Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 RNU1-85P-201ENST00000364127 164 ntBASIC3.37□□□□□ -1.87
CHRDL1Q9BU40 RNU6-629P-201ENST00000384061 103 ntBASIC3.37□□□□□ -1.87
CHRDL1Q9BU40 U1.1-201ENST00000384101 164 ntBASIC3.37□□□□□ -1.87
CHRDL1Q9BU40 MIR129-1-201ENST00000384972 72 ntBASIC3.37□□□□□ -1.87
CHRDL1Q9BU40 RPL31P1-201ENST00000398116 372 ntBASIC3.37□□□□□ -1.87
CHRDL1Q9BU40 RNA5SP56-201ENST00000410277 118 ntBASIC3.37□□□□□ -1.87
CHRDL1Q9BU40 RNA5SP306-201ENST00000411087 107 ntBASIC3.37□□□□□ -1.87
CHRDL1Q9BU40 TRIM60P5Y-201ENST00000413946 574 ntBASIC3.37□□□□□ -1.87
CHRDL1Q9BU40 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.37□□□□□ -1.87
CHRDL1Q9BU40 AL606495.1-201ENST00000422100 813 ntBASIC3.37□□□□□ -1.87
CHRDL1Q9BU40 AC233981.1-201ENST00000423224 461 ntBASIC3.37□□□□□ -1.87
CHRDL1Q9BU40 DNAJC19P7-201ENST00000428811 344 ntBASIC3.37□□□□□ -1.87
CHRDL1Q9BU40 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC3.37□□□□□ -1.87
CHRDL1Q9BU40 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC3.37□□□□□ -1.87
CHRDL1Q9BU40 AC002542.1-201ENST00000440683 193 ntBASIC3.37□□□□□ -1.87
CHRDL1Q9BU40 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC3.37□□□□□ -1.87
CHRDL1Q9BU40 RPL7P52-201ENST00000449200 742 ntBASIC3.37□□□□□ -1.87
CHRDL1Q9BU40 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC3.37□□□□□ -1.87
CHRDL1Q9BU40 AC009220.1-201ENST00000451614 275 ntBASIC3.37□□□□□ -1.87
CHRDL1Q9BU40 RNU7-170P-201ENST00000459303 61 ntBASIC3.37□□□□□ -1.87
CHRDL1Q9BU40 RPL7P22-201ENST00000466005 733 ntBASIC3.37□□□□□ -1.87
CHRDL1Q9BU40 RPL7P1-201ENST00000468161 747 ntBASIC3.37□□□□□ -1.87
CHRDL1Q9BU40 AC092902.1-201ENST00000486999 259 ntBASIC3.37□□□□□ -1.87
CHRDL1Q9BU40 RN7SL812P-201ENST00000493791 279 ntBASIC3.37□□□□□ -1.87
CHRDL1Q9BU40 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC3.37□□□□□ -1.87
CHRDL1Q9BU40 AK3P4-201ENST00000504283 583 ntBASIC3.37□□□□□ -1.87
CHRDL1Q9BU40 MTND3P3-201ENST00000505004 126 ntBASIC3.37□□□□□ -1.87
CHRDL1Q9BU40 HMGB1P22-201ENST00000505315 124 ntBASIC3.37□□□□□ -1.87
CHRDL1Q9BU40 AC106806.2-201ENST00000509365 500 ntBASIC3.37□□□□□ -1.87
CHRDL1Q9BU40 KCTD9P2-201ENST00000512203 1013 ntBASIC3.37□□□□□ -1.87
CHRDL1Q9BU40 HMGN1P15-201ENST00000513870 295 ntBASIC3.37□□□□□ -1.87
CHRDL1Q9BU40 RAB9BP1-201ENST00000519581 626 ntBASIC3.37□□□□□ -1.87
CHRDL1Q9BU40 HIGD1AP10-201ENST00000527837 282 ntBASIC3.37□□□□□ -1.87
CHRDL1Q9BU40 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.37□□□□□ -1.87
CHRDL1Q9BU40 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC3.37□□□□□ -1.87
CHRDL1Q9BU40 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC3.37□□□□□ -1.87
CHRDL1Q9BU40 AL360157.1-201ENST00000565962 87 ntBASIC3.37□□□□□ -1.87
CHRDL1Q9BU40 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC3.37□□□□□ -1.87
CHRDL1Q9BU40 AC010735.1-201ENST00000567305 1026 ntBASIC3.37□□□□□ -1.87
CHRDL1Q9BU40 AC074051.3-201ENST00000570238 358 ntBASIC3.37□□□□□ -1.87
CHRDL1Q9BU40 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC3.37□□□□□ -1.87
CHRDL1Q9BU40 AL669831.4-202ENST00000590817 238 ntBASIC3.37□□□□□ -1.87
CHRDL1Q9BU40 HMGB1P50-201ENST00000605814 607 ntBASIC3.37□□□□□ -1.87
CHRDL1Q9BU40 VN1R9P-201ENST00000614184 867 ntBASIC3.37□□□□□ -1.87
CHRDL1Q9BU40 AC105227.2-201ENST00000615075 605 ntBASIC3.37□□□□□ -1.87
CHRDL1Q9BU40 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC3.37□□□□□ -1.87
CHRDL1Q9BU40 AC006963.1-201ENST00000624003 1052 ntBASIC3.37□□□□□ -1.87
CHRDL1Q9BU40 AC008785.1-201ENST00000624475 456 ntBASIC3.37□□□□□ -1.87
CHRDL1Q9BU40 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.37□□□□□ -1.87
CHRDL1Q9BU40 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
CHRDL1Q9BU40 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
CHRDL1Q9BU40 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CHRDL1Q9BU40 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.37□□□□□ -1.87
CHRDL1Q9BU40 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CHRDL1Q9BU40 ACTR3BP2-202ENST00000623630 1338 ntBASIC3.37□□□□□ -1.87
CHRDL1Q9BU40 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.37□□□□□ -1.87
CHRDL1Q9BU40 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
CHRDL1Q9BU40 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.37□□□□□ -1.87
CHRDL1Q9BU40 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.37□□□□□ -1.87
CHRDL1Q9BU40 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.37□□□□□ -1.87
CHRDL1Q9BU40 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
CHRDL1Q9BU40 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CHRDL1Q9BU40 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CHRDL1Q9BU40 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC3.36□□□□□ -1.87
CHRDL1Q9BU40 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.36□□□□□ -1.87
CHRDL1Q9BU40 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CHRDL1Q9BU40 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CHRDL1Q9BU40 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC3.36□□□□□ -1.87
CHRDL1Q9BU40 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CHRDL1Q9BU40 OR5P1P-201ENST00000299512 925 ntBASIC3.36□□□□□ -1.87
CHRDL1Q9BU40 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC3.36□□□□□ -1.87
CHRDL1Q9BU40 MIR331-201ENST00000362302 94 ntBASIC3.36□□□□□ -1.87
CHRDL1Q9BU40 RNA5SP295-201ENST00000362655 121 ntBASIC3.36□□□□□ -1.87
CHRDL1Q9BU40 SNORA63.3-201ENST00000362682 132 ntBASIC3.36□□□□□ -1.87
CHRDL1Q9BU40 RNU6-263P-201ENST00000363811 107 ntBASIC3.36□□□□□ -1.87
CHRDL1Q9BU40 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CHRDL1Q9BU40 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CHRDL1Q9BU40 MIR141-201ENST00000384975 95 ntBASIC3.36□□□□□ -1.87
CHRDL1Q9BU40 SNORD66.1-201ENST00000391230 76 ntBASIC3.36□□□□□ -1.87
CHRDL1Q9BU40 RPS3AP23-201ENST00000401762 784 ntBASIC3.36□□□□□ -1.87
CHRDL1Q9BU40 AL583834.1-201ENST00000406943 343 ntBASIC3.36□□□□□ -1.87
CHRDL1Q9BU40 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
CHRDL1Q9BU40 MTHFD2P2-201ENST00000407725 247 ntBASIC3.36□□□□□ -1.87
CHRDL1Q9BU40 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.36□□□□□ -1.87
CHRDL1Q9BU40 AL445183.3-201ENST00000414168 502 ntBASIC3.36□□□□□ -1.87
CHRDL1Q9BU40 AL356387.2-201ENST00000422272 243 ntBASIC3.36□□□□□ -1.87
CHRDL1Q9BU40 AC009480.2-201ENST00000422916 432 ntBASIC3.36□□□□□ -1.87
CHRDL1Q9BU40 RPP40P1-201ENST00000426762 456 ntBASIC3.36□□□□□ -1.87
CHRDL1Q9BU40 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC3.36□□□□□ -1.87
CHRDL1Q9BU40 USP9YP31-201ENST00000431405 881 ntBASIC3.36□□□□□ -1.87
CHRDL1Q9BU40 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.36□□□□□ -1.87
CHRDL1Q9BU40 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC3.36□□□□□ -1.87
CHRDL1Q9BU40 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC3.36□□□□□ -1.87
CHRDL1Q9BU40 SETP5-201ENST00000437270 562 ntBASIC3.36□□□□□ -1.87
CHRDL1Q9BU40 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC3.36□□□□□ -1.87
CHRDL1Q9BU40 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC3.36□□□□□ -1.87
CHRDL1Q9BU40 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.36□□□□□ -1.87
CHRDL1Q9BU40 NPM1P13-201ENST00000452663 865 ntBASIC3.36□□□□□ -1.87
CHRDL1Q9BU40 RPS24P6-201ENST00000452670 400 ntBASIC3.36□□□□□ -1.87
CHRDL1Q9BU40 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms