Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
HPS4Q9NQG7 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
HPS4Q9NQG7 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
HPS4Q9NQG7 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.1□□□□□ -1.75
HPS4Q9NQG7 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
HPS4Q9NQG7 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC4.1□□□□□ -1.75
HPS4Q9NQG7 MIR23A-201ENST00000385245 73 ntBASIC4.1□□□□□ -1.75
HPS4Q9NQG7 HMGB3P19-201ENST00000403971 560 ntBASIC4.1□□□□□ -1.75
HPS4Q9NQG7 AL445183.3-201ENST00000414168 502 ntBASIC4.1□□□□□ -1.75
HPS4Q9NQG7 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC4.1□□□□□ -1.75
HPS4Q9NQG7 AC073310.1-201ENST00000423226 1033 ntBASIC4.1□□□□□ -1.75
HPS4Q9NQG7 AL031736.2-201ENST00000426573 787 ntBASIC4.1□□□□□ -1.75
HPS4Q9NQG7 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC4.1□□□□□ -1.75
HPS4Q9NQG7 RPS7P5-201ENST00000441482 581 ntBASIC4.1□□□□□ -1.75
HPS4Q9NQG7 RAD23BP3-201ENST00000454157 1152 ntBASIC4.1□□□□□ -1.75
HPS4Q9NQG7 FTH1P24-201ENST00000503502 462 ntBASIC4.1□□□□□ -1.75
HPS4Q9NQG7 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC4.1□□□□□ -1.75
HPS4Q9NQG7 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
HPS4Q9NQG7 AC083923.1-201ENST00000523708 376 ntBASIC4.1□□□□□ -1.75
HPS4Q9NQG7 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.1□□□□□ -1.75
HPS4Q9NQG7 CYCSP30-201ENST00000546447 172 ntBASIC4.1□□□□□ -1.75
HPS4Q9NQG7 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC4.1□□□□□ -1.75
HPS4Q9NQG7 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.1□□□□□ -1.75
HPS4Q9NQG7 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC4.1□□□□□ -1.75
HPS4Q9NQG7 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC4.1□□□□□ -1.75
HPS4Q9NQG7 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.1□□□□□ -1.75
HPS4Q9NQG7 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.1□□□□□ -1.75
HPS4Q9NQG7 AC125494.3-201ENST00000602759 455 ntBASIC4.1□□□□□ -1.75
HPS4Q9NQG7 AL049634.3-201ENST00000604968 457 ntBASIC4.1□□□□□ -1.75
HPS4Q9NQG7 SNORA51-201ENST00000606420 132 ntBASIC4.1□□□□□ -1.75
HPS4Q9NQG7 MIR8084-201ENST00000614105 89 ntBASIC4.1□□□□□ -1.75
HPS4Q9NQG7 FRG1HP-204ENST00000617940 757 ntBASIC4.1□□□□□ -1.75
HPS4Q9NQG7 AC073569.3-201ENST00000619055 682 ntBASIC4.1□□□□□ -1.75
HPS4Q9NQG7 AC024595.1-201ENST00000623088 387 ntBASIC4.1□□□□□ -1.75
HPS4Q9NQG7 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
HPS4Q9NQG7 AC022031.1-201ENST00000585985 2593 ntBASIC4.1□□□□□ -1.75
HPS4Q9NQG7 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.1□□□□□ -1.75
HPS4Q9NQG7 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.1□□□□□ -1.75
HPS4Q9NQG7 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
HPS4Q9NQG7 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
HPS4Q9NQG7 EXOC5P1-201ENST00000510543 1969 ntBASIC4.09□□□□□ -1.75
HPS4Q9NQG7 AL133383.2-201ENST00000622958 2336 ntBASIC4.09□□□□□ -1.75
HPS4Q9NQG7 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
HPS4Q9NQG7 ENSAP3-201ENST00000312710 333 ntBASIC4.09□□□□□ -1.75
HPS4Q9NQG7 SNORD56.4-201ENST00000363883 71 ntBASIC4.09□□□□□ -1.75
HPS4Q9NQG7 RNA5SP399-201ENST00000364003 117 ntBASIC4.09□□□□□ -1.75
HPS4Q9NQG7 SNORD6-201ENST00000365444 73 ntBASIC4.09□□□□□ -1.75
HPS4Q9NQG7 SNORA57.3-201ENST00000411095 141 ntBASIC4.09□□□□□ -1.75
HPS4Q9NQG7 PGBD4P8-201ENST00000412993 562 ntBASIC4.09□□□□□ -1.75
HPS4Q9NQG7 AC093578.1-201ENST00000415219 368 ntBASIC4.09□□□□□ -1.75
HPS4Q9NQG7 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC4.09□□□□□ -1.75
HPS4Q9NQG7 MTND2P15-201ENST00000418575 892 ntBASIC4.09□□□□□ -1.75
HPS4Q9NQG7 PTP4A1P5-201ENST00000420305 455 ntBASIC4.09□□□□□ -1.75
HPS4Q9NQG7 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.09□□□□□ -1.75
HPS4Q9NQG7 AC093422.3-201ENST00000428506 305 ntBASIC4.09□□□□□ -1.75
HPS4Q9NQG7 NPM1P34-201ENST00000428821 893 ntBASIC4.09□□□□□ -1.75
HPS4Q9NQG7 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC4.09□□□□□ -1.75
HPS4Q9NQG7 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC4.09□□□□□ -1.75
HPS4Q9NQG7 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC4.09□□□□□ -1.75
HPS4Q9NQG7 RPL7P55-201ENST00000450522 746 ntBASIC4.09□□□□□ -1.75
HPS4Q9NQG7 PPIAP3-201ENST00000450588 505 ntBASIC4.09□□□□□ -1.75
HPS4Q9NQG7 AL035407.2-201ENST00000454090 378 ntBASIC4.09□□□□□ -1.75
HPS4Q9NQG7 HMGN2P7-201ENST00000456186 273 ntBASIC4.09□□□□□ -1.75
HPS4Q9NQG7 RPS20P21-201ENST00000466859 343 ntBASIC4.09□□□□□ -1.75
HPS4Q9NQG7 AC008565.1-201ENST00000509046 885 ntBASIC4.09□□□□□ -1.75
HPS4Q9NQG7 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC4.09□□□□□ -1.75
HPS4Q9NQG7 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.09□□□□□ -1.75
HPS4Q9NQG7 PAICSP4-201ENST00000517543 1253 ntBASIC4.09□□□□□ -1.75
HPS4Q9NQG7 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
HPS4Q9NQG7 NAT2-202ENST00000520116 716 ntTSL 3 BASIC4.09□□□□□ -1.75
HPS4Q9NQG7 AC008562.1-201ENST00000521763 330 ntBASIC4.09□□□□□ -1.75
HPS4Q9NQG7 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC4.09□□□□□ -1.75
HPS4Q9NQG7 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC4.09□□□□□ -1.75
HPS4Q9NQG7 CCNG2P1-201ENST00000549521 1000 ntBASIC4.09□□□□□ -1.75
HPS4Q9NQG7 AC107016.1-201ENST00000550463 337 ntBASIC4.09□□□□□ -1.75
HPS4Q9NQG7 AC087499.8-201ENST00000578406 226 ntBASIC4.09□□□□□ -1.75
HPS4Q9NQG7 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.09□□□□□ -1.75
HPS4Q9NQG7 AC069304.3-201ENST00000603938 1084 ntBASIC4.09□□□□□ -1.75
HPS4Q9NQG7 AC245100.7-201ENST00000609678 442 ntBASIC4.09□□□□□ -1.75
HPS4Q9NQG7 AC244100.1-202ENST00000621554 382 ntBASIC4.09□□□□□ -1.75
HPS4Q9NQG7 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.09□□□□□ -1.75
HPS4Q9NQG7 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
HPS4Q9NQG7 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
HPS4Q9NQG7 AL049737.1-201ENST00000413920 1403 ntBASIC4.09□□□□□ -1.75
HPS4Q9NQG7 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
HPS4Q9NQG7 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
HPS4Q9NQG7 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
HPS4Q9NQG7 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.08□□□□□ -1.76
HPS4Q9NQG7 RNA5SP387-201ENST00000364226 106 ntBASIC4.08□□□□□ -1.76
HPS4Q9NQG7 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
HPS4Q9NQG7 ZNF603P-201ENST00000405613 487 ntBASIC4.08□□□□□ -1.76
HPS4Q9NQG7 RNU2-65P-201ENST00000410162 185 ntBASIC4.08□□□□□ -1.76
HPS4Q9NQG7 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC4.08□□□□□ -1.76
HPS4Q9NQG7 YME1L1P1-201ENST00000429435 297 ntBASIC4.08□□□□□ -1.76
HPS4Q9NQG7 MTCO1P43-201ENST00000431831 488 ntBASIC4.08□□□□□ -1.76
HPS4Q9NQG7 TRIM60P3Y-201ENST00000432201 673 ntBASIC4.08□□□□□ -1.76
HPS4Q9NQG7 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC4.08□□□□□ -1.76
HPS4Q9NQG7 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
HPS4Q9NQG7 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.08□□□□□ -1.76
HPS4Q9NQG7 AL133477.1-201ENST00000457472 514 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms