUW8 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.03□□□□□ -1.6
TDP1Q9NUW8 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC5.03□□□□□ -1.6
TDP1Q9NUW8 CYCSP28-201ENST00000534284 321 ntBASIC5.03□□□□□ -1.6
TDP1Q9NUW8 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC5.03□□□□□ -1.6
TDP1Q9NUW8 AL049839.1-201ENST00000556151 657 ntBASIC5.03□□□□□ -1.6
TDP1Q9NUW8 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.03□□□□□ -1.6
TDP1Q9NUW8 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.03□□□□□ -1.6
TDP1Q9NUW8 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC5.03□□□□□ -1.6
TDP1Q9NUW8 AP001004.1-201ENST00000582468 324 ntBASIC5.03□□□□□ -1.6
TDP1Q9NUW8 ABBA01006766.1-201ENST00000584728 294 ntBASIC5.03□□□□□ -1.6
TDP1Q9NUW8 AC006272.2-201ENST00000594725 163 ntBASIC5.03□□□□□ -1.6
TDP1Q9NUW8 AL136363.2-201ENST00000604173 851 ntBASIC5.03□□□□□ -1.6
TDP1Q9NUW8 AC015540.1-201ENST00000615828 501 ntBASIC5.03□□□□□ -1.6
TDP1Q9NUW8 AC123768.4-201ENST00000616244 701 ntBASIC5.03□□□□□ -1.6
TDP1Q9NUW8 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
TDP1Q9NUW8 AL356473.1-201ENST00000406203 1408 ntBASIC5.03□□□□□ -1.6
TDP1Q9NUW8 CYP1D1P-201ENST00000416662 1433 ntBASIC5.03□□□□□ -1.6
TDP1Q9NUW8 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.03□□□□□ -1.6
TDP1Q9NUW8 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
TDP1Q9NUW8 MTND4P16-201ENST00000466108 1367 ntBASIC5.03□□□□□ -1.6
TDP1Q9NUW8 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
TDP1Q9NUW8 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.02□□□□□ -1.61
TDP1Q9NUW8 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
TDP1Q9NUW8 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.02□□□□□ -1.61
TDP1Q9NUW8 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC5.02□□□□□ -1.61
TDP1Q9NUW8 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
TDP1Q9NUW8 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
TDP1Q9NUW8 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
TDP1Q9NUW8 RNA5-8SP7-201ENST00000363443 155 ntBASIC5.02□□□□□ -1.61
TDP1Q9NUW8 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
TDP1Q9NUW8 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
TDP1Q9NUW8 SNORA75-201ENST00000384158 137 ntBASIC5.02□□□□□ -1.61
TDP1Q9NUW8 Y_RNA.517-201ENST00000384551 106 ntBASIC5.02□□□□□ -1.61
TDP1Q9NUW8 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
TDP1Q9NUW8 RNU6-603P-201ENST00000411403 107 ntBASIC5.02□□□□□ -1.61
TDP1Q9NUW8 RPS7P13-201ENST00000413955 498 ntBASIC5.02□□□□□ -1.61
TDP1Q9NUW8 UBTFL3-201ENST00000418934 1024 ntBASIC5.02□□□□□ -1.61
TDP1Q9NUW8 RPL36P19-201ENST00000430744 301 ntBASIC5.02□□□□□ -1.61
TDP1Q9NUW8 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC5.02□□□□□ -1.61
TDP1Q9NUW8 RPL7AP61-201ENST00000443410 636 ntBASIC5.02□□□□□ -1.61
TDP1Q9NUW8 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC5.02□□□□□ -1.61
TDP1Q9NUW8 RPL39P6-201ENST00000448289 150 ntBASIC5.02□□□□□ -1.61
TDP1Q9NUW8 snoU13.1-201ENST00000459157 104 ntBASIC5.02□□□□□ -1.61
TDP1Q9NUW8 AC097493.1-201ENST00000463958 372 ntBASIC5.02□□□□□ -1.61
TDP1Q9NUW8 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC5.02□□□□□ -1.61
TDP1Q9NUW8 UBTFL6-201ENST00000477929 1024 ntBASIC5.02□□□□□ -1.61
TDP1Q9NUW8 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC5.02□□□□□ -1.61
TDP1Q9NUW8 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC5.02□□□□□ -1.61
TDP1Q9NUW8 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
TDP1Q9NUW8 ENPP7P11-201ENST00000505915 627 ntBASIC5.02□□□□□ -1.61
TDP1Q9NUW8 AC111000.3-201ENST00000508057 576 ntBASIC5.02□□□□□ -1.61
TDP1Q9NUW8 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.02□□□□□ -1.61
TDP1Q9NUW8 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC5.02□□□□□ -1.61
TDP1Q9NUW8 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC5.02□□□□□ -1.61
TDP1Q9NUW8 OR4A12P-201ENST00000530847 918 ntBASIC5.02□□□□□ -1.61
TDP1Q9NUW8 AL139174.1-201ENST00000531489 886 ntBASIC5.02□□□□□ -1.61
TDP1Q9NUW8 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC5.02□□□□□ -1.61
TDP1Q9NUW8 AC133555.2-201ENST00000550213 292 ntBASIC5.02□□□□□ -1.61
TDP1Q9NUW8 AC010546.1-201ENST00000569391 485 ntBASIC5.02□□□□□ -1.61
TDP1Q9NUW8 MIR5096-201ENST00000583713 70 ntBASIC5.02□□□□□ -1.61
TDP1Q9NUW8 PRPF19P1-201ENST00000584766 898 ntBASIC5.02□□□□□ -1.61
TDP1Q9NUW8 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC5.02□□□□□ -1.61
TDP1Q9NUW8 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC5.02□□□□□ -1.61
TDP1Q9NUW8 AC012065.4-201ENST00000602445 679 ntBASIC5.02□□□□□ -1.61
TDP1Q9NUW8 AC073648.5-201ENST00000603502 305 ntBASIC5.02□□□□□ -1.61
TDP1Q9NUW8 AL121932.1-201ENST00000605542 214 ntBASIC5.02□□□□□ -1.61
TDP1Q9NUW8 AC116447.1-201ENST00000613153 453 ntBASIC5.02□□□□□ -1.61
TDP1Q9NUW8 AC073968.1-201ENST00000618594 637 ntBASIC5.02□□□□□ -1.61
TDP1Q9NUW8 AL022401.1-201ENST00000619498 108 ntBASIC5.02□□□□□ -1.61
TDP1Q9NUW8 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC5.02□□□□□ -1.61
TDP1Q9NUW8 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC5.02□□□□□ -1.61
TDP1Q9NUW8 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
TDP1Q9NUW8 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
TDP1Q9NUW8 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.02□□□□□ -1.61
TDP1Q9NUW8 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.02□□□□□ -1.61
TDP1Q9NUW8 OR4G11P-202ENST00000642116 1414 ntBASIC5.02□□□□□ -1.61
TDP1Q9NUW8 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
TDP1Q9NUW8 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
TDP1Q9NUW8 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.02□□□□□ -1.61
TDP1Q9NUW8 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
TDP1Q9NUW8 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC5.02□□□□□ -1.61
TDP1Q9NUW8 AL118496.1-201ENST00000440201 1812 ntBASIC5.02□□□□□ -1.61
TDP1Q9NUW8 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
TDP1Q9NUW8 AL031985.3-201ENST00000565390 2449 ntBASIC5.02□□□□□ -1.61
TDP1Q9NUW8 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.02□□□□□ -1.61
TDP1Q9NUW8 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
TDP1Q9NUW8 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.01□□□□□ -1.61
TDP1Q9NUW8 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.01□□□□□ -1.61
TDP1Q9NUW8 SLC2A3P1-201ENST00000519666 1451 ntBASIC5.01□□□□□ -1.61
TDP1Q9NUW8 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.01□□□□□ -1.61
TDP1Q9NUW8 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.01□□□□□ -1.61
TDP1Q9NUW8 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 127.8 ms