Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 DNAJC19P1-201ENST00000455312 319 ntBASIC4.94□□□□□ -1.62
SCAPERQ9BY12 RPS4XP2-201ENST00000458402 793 ntBASIC4.94□□□□□ -1.62
SCAPERQ9BY12 OR2A20P-203ENST00000498397 1268 ntBASIC4.94□□□□□ -1.62
SCAPERQ9BY12 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.94□□□□□ -1.62
SCAPERQ9BY12 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC4.94□□□□□ -1.62
SCAPERQ9BY12 AC091826.1-201ENST00000514065 313 ntBASIC4.94□□□□□ -1.62
SCAPERQ9BY12 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC4.94□□□□□ -1.62
SCAPERQ9BY12 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC4.94□□□□□ -1.62
SCAPERQ9BY12 AL365361.1-201ENST00000566942 3481 ntBASIC4.94□□□□□ -1.62
SCAPERQ9BY12 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC4.94□□□□□ -1.62
SCAPERQ9BY12 Z98941.1-201ENST00000407764 100 ntBASIC4.93□□□□□ -1.62
SCAPERQ9BY12 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC4.93□□□□□ -1.62
SCAPERQ9BY12 AC006989.1-201ENST00000427212 131 ntBASIC4.93□□□□□ -1.62
SCAPERQ9BY12 RPS26P47-201ENST00000427219 348 ntBASIC4.93□□□□□ -1.62
SCAPERQ9BY12 BX890604.2-201ENST00000427883 474 ntBASIC4.93□□□□□ -1.62
SCAPERQ9BY12 AL139132.1-201ENST00000431587 344 ntBASIC4.93□□□□□ -1.62
SCAPERQ9BY12 VN1R104P-201ENST00000505115 1009 ntBASIC4.93□□□□□ -1.62
SCAPERQ9BY12 AC010486.1-201ENST00000511793 424 ntBASIC4.93□□□□□ -1.62
SCAPERQ9BY12 AC006518.1-201ENST00000541449 943 ntBASIC4.93□□□□□ -1.62
SCAPERQ9BY12 UBL5P2-201ENST00000583788 219 ntBASIC4.93□□□□□ -1.62
SCAPERQ9BY12 OR2AS2P-201ENST00000606902 342 ntBASIC4.93□□□□□ -1.62
SCAPERQ9BY12 AL157817.1-201ENST00000614264 790 ntBASIC4.93□□□□□ -1.62
SCAPERQ9BY12 AL356321.1-201ENST00000621360 228 ntBASIC4.93□□□□□ -1.62
SCAPERQ9BY12 AC244205.2-202ENST00000635781 342 ntBASIC4.93□□□□□ -1.62
SCAPERQ9BY12 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.93□□□□□ -1.62
SCAPERQ9BY12 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SCAPERQ9BY12 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.93□□□□□ -1.62
SCAPERQ9BY12 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SCAPERQ9BY12 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SCAPERQ9BY12 NACAP7-201ENST00000407371 609 ntBASIC4.92□□□□□ -1.62
SCAPERQ9BY12 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC4.92□□□□□ -1.62
SCAPERQ9BY12 TEX41-209ENST00000451478 452 ntTSL 2 BASIC4.92□□□□□ -1.62
SCAPERQ9BY12 AC005229.2-201ENST00000456995 399 ntBASIC4.92□□□□□ -1.62
SCAPERQ9BY12 RPS29P26-201ENST00000477483 171 ntBASIC4.92□□□□□ -1.62
SCAPERQ9BY12 AF186190.1-201ENST00000517470 480 ntBASIC4.92□□□□□ -1.62
SCAPERQ9BY12 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.92□□□□□ -1.62
SCAPERQ9BY12 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC4.92□□□□□ -1.62
SCAPERQ9BY12 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC4.92□□□□□ -1.62
SCAPERQ9BY12 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SCAPERQ9BY12 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SCAPERQ9BY12 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SCAPERQ9BY12 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
SCAPERQ9BY12 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC4.91□□□□□ -1.62
SCAPERQ9BY12 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC4.91□□□□□ -1.62
SCAPERQ9BY12 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC4.91□□□□□ -1.62
SCAPERQ9BY12 AC005242.1-201ENST00000585658 438 ntBASIC4.91□□□□□ -1.62
SCAPERQ9BY12 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
SCAPERQ9BY12 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
SCAPERQ9BY12 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SCAPERQ9BY12 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
SCAPERQ9BY12 AC006504.1-201ENST00000562493 3666 ntBASIC4.9□□□□□ -1.62
SCAPERQ9BY12 OR5J1P-201ENST00000313544 939 ntBASIC4.9□□□□□ -1.62
SCAPERQ9BY12 IPMKP1-201ENST00000425988 855 ntBASIC4.9□□□□□ -1.62
SCAPERQ9BY12 PTP4A1P3-201ENST00000433661 420 ntBASIC4.9□□□□□ -1.62
SCAPERQ9BY12 AC233982.1-201ENST00000451247 436 ntBASIC4.9□□□□□ -1.62
SCAPERQ9BY12 RPL31P50-201ENST00000471002 296 ntBASIC4.9□□□□□ -1.62
SCAPERQ9BY12 RPL23AP73-201ENST00000492507 471 ntBASIC4.9□□□□□ -1.62
SCAPERQ9BY12 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC4.9□□□□□ -1.62
SCAPERQ9BY12 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC4.9□□□□□ -1.62
SCAPERQ9BY12 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC4.9□□□□□ -1.62
SCAPERQ9BY12 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC4.9□□□□□ -1.62
SCAPERQ9BY12 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.9□□□□□ -1.62
SCAPERQ9BY12 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC4.9□□□□□ -1.63
SCAPERQ9BY12 RIOK3P1-201ENST00000418778 1528 ntBASIC4.9□□□□□ -1.63
SCAPERQ9BY12 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.9□□□□□ -1.63
SCAPERQ9BY12 OR5BR1P-201ENST00000524992 1330 ntBASIC4.9□□□□□ -1.63
SCAPERQ9BY12 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
SCAPERQ9BY12 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
SCAPERQ9BY12 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.9□□□□□ -1.63
SCAPERQ9BY12 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
SCAPERQ9BY12 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SCAPERQ9BY12 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
SCAPERQ9BY12 SKP1P1-201ENST00000438081 489 ntBASIC4.89□□□□□ -1.63
SCAPERQ9BY12 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC4.89□□□□□ -1.63
SCAPERQ9BY12 RPL7P59-201ENST00000447700 943 ntBASIC4.89□□□□□ -1.63
SCAPERQ9BY12 AC002553.2-201ENST00000453217 340 ntBASIC4.89□□□□□ -1.63
SCAPERQ9BY12 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC4.89□□□□□ -1.63
SCAPERQ9BY12 AC010307.1-201ENST00000467206 836 ntBASIC4.89□□□□□ -1.63
SCAPERQ9BY12 NDUFB9P3-201ENST00000521269 501 ntBASIC4.89□□□□□ -1.63
SCAPERQ9BY12 GTF3AP2-201ENST00000557014 266 ntBASIC4.89□□□□□ -1.63
SCAPERQ9BY12 IDE-202ENST00000371581 4480 ntTSL 2 BASIC4.89□□□□□ -1.63
SCAPERQ9BY12 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC4.89□□□□□ -1.63
SCAPERQ9BY12 C4orf33-202ENST00000425929 1588 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
SCAPERQ9BY12 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SCAPERQ9BY12 AL365396.1-201ENST00000430854 671 ntBASIC4.89□□□□□ -1.63
SCAPERQ9BY12 AC000041.1-201ENST00000439655 175 ntBASIC4.89□□□□□ -1.63
SCAPERQ9BY12 NARSP2-201ENST00000518524 679 ntBASIC4.89□□□□□ -1.63
SCAPERQ9BY12 AC087888.1-201ENST00000550884 1254 ntBASIC4.89□□□□□ -1.63
SCAPERQ9BY12 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SCAPERQ9BY12 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC4.89□□□□□ -1.63
SCAPERQ9BY12 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
SCAPERQ9BY12 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC4.88□□□□□ -1.63
SCAPERQ9BY12 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SCAPERQ9BY12 MTND4P10-201ENST00000446199 1363 ntBASIC4.88□□□□□ -1.63
SCAPERQ9BY12 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SCAPERQ9BY12 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC4.88□□□□□ -1.63
SCAPERQ9BY12 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SCAPERQ9BY12 RN7SKP116-201ENST00000516902 319 ntBASIC4.88□□□□□ -1.63
SCAPERQ9BY12 OR5AP1P-201ENST00000529730 940 ntBASIC4.88□□□□□ -1.63
SCAPERQ9BY12 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms