Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC6.85□□□□□ -1.31
SCUBE3Q8IX30 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
SCUBE3Q8IX30 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
SCUBE3Q8IX30 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
SCUBE3Q8IX30 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
SCUBE3Q8IX30 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
SCUBE3Q8IX30 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
SCUBE3Q8IX30 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
SCUBE3Q8IX30 SNORD35A-201ENST00000363389 86 ntBASIC6.85□□□□□ -1.31
SCUBE3Q8IX30 SNORD115-7-201ENST00000365306 82 ntBASIC6.85□□□□□ -1.31
SCUBE3Q8IX30 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC6.85□□□□□ -1.31
SCUBE3Q8IX30 RN7SKP86-201ENST00000410454 332 ntBASIC6.85□□□□□ -1.31
SCUBE3Q8IX30 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
SCUBE3Q8IX30 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC6.85□□□□□ -1.31
SCUBE3Q8IX30 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC6.85□□□□□ -1.31
SCUBE3Q8IX30 HIGD1AP11-201ENST00000438361 280 ntBASIC6.85□□□□□ -1.31
SCUBE3Q8IX30 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC6.85□□□□□ -1.31
SCUBE3Q8IX30 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC6.85□□□□□ -1.31
SCUBE3Q8IX30 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC6.85□□□□□ -1.31
SCUBE3Q8IX30 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC6.85□□□□□ -1.31
SCUBE3Q8IX30 AC011476.1-201ENST00000466725 307 ntBASIC6.85□□□□□ -1.31
SCUBE3Q8IX30 AC022206.1-201ENST00000495947 347 ntBASIC6.85□□□□□ -1.31
SCUBE3Q8IX30 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC6.85□□□□□ -1.31
SCUBE3Q8IX30 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
SCUBE3Q8IX30 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC6.85□□□□□ -1.31
SCUBE3Q8IX30 RPS27AP18-201ENST00000515536 459 ntBASIC6.85□□□□□ -1.31
SCUBE3Q8IX30 SCARNA16.2-201ENST00000516520 172 ntBASIC6.85□□□□□ -1.31
SCUBE3Q8IX30 IGKV2D-23-201ENST00000518179 286 ntBASIC6.85□□□□□ -1.31
SCUBE3Q8IX30 SOD1P3-201ENST00000518682 454 ntBASIC6.85□□□□□ -1.31
SCUBE3Q8IX30 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC6.85□□□□□ -1.31
SCUBE3Q8IX30 HSPE1P20-201ENST00000538133 289 ntBASIC6.85□□□□□ -1.31
SCUBE3Q8IX30 SETP7-201ENST00000552169 453 ntBASIC6.85□□□□□ -1.31
SCUBE3Q8IX30 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC6.85□□□□□ -1.31
SCUBE3Q8IX30 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC6.85□□□□□ -1.31
SCUBE3Q8IX30 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC6.85□□□□□ -1.31
SCUBE3Q8IX30 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC6.85□□□□□ -1.31
SCUBE3Q8IX30 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC6.85□□□□□ -1.31
SCUBE3Q8IX30 MRPL57P1-201ENST00000621486 265 ntBASIC6.85□□□□□ -1.31
SCUBE3Q8IX30 EPHA3-203ENST00000494014 3085 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
SCUBE3Q8IX30 AC097714.1-201ENST00000511272 1647 ntBASIC6.85□□□□□ -1.31
SCUBE3Q8IX30 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC6.85□□□□□ -1.31
SCUBE3Q8IX30 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC6.85□□□□□ -1.31
SCUBE3Q8IX30 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
SCUBE3Q8IX30 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
SCUBE3Q8IX30 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
SCUBE3Q8IX30 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
SCUBE3Q8IX30 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
SCUBE3Q8IX30 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
SCUBE3Q8IX30 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC6.85□□□□□ -1.31
SCUBE3Q8IX30 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC6.84□□□□□ -1.31
SCUBE3Q8IX30 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
SCUBE3Q8IX30 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
SCUBE3Q8IX30 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
SCUBE3Q8IX30 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
SCUBE3Q8IX30 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
SCUBE3Q8IX30 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
SCUBE3Q8IX30 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
SCUBE3Q8IX30 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC6.84□□□□□ -1.31
SCUBE3Q8IX30 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
SCUBE3Q8IX30 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
SCUBE3Q8IX30 Y_RNA.276-201ENST00000364732 109 ntBASIC6.84□□□□□ -1.31
SCUBE3Q8IX30 ADIG-201ENST00000373348 430 ntTSL 2 BASIC6.84□□□□□ -1.31
SCUBE3Q8IX30 MIR649-201ENST00000384843 97 ntBASIC6.84□□□□□ -1.31
SCUBE3Q8IX30 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC6.84□□□□□ -1.31
SCUBE3Q8IX30 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
SCUBE3Q8IX30 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
SCUBE3Q8IX30 AL645939.3-201ENST00000435408 225 ntBASIC6.84□□□□□ -1.31
SCUBE3Q8IX30 AC011816.1-201ENST00000441346 546 ntBASIC6.84□□□□□ -1.31
SCUBE3Q8IX30 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC6.84□□□□□ -1.31
SCUBE3Q8IX30 AL445687.2-201ENST00000458156 728 ntBASIC6.84□□□□□ -1.31
SCUBE3Q8IX30 AC092824.1-201ENST00000483524 576 ntBASIC6.84□□□□□ -1.31
SCUBE3Q8IX30 RNU6-307P-201ENST00000516743 106 ntBASIC6.84□□□□□ -1.31
SCUBE3Q8IX30 RN7SKP92-201ENST00000517266 244 ntBASIC6.84□□□□□ -1.31
SCUBE3Q8IX30 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC6.84□□□□□ -1.31
SCUBE3Q8IX30 AC112191.2-201ENST00000522428 333 ntBASIC6.84□□□□□ -1.31
SCUBE3Q8IX30 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC6.84□□□□□ -1.31
SCUBE3Q8IX30 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC6.84□□□□□ -1.31
SCUBE3Q8IX30 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC6.84□□□□□ -1.31
SCUBE3Q8IX30 AC097467.4-201ENST00000605504 141 ntBASIC6.84□□□□□ -1.31
SCUBE3Q8IX30 MIR6862-1-201ENST00000613016 70 ntBASIC6.84□□□□□ -1.31
SCUBE3Q8IX30 MIR6862-2-201ENST00000614755 70 ntBASIC6.84□□□□□ -1.31
SCUBE3Q8IX30 MIR6071-201ENST00000616741 78 ntBASIC6.84□□□□□ -1.31
SCUBE3Q8IX30 WWOX-217ENST00000620008 450 ntTSL 2 BASIC6.84□□□□□ -1.31
SCUBE3Q8IX30 AL445363.3-201ENST00000623080 671 ntBASIC6.84□□□□□ -1.31
SCUBE3Q8IX30 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC6.84□□□□□ -1.31
SCUBE3Q8IX30 AC073592.6-201ENST00000624271 415 ntBASIC6.84□□□□□ -1.31
SCUBE3Q8IX30 NEK5-201ENST00000355568 2918 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
SCUBE3Q8IX30 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
SCUBE3Q8IX30 CYP2G2P-201ENST00000594920 1485 ntBASIC6.84□□□□□ -1.31
SCUBE3Q8IX30 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC6.84□□□□□ -1.31
SCUBE3Q8IX30 LCOR-201ENST00000286067 4542 ntBASIC6.84□□□□□ -1.32
SCUBE3Q8IX30 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.32
SCUBE3Q8IX30 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
SCUBE3Q8IX30 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC6.84□□□□□ -1.32
SCUBE3Q8IX30 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC6.84□□□□□ -1.32
SCUBE3Q8IX30 DLD-204ENST00000437604 1859 ntTSL 2 BASIC6.83□□□□□ -1.32
SCUBE3Q8IX30 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC6.83□□□□□ -1.32
SCUBE3Q8IX30 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC6.83□□□□□ -1.32
SCUBE3Q8IX30 AC010624.4-201ENST00000597606 1351 ntBASIC6.83□□□□□ -1.32
SCUBE3Q8IX30 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms