Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC5.23□□□□□ -1.57
TOPBP1Q92547 LSM1P2-201ENST00000604911 322 ntBASIC5.23□□□□□ -1.57
TOPBP1Q92547 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
TOPBP1Q92547 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC5.23□□□□□ -1.57
TOPBP1Q92547 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
TOPBP1Q92547 OR51C1P-202ENST00000641159 1444 ntBASIC5.23□□□□□ -1.57
TOPBP1Q92547 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
TOPBP1Q92547 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
TOPBP1Q92547 RN7SKP56-201ENST00000410513 331 ntBASIC5.23□□□□□ -1.57
TOPBP1Q92547 ETF1P3-201ENST00000430422 1160 ntBASIC5.23□□□□□ -1.57
TOPBP1Q92547 SKP1P1-201ENST00000438081 489 ntBASIC5.23□□□□□ -1.57
TOPBP1Q92547 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC5.23□□□□□ -1.57
TOPBP1Q92547 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC5.23□□□□□ -1.57
TOPBP1Q92547 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.23□□□□□ -1.57
TOPBP1Q92547 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
TOPBP1Q92547 CYCSP39-201ENST00000565821 309 ntBASIC5.23□□□□□ -1.57
TOPBP1Q92547 AC010149.2-201ENST00000637608 315 ntBASIC5.23□□□□□ -1.57
TOPBP1Q92547 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
TOPBP1Q92547 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
TOPBP1Q92547 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC5.22□□□□□ -1.57
TOPBP1Q92547 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC5.22□□□□□ -1.57
TOPBP1Q92547 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.22□□□□□ -1.57
TOPBP1Q92547 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
TOPBP1Q92547 AL645937.1-202ENST00000421799 937 ntBASIC5.22□□□□□ -1.57
TOPBP1Q92547 AC011242.1-201ENST00000433596 1158 ntBASIC5.22□□□□□ -1.57
TOPBP1Q92547 RPL21P112-201ENST00000434403 463 ntBASIC5.22□□□□□ -1.57
TOPBP1Q92547 HNRNPKP5-201ENST00000515300 253 ntBASIC5.22□□□□□ -1.57
TOPBP1Q92547 COX6CP8-201ENST00000522620 226 ntBASIC5.22□□□□□ -1.57
TOPBP1Q92547 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC5.22□□□□□ -1.57
TOPBP1Q92547 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
TOPBP1Q92547 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
TOPBP1Q92547 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC5.21□□□□□ -1.58
TOPBP1Q92547 RPL7P8-201ENST00000411964 730 ntBASIC5.21□□□□□ -1.58
TOPBP1Q92547 AL356968.1-201ENST00000416622 474 ntBASIC5.21□□□□□ -1.58
TOPBP1Q92547 GNG5P5-201ENST00000420444 220 ntBASIC5.21□□□□□ -1.58
TOPBP1Q92547 ACTG1P13-201ENST00000486987 1043 ntBASIC5.21□□□□□ -1.58
TOPBP1Q92547 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC5.21□□□□□ -1.58
TOPBP1Q92547 SCARNA20.6-201ENST00000517251 106 ntBASIC5.21□□□□□ -1.58
TOPBP1Q92547 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC5.21□□□□□ -1.58
TOPBP1Q92547 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
TOPBP1Q92547 AL121576.1-201ENST00000556055 276 ntBASIC5.21□□□□□ -1.58
TOPBP1Q92547 uc_338.1-201ENST00000612113 180 ntBASIC5.21□□□□□ -1.58
TOPBP1Q92547 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.21□□□□□ -1.58
TOPBP1Q92547 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
TOPBP1Q92547 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC5.21□□□□□ -1.58
TOPBP1Q92547 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
TOPBP1Q92547 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
TOPBP1Q92547 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC5.21□□□□□ -1.58
TOPBP1Q92547 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.2□□□□□ -1.58
TOPBP1Q92547 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
TOPBP1Q92547 RN7SL93P-201ENST00000463035 293 ntBASIC5.2□□□□□ -1.58
TOPBP1Q92547 AC021205.2-201ENST00000480069 347 ntBASIC5.2□□□□□ -1.58
TOPBP1Q92547 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
TOPBP1Q92547 AC079600.2-201ENST00000550076 130 ntBASIC5.2□□□□□ -1.58
TOPBP1Q92547 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC5.2□□□□□ -1.58
TOPBP1Q92547 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC5.2□□□□□ -1.58
TOPBP1Q92547 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TOPBP1Q92547 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TOPBP1Q92547 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
TOPBP1Q92547 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TOPBP1Q92547 AC015813.6-201ENST00000624409 5808 ntBASIC5.19□□□□□ -1.58
TOPBP1Q92547 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
TOPBP1Q92547 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
TOPBP1Q92547 NCAPGP1-201ENST00000505112 1814 ntBASIC5.19□□□□□ -1.58
TOPBP1Q92547 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
TOPBP1Q92547 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC5.19□□□□□ -1.58
TOPBP1Q92547 AC019097.1-201ENST00000424783 735 ntBASIC5.19□□□□□ -1.58
TOPBP1Q92547 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
TOPBP1Q92547 TXNP1-201ENST00000441872 371 ntBASIC5.19□□□□□ -1.58
TOPBP1Q92547 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC5.19□□□□□ -1.58
TOPBP1Q92547 AC128713.1-201ENST00000471495 306 ntBASIC5.19□□□□□ -1.58
TOPBP1Q92547 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC5.19□□□□□ -1.58
TOPBP1Q92547 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
TOPBP1Q92547 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC5.19□□□□□ -1.58
TOPBP1Q92547 uc_338.32-201ENST00000615087 172 ntBASIC5.19□□□□□ -1.58
TOPBP1Q92547 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
TOPBP1Q92547 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
TOPBP1Q92547 MIR22-201ENST00000362190 85 ntBASIC5.18□□□□□ -1.58
TOPBP1Q92547 HSPE1P16-201ENST00000426640 348 ntBASIC5.18□□□□□ -1.58
TOPBP1Q92547 AC022018.1-201ENST00000430685 241 ntBASIC5.18□□□□□ -1.58
TOPBP1Q92547 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC5.18□□□□□ -1.58
TOPBP1Q92547 RFPL4AP5-201ENST00000514977 504 ntBASIC5.18□□□□□ -1.58
TOPBP1Q92547 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC5.18□□□□□ -1.58
TOPBP1Q92547 AL360157.1-201ENST00000565962 87 ntBASIC5.18□□□□□ -1.58
TOPBP1Q92547 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC5.18□□□□□ -1.58
TOPBP1Q92547 AC007619.2-201ENST00000605743 379 ntBASIC5.18□□□□□ -1.58
TOPBP1Q92547 AC112503.1-201ENST00000608436 391 ntBASIC5.18□□□□□ -1.58
TOPBP1Q92547 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC5.18□□□□□ -1.58
TOPBP1Q92547 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC5.18□□□□□ -1.58
TOPBP1Q92547 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
TOPBP1Q92547 AL031595.2-201ENST00000624215 19071 ntBASIC5.18□□□□□ -1.58
TOPBP1Q92547 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC5.18□□□□□ -1.58
TOPBP1Q92547 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.18□□□□□ -1.58
TOPBP1Q92547 CR381670.1-201ENST00000624291 1693 ntBASIC5.18□□□□□ -1.58
TOPBP1Q92547 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
TOPBP1Q92547 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC5.18□□□□□ -1.58
TOPBP1Q92547 RFPL4AP3-201ENST00000515267 345 ntBASIC5.18□□□□□ -1.58
TOPBP1Q92547 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC5.18□□□□□ -1.58
TOPBP1Q92547 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC5.18□□□□□ -1.58
TOPBP1Q92547 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms