Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 HMGN1P28-201ENST00000521340 364 ntBASIC6.18□□□□□ -1.42
DEPDC4Q8N2C3 IGLVV-66-201ENST00000523818 341 ntBASIC6.18□□□□□ -1.42
DEPDC4Q8N2C3 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
DEPDC4Q8N2C3 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC6.18□□□□□ -1.42
DEPDC4Q8N2C3 AL117187.1-201ENST00000555482 181 ntBASIC6.18□□□□□ -1.42
DEPDC4Q8N2C3 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC6.18□□□□□ -1.42
DEPDC4Q8N2C3 AC004817.2-201ENST00000561794 651 ntBASIC6.18□□□□□ -1.42
DEPDC4Q8N2C3 MIR5583-1-201ENST00000580941 59 ntBASIC6.18□□□□□ -1.42
DEPDC4Q8N2C3 AC069061.3-201ENST00000582254 823 ntBASIC6.18□□□□□ -1.42
DEPDC4Q8N2C3 AC098847.2-201ENST00000588088 528 ntTSL 5 BASIC6.18□□□□□ -1.42
DEPDC4Q8N2C3 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC6.18□□□□□ -1.42
DEPDC4Q8N2C3 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC6.18□□□□□ -1.42
DEPDC4Q8N2C3 RPS27AP19-201ENST00000597285 458 ntBASIC6.18□□□□□ -1.42
DEPDC4Q8N2C3 AC011500.1-201ENST00000601963 469 ntBASIC6.18□□□□□ -1.42
DEPDC4Q8N2C3 AL355812.1-201ENST00000603215 216 ntBASIC6.18□□□□□ -1.42
DEPDC4Q8N2C3 AC092747.3-201ENST00000603769 301 ntBASIC6.18□□□□□ -1.42
DEPDC4Q8N2C3 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC6.18□□□□□ -1.42
DEPDC4Q8N2C3 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC6.18□□□□□ -1.42
DEPDC4Q8N2C3 RFPL4AP6-201ENST00000616792 846 ntBASIC6.18□□□□□ -1.42
DEPDC4Q8N2C3 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
DEPDC4Q8N2C3 AL713922.2-201ENST00000619384 716 ntBASIC6.18□□□□□ -1.42
DEPDC4Q8N2C3 AP005212.3-201ENST00000619964 528 ntBASIC6.18□□□□□ -1.42
DEPDC4Q8N2C3 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC6.18□□□□□ -1.42
DEPDC4Q8N2C3 EDRF1-AS1-214ENST00000622798 526 ntTSL 5 BASIC6.18□□□□□ -1.42
DEPDC4Q8N2C3 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC6.18□□□□□ -1.42
DEPDC4Q8N2C3 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
DEPDC4Q8N2C3 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
DEPDC4Q8N2C3 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
DEPDC4Q8N2C3 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
DEPDC4Q8N2C3 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
DEPDC4Q8N2C3 PARP4P2-201ENST00000446672 3326 ntBASIC6.18□□□□□ -1.42
DEPDC4Q8N2C3 PAIP1-202ENST00000338972 1814 ntAPPRIS P3 TSL 5 BASIC6.18□□□□□ -1.42
DEPDC4Q8N2C3 CREM-217ENST00000439705 2306 ntTSL 5 BASIC6.17□□□□□ -1.42
DEPDC4Q8N2C3 FBXO7-202ENST00000397426 1888 ntTSL 2 BASIC6.17□□□□□ -1.42
DEPDC4Q8N2C3 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC6.17□□□□□ -1.42
DEPDC4Q8N2C3 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC6.17□□□□□ -1.42
DEPDC4Q8N2C3 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
DEPDC4Q8N2C3 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
DEPDC4Q8N2C3 MFSD8-239ENST00000641590 2479 ntBASIC6.17□□□□□ -1.42
DEPDC4Q8N2C3 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC6.17□□□□□ -1.42
DEPDC4Q8N2C3 PPIAP24-201ENST00000328558 471 ntBASIC6.17□□□□□ -1.42
DEPDC4Q8N2C3 RNA5SP514-201ENST00000363717 111 ntBASIC6.17□□□□□ -1.42
DEPDC4Q8N2C3 SNORD8-201ENST00000363915 110 ntBASIC6.17□□□□□ -1.42
DEPDC4Q8N2C3 RNU6-593P-201ENST00000364716 112 ntBASIC6.17□□□□□ -1.42
DEPDC4Q8N2C3 SNORA70.9-201ENST00000384370 135 ntBASIC6.17□□□□□ -1.42
DEPDC4Q8N2C3 SOD2P1-201ENST00000396543 562 ntBASIC6.17□□□□□ -1.42
DEPDC4Q8N2C3 AL109755.1-201ENST00000401791 649 ntBASIC6.17□□□□□ -1.42
DEPDC4Q8N2C3 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC6.17□□□□□ -1.42
DEPDC4Q8N2C3 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC6.17□□□□□ -1.42
DEPDC4Q8N2C3 SKA2P1-201ENST00000425592 390 ntBASIC6.17□□□□□ -1.42
DEPDC4Q8N2C3 AC092162.1-201ENST00000432828 434 ntBASIC6.17□□□□□ -1.42
DEPDC4Q8N2C3 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
DEPDC4Q8N2C3 CYCSP12-201ENST00000437729 300 ntBASIC6.17□□□□□ -1.42
DEPDC4Q8N2C3 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC6.17□□□□□ -1.42
DEPDC4Q8N2C3 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC6.17□□□□□ -1.42
DEPDC4Q8N2C3 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC6.17□□□□□ -1.42
DEPDC4Q8N2C3 AC009244.1-201ENST00000450566 258 ntBASIC6.17□□□□□ -1.42
DEPDC4Q8N2C3 RN7SL492P-201ENST00000460700 295 ntBASIC6.17□□□□□ -1.42
DEPDC4Q8N2C3 RN7SL836P-201ENST00000476140 296 ntBASIC6.17□□□□□ -1.42
DEPDC4Q8N2C3 RPL7P43-201ENST00000478876 753 ntBASIC6.17□□□□□ -1.42
DEPDC4Q8N2C3 AC104825.1-201ENST00000503186 685 ntTSL 3 BASIC6.17□□□□□ -1.42
DEPDC4Q8N2C3 SRP72-202ENST00000504757 745 ntTSL 2 BASIC6.17□□□□□ -1.42
DEPDC4Q8N2C3 AC006499.3-201ENST00000506077 748 ntBASIC6.17□□□□□ -1.42
DEPDC4Q8N2C3 AC083906.1-201ENST00000509298 406 ntBASIC6.17□□□□□ -1.42
DEPDC4Q8N2C3 PTP4A1P4-201ENST00000512479 322 ntBASIC6.17□□□□□ -1.42
DEPDC4Q8N2C3 RNU6-189P-201ENST00000516120 101 ntBASIC6.17□□□□□ -1.42
DEPDC4Q8N2C3 HMGB1P19-201ENST00000517578 577 ntBASIC6.17□□□□□ -1.42
DEPDC4Q8N2C3 IGLC4-201ENST00000517690 248 ntBASIC6.17□□□□□ -1.42
DEPDC4Q8N2C3 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC6.17□□□□□ -1.42
DEPDC4Q8N2C3 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC6.17□□□□□ -1.42
DEPDC4Q8N2C3 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC6.17□□□□□ -1.42
DEPDC4Q8N2C3 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC6.17□□□□□ -1.42
DEPDC4Q8N2C3 IGHV1-14-201ENST00000523391 241 ntBASIC6.17□□□□□ -1.42
DEPDC4Q8N2C3 AC107952.1-201ENST00000524200 376 ntBASIC6.17□□□□□ -1.42
DEPDC4Q8N2C3 AC130366.1-201ENST00000526505 1192 ntBASIC6.17□□□□□ -1.42
DEPDC4Q8N2C3 AC007537.1-201ENST00000539347 327 ntBASIC6.17□□□□□ -1.42
DEPDC4Q8N2C3 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC6.17□□□□□ -1.42
DEPDC4Q8N2C3 MIR3668-201ENST00000582138 75 ntBASIC6.17□□□□□ -1.42
DEPDC4Q8N2C3 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC6.17□□□□□ -1.42
DEPDC4Q8N2C3 AC092032.1-201ENST00000603090 165 ntBASIC6.17□□□□□ -1.42
DEPDC4Q8N2C3 AC007938.3-201ENST00000604965 623 ntBASIC6.17□□□□□ -1.42
DEPDC4Q8N2C3 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC6.17□□□□□ -1.42
DEPDC4Q8N2C3 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC6.17□□□□□ -1.42
DEPDC4Q8N2C3 Six3os1_2.1-201ENST00000616963 217 ntBASIC6.17□□□□□ -1.42
DEPDC4Q8N2C3 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC6.17□□□□□ -1.42
DEPDC4Q8N2C3 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
DEPDC4Q8N2C3 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC6.17□□□□□ -1.42
DEPDC4Q8N2C3 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
DEPDC4Q8N2C3 AL512353.3-201ENST00000417517 1326 ntBASIC6.17□□□□□ -1.42
DEPDC4Q8N2C3 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
DEPDC4Q8N2C3 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC6.17□□□□□ -1.42
DEPDC4Q8N2C3 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
DEPDC4Q8N2C3 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
DEPDC4Q8N2C3 AL137003.2-201ENST00000606924 2538 ntBASIC6.17□□□□□ -1.42
DEPDC4Q8N2C3 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
DEPDC4Q8N2C3 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC6.17□□□□□ -1.42
DEPDC4Q8N2C3 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
DEPDC4Q8N2C3 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
DEPDC4Q8N2C3 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
DEPDC4Q8N2C3 AC005332.5-201ENST00000591222 2919 ntBASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms