Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 CR381572.1-201ENST00000625098 102 ntBASIC4.19□□□□□ -1.74
PCDHB16Q9NRJ7 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC4.19□□□□□ -1.74
PCDHB16Q9NRJ7 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.19□□□□□ -1.74
PCDHB16Q9NRJ7 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
PCDHB16Q9NRJ7 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
PCDHB16Q9NRJ7 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.19□□□□□ -1.74
PCDHB16Q9NRJ7 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.19□□□□□ -1.74
PCDHB16Q9NRJ7 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
PCDHB16Q9NRJ7 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PCDHB16Q9NRJ7 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
PCDHB16Q9NRJ7 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.19□□□□□ -1.74
PCDHB16Q9NRJ7 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC4.19□□□□□ -1.74
PCDHB16Q9NRJ7 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.19□□□□□ -1.74
PCDHB16Q9NRJ7 MTND5P24-201ENST00000438892 1767 ntBASIC4.19□□□□□ -1.74
PCDHB16Q9NRJ7 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
PCDHB16Q9NRJ7 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
PCDHB16Q9NRJ7 ZNF542P-204ENST00000482727 1305 ntBASIC4.19□□□□□ -1.74
PCDHB16Q9NRJ7 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC4.19□□□□□ -1.74
PCDHB16Q9NRJ7 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.19□□□□□ -1.74
PCDHB16Q9NRJ7 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.18□□□□□ -1.74
PCDHB16Q9NRJ7 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
PCDHB16Q9NRJ7 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
PCDHB16Q9NRJ7 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.18□□□□□ -1.74
PCDHB16Q9NRJ7 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
PCDHB16Q9NRJ7 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
PCDHB16Q9NRJ7 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
PCDHB16Q9NRJ7 FAM3C2-201ENST00000312214 681 ntBASIC4.18□□□□□ -1.74
PCDHB16Q9NRJ7 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
PCDHB16Q9NRJ7 RNU1-20P-201ENST00000363314 162 ntBASIC4.18□□□□□ -1.74
PCDHB16Q9NRJ7 RNVU1-3-201ENST00000364313 161 ntBASIC4.18□□□□□ -1.74
PCDHB16Q9NRJ7 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.18□□□□□ -1.74
PCDHB16Q9NRJ7 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC4.18□□□□□ -1.74
PCDHB16Q9NRJ7 RNU6-878P-201ENST00000384578 110 ntBASIC4.18□□□□□ -1.74
PCDHB16Q9NRJ7 MT-TC-201ENST00000387405 66 ntBASIC4.18□□□□□ -1.74
PCDHB16Q9NRJ7 ATP5F1P4-201ENST00000397288 746 ntBASIC4.18□□□□□ -1.74
PCDHB16Q9NRJ7 DUTP5-201ENST00000406790 469 ntBASIC4.18□□□□□ -1.74
PCDHB16Q9NRJ7 AL603766.1-201ENST00000407763 664 ntBASIC4.18□□□□□ -1.74
PCDHB16Q9NRJ7 U3.35-201ENST00000408405 208 ntBASIC4.18□□□□□ -1.74
PCDHB16Q9NRJ7 RN7SKP229-201ENST00000410465 302 ntBASIC4.18□□□□□ -1.74
PCDHB16Q9NRJ7 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.18□□□□□ -1.74
PCDHB16Q9NRJ7 VDAC1P9-201ENST00000412766 841 ntBASIC4.18□□□□□ -1.74
PCDHB16Q9NRJ7 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC4.18□□□□□ -1.74
PCDHB16Q9NRJ7 TRBV24OR9-2-201ENST00000416632 435 ntBASIC4.18□□□□□ -1.74
PCDHB16Q9NRJ7 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC4.18□□□□□ -1.74
PCDHB16Q9NRJ7 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.18□□□□□ -1.74
PCDHB16Q9NRJ7 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC4.18□□□□□ -1.74
PCDHB16Q9NRJ7 TXNL1P1-201ENST00000429528 554 ntBASIC4.18□□□□□ -1.74
PCDHB16Q9NRJ7 AL356276.2-201ENST00000435919 558 ntBASIC4.18□□□□□ -1.74
PCDHB16Q9NRJ7 CNOT7P2-201ENST00000441051 832 ntBASIC4.18□□□□□ -1.74
PCDHB16Q9NRJ7 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.18□□□□□ -1.74
PCDHB16Q9NRJ7 MTCYBP3-201ENST00000445588 1137 ntBASIC4.18□□□□□ -1.74
PCDHB16Q9NRJ7 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC4.18□□□□□ -1.74
PCDHB16Q9NRJ7 TCEA1P1-201ENST00000449716 880 ntBASIC4.18□□□□□ -1.74
PCDHB16Q9NRJ7 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC4.18□□□□□ -1.74
PCDHB16Q9NRJ7 snoU13.3-201ENST00000459441 104 ntBASIC4.18□□□□□ -1.74
PCDHB16Q9NRJ7 AC018638.3-201ENST00000461273 132 ntBASIC4.18□□□□□ -1.74
PCDHB16Q9NRJ7 RPL23AP65-201ENST00000475608 468 ntBASIC4.18□□□□□ -1.74
PCDHB16Q9NRJ7 HMGN2P25-201ENST00000486956 268 ntBASIC4.18□□□□□ -1.74
PCDHB16Q9NRJ7 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
PCDHB16Q9NRJ7 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC4.18□□□□□ -1.74
PCDHB16Q9NRJ7 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.18□□□□□ -1.74
PCDHB16Q9NRJ7 AC006499.3-201ENST00000506077 748 ntBASIC4.18□□□□□ -1.74
PCDHB16Q9NRJ7 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC4.18□□□□□ -1.74
PCDHB16Q9NRJ7 RNU6-1129P-201ENST00000515964 104 ntBASIC4.18□□□□□ -1.74
PCDHB16Q9NRJ7 RNA5SP216-201ENST00000516111 123 ntBASIC4.18□□□□□ -1.74
PCDHB16Q9NRJ7 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
PCDHB16Q9NRJ7 MAL2-208ENST00000523307 556 ntTSL 4 BASIC4.18□□□□□ -1.74
PCDHB16Q9NRJ7 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC4.18□□□□□ -1.74
PCDHB16Q9NRJ7 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.18□□□□□ -1.74
PCDHB16Q9NRJ7 OR10G5P-201ENST00000532733 358 ntBASIC4.18□□□□□ -1.74
PCDHB16Q9NRJ7 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
PCDHB16Q9NRJ7 UBE2NP1-201ENST00000545592 458 ntBASIC4.18□□□□□ -1.74
PCDHB16Q9NRJ7 MRPS36P5-201ENST00000551909 298 ntBASIC4.18□□□□□ -1.74
PCDHB16Q9NRJ7 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.18□□□□□ -1.74
PCDHB16Q9NRJ7 AC145350.1-201ENST00000567426 208 ntBASIC4.18□□□□□ -1.74
PCDHB16Q9NRJ7 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC4.18□□□□□ -1.74
PCDHB16Q9NRJ7 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.18□□□□□ -1.74
PCDHB16Q9NRJ7 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC4.18□□□□□ -1.74
PCDHB16Q9NRJ7 AC105254.2-201ENST00000603636 436 ntBASIC4.18□□□□□ -1.74
PCDHB16Q9NRJ7 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.18□□□□□ -1.74
PCDHB16Q9NRJ7 AC005084.1-201ENST00000605160 304 ntBASIC4.18□□□□□ -1.74
PCDHB16Q9NRJ7 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.18□□□□□ -1.74
PCDHB16Q9NRJ7 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.18□□□□□ -1.74
PCDHB16Q9NRJ7 AC025588.4-201ENST00000615802 908 ntBASIC4.18□□□□□ -1.74
PCDHB16Q9NRJ7 U73479.1-201ENST00000618062 168 ntBASIC4.18□□□□□ -1.74
PCDHB16Q9NRJ7 MIR6729-201ENST00000618194 65 ntBASIC4.18□□□□□ -1.74
PCDHB16Q9NRJ7 AC067852.7-201ENST00000623270 535 ntBASIC4.18□□□□□ -1.74
PCDHB16Q9NRJ7 AC231657.1-201ENST00000624313 397 ntBASIC4.18□□□□□ -1.74
PCDHB16Q9NRJ7 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC4.18□□□□□ -1.74
PCDHB16Q9NRJ7 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC4.18□□□□□ -1.74
PCDHB16Q9NRJ7 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.18□□□□□ -1.74
PCDHB16Q9NRJ7 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
PCDHB16Q9NRJ7 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.18□□□□□ -1.74
PCDHB16Q9NRJ7 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
PCDHB16Q9NRJ7 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
PCDHB16Q9NRJ7 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.17□□□□□ -1.74
PCDHB16Q9NRJ7 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.17□□□□□ -1.74
PCDHB16Q9NRJ7 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
PCDHB16Q9NRJ7 AC010300.1-201ENST00000600671 5134 ntBASIC4.17□□□□□ -1.74
PCDHB16Q9NRJ7 KARSP3-201ENST00000571212 1504 ntBASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms