Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC4.11□□□□□ -1.75
RTL9Q8NET4 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC4.11□□□□□ -1.75
RTL9Q8NET4 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC4.11□□□□□ -1.75
RTL9Q8NET4 CR383656.14-201ENST00000551951 406 ntBASIC4.11□□□□□ -1.75
RTL9Q8NET4 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC4.11□□□□□ -1.75
RTL9Q8NET4 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC4.11□□□□□ -1.75
RTL9Q8NET4 AC110741.2-201ENST00000605278 268 ntBASIC4.11□□□□□ -1.75
RTL9Q8NET4 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC4.11□□□□□ -1.75
RTL9Q8NET4 AL162274.2-201ENST00000614406 332 ntBASIC4.11□□□□□ -1.75
RTL9Q8NET4 AL356321.1-201ENST00000621360 228 ntBASIC4.11□□□□□ -1.75
RTL9Q8NET4 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC4.11□□□□□ -1.75
RTL9Q8NET4 AC017071.1-201ENST00000564407 2204 ntBASIC4.11□□□□□ -1.75
RTL9Q8NET4 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
RTL9Q8NET4 CPD-202ENST00000543464 4007 ntTSL 2 BASIC4.11□□□□□ -1.75
RTL9Q8NET4 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
RTL9Q8NET4 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
RTL9Q8NET4 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC4.1□□□□□ -1.75
RTL9Q8NET4 BCLAF1P1-201ENST00000505813 2752 ntBASIC4.1□□□□□ -1.75
RTL9Q8NET4 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC4.1□□□□□ -1.75
RTL9Q8NET4 AMD1P2-201ENST00000412936 992 ntBASIC4.1□□□□□ -1.75
RTL9Q8NET4 AC093698.1-201ENST00000423843 571 ntBASIC4.1□□□□□ -1.75
RTL9Q8NET4 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC4.1□□□□□ -1.75
RTL9Q8NET4 AC239809.1-201ENST00000450470 217 ntBASIC4.1□□□□□ -1.75
RTL9Q8NET4 FCF1P3-201ENST00000496394 590 ntBASIC4.1□□□□□ -1.75
RTL9Q8NET4 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC4.1□□□□□ -1.75
RTL9Q8NET4 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC4.1□□□□□ -1.75
RTL9Q8NET4 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.1□□□□□ -1.75
RTL9Q8NET4 AC113192.3-201ENST00000529152 742 ntBASIC4.1□□□□□ -1.75
RTL9Q8NET4 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC4.1□□□□□ -1.75
RTL9Q8NET4 HIGD1AP1-201ENST00000550979 275 ntBASIC4.1□□□□□ -1.75
RTL9Q8NET4 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC4.1□□□□□ -1.75
RTL9Q8NET4 MIR4644-201ENST00000579929 84 ntBASIC4.1□□□□□ -1.75
RTL9Q8NET4 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC4.1□□□□□ -1.75
RTL9Q8NET4 AC138932.5-201ENST00000617759 563 ntBASIC4.1□□□□□ -1.75
RTL9Q8NET4 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4.1□□□□□ -1.75
RTL9Q8NET4 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC4.09□□□□□ -1.75
RTL9Q8NET4 MTND5P23-201ENST00000430812 1655 ntBASIC4.09□□□□□ -1.75
RTL9Q8NET4 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC4.09□□□□□ -1.75
RTL9Q8NET4 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
RTL9Q8NET4 SSR1P1-201ENST00000407630 814 ntBASIC4.09□□□□□ -1.75
RTL9Q8NET4 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC4.09□□□□□ -1.75
RTL9Q8NET4 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC4.09□□□□□ -1.75
RTL9Q8NET4 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC4.09□□□□□ -1.75
RTL9Q8NET4 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC4.09□□□□□ -1.75
RTL9Q8NET4 AC006028.1-201ENST00000438379 402 ntBASIC4.09□□□□□ -1.75
RTL9Q8NET4 RPS3AP43-201ENST00000479743 781 ntBASIC4.09□□□□□ -1.75
RTL9Q8NET4 AC021205.2-201ENST00000480069 347 ntBASIC4.09□□□□□ -1.75
RTL9Q8NET4 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
RTL9Q8NET4 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC4.09□□□□□ -1.75
RTL9Q8NET4 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC4.09□□□□□ -1.75
RTL9Q8NET4 MIR2114-201ENST00000516645 80 ntBASIC4.09□□□□□ -1.75
RTL9Q8NET4 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC4.09□□□□□ -1.75
RTL9Q8NET4 MIR4738-201ENST00000579134 87 ntBASIC4.09□□□□□ -1.75
RTL9Q8NET4 AC024023.1-201ENST00000624530 922 ntBASIC4.09□□□□□ -1.75
RTL9Q8NET4 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
RTL9Q8NET4 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC4.09□□□□□ -1.76
RTL9Q8NET4 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
RTL9Q8NET4 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
RTL9Q8NET4 RN7SKP44-201ENST00000363602 316 ntBASIC4.08□□□□□ -1.76
RTL9Q8NET4 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC4.08□□□□□ -1.76
RTL9Q8NET4 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
RTL9Q8NET4 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
RTL9Q8NET4 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.08□□□□□ -1.76
RTL9Q8NET4 RNU6-729P-201ENST00000384399 107 ntBASIC4.08□□□□□ -1.76
RTL9Q8NET4 NCSTNP1-201ENST00000406229 144 ntBASIC4.08□□□□□ -1.76
RTL9Q8NET4 HMGB3P18-201ENST00000406327 590 ntBASIC4.08□□□□□ -1.76
RTL9Q8NET4 AC009302.1-201ENST00000417147 390 ntBASIC4.08□□□□□ -1.76
RTL9Q8NET4 AC012065.2-201ENST00000421295 375 ntBASIC4.08□□□□□ -1.76
RTL9Q8NET4 RPL23AP82-202ENST00000427528 469 ntBASIC4.08□□□□□ -1.76
RTL9Q8NET4 CENPBD1P1-201ENST00000464061 469 ntBASIC4.08□□□□□ -1.76
RTL9Q8NET4 RPL23AP67-201ENST00000465341 474 ntBASIC4.08□□□□□ -1.76
RTL9Q8NET4 AC037198.2-201ENST00000478845 733 ntBASIC4.08□□□□□ -1.76
RTL9Q8NET4 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC4.08□□□□□ -1.76
RTL9Q8NET4 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC4.08□□□□□ -1.76
RTL9Q8NET4 AL121603.1-201ENST00000553815 142 ntBASIC4.08□□□□□ -1.76
RTL9Q8NET4 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC4.08□□□□□ -1.76
RTL9Q8NET4 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
RTL9Q8NET4 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
RTL9Q8NET4 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
RTL9Q8NET4 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
RTL9Q8NET4 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
RTL9Q8NET4 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC4.07□□□□□ -1.76
RTL9Q8NET4 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
RTL9Q8NET4 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
RTL9Q8NET4 AL136116.1-201ENST00000403591 381 ntBASIC4.07□□□□□ -1.76
RTL9Q8NET4 CCRL1P1-201ENST00000449542 1053 ntBASIC4.07□□□□□ -1.76
RTL9Q8NET4 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
RTL9Q8NET4 S100A11P1-201ENST00000477525 312 ntBASIC4.07□□□□□ -1.76
RTL9Q8NET4 AC097462.2-201ENST00000504623 481 ntBASIC4.07□□□□□ -1.76
RTL9Q8NET4 AC092851.1-201ENST00000535964 478 ntBASIC4.07□□□□□ -1.76
RTL9Q8NET4 AC004024.1-201ENST00000549244 247 ntBASIC4.07□□□□□ -1.76
RTL9Q8NET4 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC4.07□□□□□ -1.76
RTL9Q8NET4 CYP2C60P-201ENST00000566088 139 ntBASIC4.07□□□□□ -1.76
RTL9Q8NET4 AC141257.3-201ENST00000572906 215 ntBASIC4.07□□□□□ -1.76
RTL9Q8NET4 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC4.07□□□□□ -1.76
RTL9Q8NET4 RNVU1-4-201ENST00000612985 164 ntBASIC4.07□□□□□ -1.76
RTL9Q8NET4 AL157817.1-201ENST00000614264 790 ntBASIC4.07□□□□□ -1.76
RTL9Q8NET4 AC110801.1-201ENST00000623590 212 ntBASIC4.07□□□□□ -1.76
RTL9Q8NET4 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
RTL9Q8NET4 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms