Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PDLIM7Q9NR12 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.7□□□□□ -1.5
PDLIM7Q9NR12 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
PDLIM7Q9NR12 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PDLIM7Q9NR12 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
PDLIM7Q9NR12 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PDLIM7Q9NR12 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
PDLIM7Q9NR12 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.69□□□□□ -1.5
PDLIM7Q9NR12 ZNF37BP-203ENST00000452306 1352 ntBASIC5.69□□□□□ -1.5
PDLIM7Q9NR12 TRIM51GP-201ENST00000534741 1350 ntBASIC5.69□□□□□ -1.5
PDLIM7Q9NR12 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
PDLIM7Q9NR12 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
PDLIM7Q9NR12 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
PDLIM7Q9NR12 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
PDLIM7Q9NR12 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
PDLIM7Q9NR12 AC017104.4-201ENST00000636283 1592 ntBASIC5.69□□□□□ -1.5
PDLIM7Q9NR12 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
PDLIM7Q9NR12 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
PDLIM7Q9NR12 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC5.69□□□□□ -1.5
PDLIM7Q9NR12 RNA5SP191-201ENST00000362585 102 ntBASIC5.69□□□□□ -1.5
PDLIM7Q9NR12 Y_RNA.38-201ENST00000362617 102 ntBASIC5.69□□□□□ -1.5
PDLIM7Q9NR12 RNA5SP479-201ENST00000364858 117 ntBASIC5.69□□□□□ -1.5
PDLIM7Q9NR12 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
PDLIM7Q9NR12 RNU6-317P-201ENST00000384031 107 ntBASIC5.69□□□□□ -1.5
PDLIM7Q9NR12 AC025750.1-201ENST00000399891 379 ntBASIC5.69□□□□□ -1.5
PDLIM7Q9NR12 TMSB4XP8-201ENST00000402089 135 ntBASIC5.69□□□□□ -1.5
PDLIM7Q9NR12 HMGB1P11-201ENST00000413899 637 ntBASIC5.69□□□□□ -1.5
PDLIM7Q9NR12 TMSB4XP6-201ENST00000415187 135 ntBASIC5.69□□□□□ -1.5
PDLIM7Q9NR12 AC062016.2-201ENST00000420950 676 ntBASIC5.69□□□□□ -1.5
PDLIM7Q9NR12 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
PDLIM7Q9NR12 TMSB4XP1-201ENST00000424567 135 ntBASIC5.69□□□□□ -1.5
PDLIM7Q9NR12 RSL24D1P6-201ENST00000426934 401 ntBASIC5.69□□□□□ -1.5
PDLIM7Q9NR12 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.69□□□□□ -1.5
PDLIM7Q9NR12 RPL7P11-201ENST00000437586 658 ntBASIC5.69□□□□□ -1.5
PDLIM7Q9NR12 AL450263.2-201ENST00000439400 589 ntBASIC5.69□□□□□ -1.5
PDLIM7Q9NR12 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC5.69□□□□□ -1.5
PDLIM7Q9NR12 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC5.69□□□□□ -1.5
PDLIM7Q9NR12 TXNP5-201ENST00000441043 315 ntBASIC5.69□□□□□ -1.5
PDLIM7Q9NR12 RPL7P59-201ENST00000447700 943 ntBASIC5.69□□□□□ -1.5
PDLIM7Q9NR12 AC243772.1-201ENST00000451620 410 ntBASIC5.69□□□□□ -1.5
PDLIM7Q9NR12 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC5.69□□□□□ -1.5
PDLIM7Q9NR12 AC091951.2-201ENST00000500762 203 ntBASIC5.69□□□□□ -1.5
PDLIM7Q9NR12 GAPDHP56-201ENST00000506031 988 ntBASIC5.69□□□□□ -1.5
PDLIM7Q9NR12 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC5.69□□□□□ -1.5
PDLIM7Q9NR12 AC098976.1-201ENST00000513014 541 ntBASIC5.69□□□□□ -1.5
PDLIM7Q9NR12 MTCO1P30-201ENST00000515244 580 ntBASIC5.69□□□□□ -1.5
PDLIM7Q9NR12 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC5.69□□□□□ -1.5
PDLIM7Q9NR12 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC5.69□□□□□ -1.5
PDLIM7Q9NR12 RGS5-218ENST00000526176 574 ntTSL 4 BASIC5.69□□□□□ -1.5
PDLIM7Q9NR12 OR8A2P-201ENST00000528631 952 ntBASIC5.69□□□□□ -1.5
PDLIM7Q9NR12 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC5.69□□□□□ -1.5
PDLIM7Q9NR12 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
PDLIM7Q9NR12 AC068714.1-201ENST00000559623 800 ntBASIC5.69□□□□□ -1.5
PDLIM7Q9NR12 MTCYBP13-201ENST00000578634 1093 ntBASIC5.69□□□□□ -1.5
PDLIM7Q9NR12 BNIP3P9-201ENST00000603714 553 ntBASIC5.69□□□□□ -1.5
PDLIM7Q9NR12 AL161729.4-201ENST00000604650 476 ntBASIC5.69□□□□□ -1.5
PDLIM7Q9NR12 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC5.69□□□□□ -1.5
PDLIM7Q9NR12 AC055764.2-201ENST00000610089 670 ntBASIC5.69□□□□□ -1.5
PDLIM7Q9NR12 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.69□□□□□ -1.5
PDLIM7Q9NR12 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.69□□□□□ -1.5
PDLIM7Q9NR12 MIR6863-201ENST00000636112 90 ntBASIC5.69□□□□□ -1.5
PDLIM7Q9NR12 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC5.69□□□□□ -1.5
PDLIM7Q9NR12 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
PDLIM7Q9NR12 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
PDLIM7Q9NR12 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
PDLIM7Q9NR12 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
PDLIM7Q9NR12 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
PDLIM7Q9NR12 RPS4XP5-202ENST00000449995 1334 ntBASIC5.69□□□□□ -1.5
PDLIM7Q9NR12 SAMMSON-210ENST00000641260 1308 ntBASIC5.69□□□□□ -1.5
PDLIM7Q9NR12 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC5.69□□□□□ -1.5
PDLIM7Q9NR12 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
PDLIM7Q9NR12 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
PDLIM7Q9NR12 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
PDLIM7Q9NR12 AC133552.1-201ENST00000569988 4007 ntBASIC5.69□□□□□ -1.5
PDLIM7Q9NR12 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
PDLIM7Q9NR12 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
PDLIM7Q9NR12 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PDLIM7Q9NR12 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PDLIM7Q9NR12 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC5.68□□□□□ -1.5
PDLIM7Q9NR12 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PDLIM7Q9NR12 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PDLIM7Q9NR12 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PDLIM7Q9NR12 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PDLIM7Q9NR12 AC009313.2-201ENST00000417893 1941 ntBASIC5.68□□□□□ -1.5
PDLIM7Q9NR12 BCORP1-203ENST00000513194 5093 ntBASIC5.68□□□□□ -1.5
PDLIM7Q9NR12 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PDLIM7Q9NR12 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
PDLIM7Q9NR12 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
PDLIM7Q9NR12 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.68□□□□□ -1.5
PDLIM7Q9NR12 CYP1D1P-201ENST00000416662 1433 ntBASIC5.68□□□□□ -1.5
PDLIM7Q9NR12 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
PDLIM7Q9NR12 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
PDLIM7Q9NR12 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PDLIM7Q9NR12 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PDLIM7Q9NR12 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
PDLIM7Q9NR12 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PDLIM7Q9NR12 RNU6-492P-201ENST00000363035 104 ntBASIC5.68□□□□□ -1.5
PDLIM7Q9NR12 Y_RNA.126-201ENST00000363382 111 ntBASIC5.68□□□□□ -1.5
PDLIM7Q9NR12 RNU4-76P-201ENST00000364509 141 ntBASIC5.68□□□□□ -1.5
PDLIM7Q9NR12 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms