Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 AC005962.2-201ENST00000611427 652 ntBASIC4.77□□□□□ -1.65
ATP2A3Q93084 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
ATP2A3Q93084 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC4.77□□□□□ -1.65
ATP2A3Q93084 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.77□□□□□ -1.65
ATP2A3Q93084 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.77□□□□□ -1.65
ATP2A3Q93084 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.77□□□□□ -1.65
ATP2A3Q93084 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
ATP2A3Q93084 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
ATP2A3Q93084 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.76□□□□□ -1.65
ATP2A3Q93084 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.76□□□□□ -1.65
ATP2A3Q93084 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
ATP2A3Q93084 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
ATP2A3Q93084 AL355852.1-201ENST00000454081 1771 ntBASIC4.76□□□□□ -1.65
ATP2A3Q93084 EOGT-210ENST00000615922 1931 ntBASIC4.76□□□□□ -1.65
ATP2A3Q93084 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
ATP2A3Q93084 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
ATP2A3Q93084 MFSD8-242ENST00000641690 4199 ntBASIC4.76□□□□□ -1.65
ATP2A3Q93084 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.76□□□□□ -1.65
ATP2A3Q93084 OR56B2P-201ENST00000317102 954 ntBASIC4.76□□□□□ -1.65
ATP2A3Q93084 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
ATP2A3Q93084 RN7SKP227-201ENST00000364445 330 ntBASIC4.76□□□□□ -1.65
ATP2A3Q93084 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
ATP2A3Q93084 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.76□□□□□ -1.65
ATP2A3Q93084 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC4.76□□□□□ -1.65
ATP2A3Q93084 SNORD116-1-201ENST00000384335 95 ntBASIC4.76□□□□□ -1.65
ATP2A3Q93084 GSTA8P-201ENST00000404253 637 ntBASIC4.76□□□□□ -1.65
ATP2A3Q93084 PRRC2CP1-201ENST00000404428 159 ntBASIC4.76□□□□□ -1.65
ATP2A3Q93084 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
ATP2A3Q93084 RAP1BP1-201ENST00000412709 553 ntBASIC4.76□□□□□ -1.65
ATP2A3Q93084 MORF4L1P6-201ENST00000418771 268 ntBASIC4.76□□□□□ -1.65
ATP2A3Q93084 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.76□□□□□ -1.65
ATP2A3Q93084 RPL7P53-201ENST00000421245 739 ntBASIC4.76□□□□□ -1.65
ATP2A3Q93084 AL356387.2-201ENST00000422272 243 ntBASIC4.76□□□□□ -1.65
ATP2A3Q93084 AC234779.1-201ENST00000425910 285 ntBASIC4.76□□□□□ -1.65
ATP2A3Q93084 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC4.76□□□□□ -1.65
ATP2A3Q93084 RPP40P1-201ENST00000426762 456 ntBASIC4.76□□□□□ -1.65
ATP2A3Q93084 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC4.76□□□□□ -1.65
ATP2A3Q93084 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC4.76□□□□□ -1.65
ATP2A3Q93084 RPL23AP15-201ENST00000450202 459 ntBASIC4.76□□□□□ -1.65
ATP2A3Q93084 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC4.76□□□□□ -1.65
ATP2A3Q93084 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.76□□□□□ -1.65
ATP2A3Q93084 RPL23AP24-201ENST00000458203 385 ntBASIC4.76□□□□□ -1.65
ATP2A3Q93084 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
ATP2A3Q93084 AC109327.1-201ENST00000471666 403 ntBASIC4.76□□□□□ -1.65
ATP2A3Q93084 DYNLL1P6-201ENST00000503440 264 ntBASIC4.76□□□□□ -1.65
ATP2A3Q93084 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC4.76□□□□□ -1.65
ATP2A3Q93084 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC4.76□□□□□ -1.65
ATP2A3Q93084 MRPS33P3-201ENST00000513456 322 ntBASIC4.76□□□□□ -1.65
ATP2A3Q93084 DEFB109D-201ENST00000529497 240 ntBASIC4.76□□□□□ -1.65
ATP2A3Q93084 ERP27-202ENST00000540097 993 ntTSL 2 BASIC4.76□□□□□ -1.65
ATP2A3Q93084 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC4.76□□□□□ -1.65
ATP2A3Q93084 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
ATP2A3Q93084 AC125611.1-201ENST00000549563 229 ntBASIC4.76□□□□□ -1.65
ATP2A3Q93084 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC4.76□□□□□ -1.65
ATP2A3Q93084 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC4.76□□□□□ -1.65
ATP2A3Q93084 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
ATP2A3Q93084 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC4.76□□□□□ -1.65
ATP2A3Q93084 BNIP3P26-201ENST00000600827 554 ntBASIC4.76□□□□□ -1.65
ATP2A3Q93084 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC4.76□□□□□ -1.65
ATP2A3Q93084 AL109653.1-201ENST00000603091 248 ntBASIC4.76□□□□□ -1.65
ATP2A3Q93084 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC4.76□□□□□ -1.65
ATP2A3Q93084 AC010680.3-201ENST00000604215 520 ntBASIC4.76□□□□□ -1.65
ATP2A3Q93084 AC091488.1-201ENST00000604239 660 ntBASIC4.76□□□□□ -1.65
ATP2A3Q93084 AC080013.3-201ENST00000606839 578 ntBASIC4.76□□□□□ -1.65
ATP2A3Q93084 AL360219.1-201ENST00000610230 366 ntBASIC4.76□□□□□ -1.65
ATP2A3Q93084 VIS1.1-201ENST00000610517 203 ntBASIC4.76□□□□□ -1.65
ATP2A3Q93084 AC122108.2-201ENST00000611946 526 ntBASIC4.76□□□□□ -1.65
ATP2A3Q93084 MIR6716-201ENST00000613413 80 ntBASIC4.76□□□□□ -1.65
ATP2A3Q93084 AC008121.2-201ENST00000614647 523 ntBASIC4.76□□□□□ -1.65
ATP2A3Q93084 AC009090.3-201ENST00000616553 565 ntBASIC4.76□□□□□ -1.65
ATP2A3Q93084 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.76□□□□□ -1.65
ATP2A3Q93084 MIR3974-201ENST00000637126 96 ntBASIC4.76□□□□□ -1.65
ATP2A3Q93084 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
ATP2A3Q93084 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
ATP2A3Q93084 AC025031.4-201ENST00000621248 3271 ntBASIC4.76□□□□□ -1.65
ATP2A3Q93084 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.76□□□□□ -1.65
ATP2A3Q93084 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.76□□□□□ -1.65
ATP2A3Q93084 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.76□□□□□ -1.65
ATP2A3Q93084 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.75□□□□□ -1.65
ATP2A3Q93084 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
ATP2A3Q93084 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
ATP2A3Q93084 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
ATP2A3Q93084 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
ATP2A3Q93084 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
ATP2A3Q93084 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
ATP2A3Q93084 AC021146.4-201ENST00000309229 279 ntBASIC4.75□□□□□ -1.65
ATP2A3Q93084 Y_RNA.192-201ENST00000363977 102 ntBASIC4.75□□□□□ -1.65
ATP2A3Q93084 MIR195-201ENST00000385194 87 ntBASIC4.75□□□□□ -1.65
ATP2A3Q93084 SNORD96B-201ENST00000386148 79 ntBASIC4.75□□□□□ -1.65
ATP2A3Q93084 TAF9BP1-201ENST00000396646 746 ntBASIC4.75□□□□□ -1.65
ATP2A3Q93084 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC4.75□□□□□ -1.65
ATP2A3Q93084 MTND4P22-201ENST00000413116 1169 ntBASIC4.75□□□□□ -1.65
ATP2A3Q93084 OR51A3P-201ENST00000413596 924 ntBASIC4.75□□□□□ -1.65
ATP2A3Q93084 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC4.75□□□□□ -1.65
ATP2A3Q93084 RPL7AP25-201ENST00000423357 805 ntBASIC4.75□□□□□ -1.65
ATP2A3Q93084 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC4.75□□□□□ -1.65
ATP2A3Q93084 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC4.75□□□□□ -1.65
ATP2A3Q93084 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC4.75□□□□□ -1.65
ATP2A3Q93084 MTCO1P54-201ENST00000430139 712 ntBASIC4.75□□□□□ -1.65
ATP2A3Q93084 AL365396.1-201ENST00000430854 671 ntBASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms