Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 SNX5P1-201ENST00000505757 1041 ntBASIC4.81□□□□□ -1.64
VRK3Q8IV63 AC093824.1-201ENST00000508796 343 ntBASIC4.81□□□□□ -1.64
VRK3Q8IV63 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
VRK3Q8IV63 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC4.81□□□□□ -1.64
VRK3Q8IV63 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC4.81□□□□□ -1.64
VRK3Q8IV63 IGHV3-63-201ENST00000518422 341 ntBASIC4.81□□□□□ -1.64
VRK3Q8IV63 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC4.81□□□□□ -1.64
VRK3Q8IV63 AP002812.4-201ENST00000532139 286 ntBASIC4.81□□□□□ -1.64
VRK3Q8IV63 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
VRK3Q8IV63 AC008033.2-201ENST00000542626 177 ntBASIC4.81□□□□□ -1.64
VRK3Q8IV63 AC137768.1-201ENST00000549998 553 ntBASIC4.81□□□□□ -1.64
VRK3Q8IV63 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC4.81□□□□□ -1.64
VRK3Q8IV63 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC4.81□□□□□ -1.64
VRK3Q8IV63 TVP23CP2-201ENST00000571473 623 ntBASIC4.81□□□□□ -1.64
VRK3Q8IV63 AP001004.1-201ENST00000582468 324 ntBASIC4.81□□□□□ -1.64
VRK3Q8IV63 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.81□□□□□ -1.64
VRK3Q8IV63 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
VRK3Q8IV63 AC233280.2-201ENST00000603917 1070 ntBASIC4.81□□□□□ -1.64
VRK3Q8IV63 AC090578.1-201ENST00000604955 591 ntBASIC4.81□□□□□ -1.64
VRK3Q8IV63 AC005084.1-201ENST00000605160 304 ntBASIC4.81□□□□□ -1.64
VRK3Q8IV63 AC098614.4-201ENST00000607601 462 ntBASIC4.81□□□□□ -1.64
VRK3Q8IV63 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
VRK3Q8IV63 AC019206.1-201ENST00000621938 425 ntBASIC4.81□□□□□ -1.64
VRK3Q8IV63 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.81□□□□□ -1.64
VRK3Q8IV63 FER-210ENST00000628534 558 ntTSL 5 BASIC4.81□□□□□ -1.64
VRK3Q8IV63 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.81□□□□□ -1.64
VRK3Q8IV63 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
VRK3Q8IV63 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
VRK3Q8IV63 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.81□□□□□ -1.64
VRK3Q8IV63 AC100871.1-201ENST00000507871 1456 ntBASIC4.81□□□□□ -1.64
VRK3Q8IV63 AC116158.1-201ENST00000560231 2129 ntBASIC4.81□□□□□ -1.64
VRK3Q8IV63 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
VRK3Q8IV63 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
VRK3Q8IV63 AC099654.2-201ENST00000433031 1980 ntBASIC4.8□□□□□ -1.64
VRK3Q8IV63 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.8□□□□□ -1.64
VRK3Q8IV63 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
VRK3Q8IV63 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.8□□□□□ -1.64
VRK3Q8IV63 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
VRK3Q8IV63 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
VRK3Q8IV63 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
VRK3Q8IV63 RNU6-619P-201ENST00000365146 108 ntBASIC4.8□□□□□ -1.64
VRK3Q8IV63 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
VRK3Q8IV63 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
VRK3Q8IV63 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
VRK3Q8IV63 AL161909.1-201ENST00000397390 712 ntBASIC4.8□□□□□ -1.64
VRK3Q8IV63 RN7SKP285-201ENST00000410137 318 ntBASIC4.8□□□□□ -1.64
VRK3Q8IV63 RNA5SP345-201ENST00000410646 108 ntBASIC4.8□□□□□ -1.64
VRK3Q8IV63 RNU2-42P-201ENST00000410697 113 ntBASIC4.8□□□□□ -1.64
VRK3Q8IV63 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC4.8□□□□□ -1.64
VRK3Q8IV63 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.8□□□□□ -1.64
VRK3Q8IV63 AC092647.1-201ENST00000420654 287 ntBASIC4.8□□□□□ -1.64
VRK3Q8IV63 GAPDHP49-201ENST00000421421 961 ntBASIC4.8□□□□□ -1.64
VRK3Q8IV63 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC4.8□□□□□ -1.64
VRK3Q8IV63 AL450263.2-201ENST00000439400 589 ntBASIC4.8□□□□□ -1.64
VRK3Q8IV63 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC4.8□□□□□ -1.64
VRK3Q8IV63 AC112498.1-201ENST00000444401 332 ntBASIC4.8□□□□□ -1.64
VRK3Q8IV63 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC4.8□□□□□ -1.64
VRK3Q8IV63 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC4.8□□□□□ -1.64
VRK3Q8IV63 SNRPFP4-201ENST00000456366 242 ntBASIC4.8□□□□□ -1.64
VRK3Q8IV63 RPL32P9-201ENST00000487963 407 ntBASIC4.8□□□□□ -1.64
VRK3Q8IV63 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.8□□□□□ -1.64
VRK3Q8IV63 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
VRK3Q8IV63 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC4.8□□□□□ -1.64
VRK3Q8IV63 AC025465.4-201ENST00000513422 638 ntBASIC4.8□□□□□ -1.64
VRK3Q8IV63 AC010342.1-201ENST00000514047 877 ntBASIC4.8□□□□□ -1.64
VRK3Q8IV63 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.8□□□□□ -1.64
VRK3Q8IV63 RNU6-358P-201ENST00000516564 75 ntBASIC4.8□□□□□ -1.64
VRK3Q8IV63 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC4.8□□□□□ -1.64
VRK3Q8IV63 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC4.8□□□□□ -1.64
VRK3Q8IV63 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC4.8□□□□□ -1.64
VRK3Q8IV63 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC4.8□□□□□ -1.64
VRK3Q8IV63 OR1F2P-201ENST00000570470 933 ntBASIC4.8□□□□□ -1.64
VRK3Q8IV63 AC136618.2-201ENST00000575091 400 ntBASIC4.8□□□□□ -1.64
VRK3Q8IV63 UBE2V2P2-201ENST00000587677 504 ntBASIC4.8□□□□□ -1.64
VRK3Q8IV63 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC4.8□□□□□ -1.64
VRK3Q8IV63 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC4.8□□□□□ -1.64
VRK3Q8IV63 AL049634.3-201ENST00000604968 457 ntBASIC4.8□□□□□ -1.64
VRK3Q8IV63 OR8G7P-201ENST00000616658 848 ntBASIC4.8□□□□□ -1.64
VRK3Q8IV63 AL121890.2-201ENST00000617644 465 ntBASIC4.8□□□□□ -1.64
VRK3Q8IV63 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.8□□□□□ -1.64
VRK3Q8IV63 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC4.8□□□□□ -1.64
VRK3Q8IV63 AC087385.3-201ENST00000620477 187 ntBASIC4.8□□□□□ -1.64
VRK3Q8IV63 AL136221.1-201ENST00000621449 509 ntBASIC4.8□□□□□ -1.64
VRK3Q8IV63 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC4.8□□□□□ -1.64
VRK3Q8IV63 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC4.8□□□□□ -1.64
VRK3Q8IV63 AC133552.1-201ENST00000569988 4007 ntBASIC4.8□□□□□ -1.64
VRK3Q8IV63 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
VRK3Q8IV63 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC4.8□□□□□ -1.64
VRK3Q8IV63 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC4.8□□□□□ -1.64
VRK3Q8IV63 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
VRK3Q8IV63 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.8□□□□□ -1.64
VRK3Q8IV63 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.8□□□□□ -1.64
VRK3Q8IV63 GTF2H2B-203ENST00000508065 1432 ntBASIC4.8□□□□□ -1.64
VRK3Q8IV63 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
VRK3Q8IV63 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.8□□□□□ -1.64
VRK3Q8IV63 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
VRK3Q8IV63 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
VRK3Q8IV63 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
VRK3Q8IV63 AC008758.3-201ENST00000507003 1829 ntBASIC4.79□□□□□ -1.64
VRK3Q8IV63 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 142.1 ms