Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.33□□□□□ -1.56
ATG4DQ86TL0 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.33□□□□□ -1.56
ATG4DQ86TL0 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.33□□□□□ -1.56
ATG4DQ86TL0 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
ATG4DQ86TL0 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC5.33□□□□□ -1.56
ATG4DQ86TL0 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
ATG4DQ86TL0 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.33□□□□□ -1.56
ATG4DQ86TL0 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
ATG4DQ86TL0 AC109780.1-201ENST00000451768 1344 ntBASIC5.33□□□□□ -1.56
ATG4DQ86TL0 ASNSP3-201ENST00000451989 1306 ntBASIC5.33□□□□□ -1.56
ATG4DQ86TL0 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.33□□□□□ -1.56
ATG4DQ86TL0 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.33□□□□□ -1.56
ATG4DQ86TL0 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
ATG4DQ86TL0 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
ATG4DQ86TL0 Y_RNA.112-201ENST00000363250 102 ntBASIC5.33□□□□□ -1.56
ATG4DQ86TL0 Y_RNA.255-201ENST00000364581 97 ntBASIC5.33□□□□□ -1.56
ATG4DQ86TL0 Y_RNA.301-201ENST00000364990 103 ntBASIC5.33□□□□□ -1.56
ATG4DQ86TL0 MIR1-2-201ENST00000384961 85 ntBASIC5.33□□□□□ -1.56
ATG4DQ86TL0 RNA5SP105-201ENST00000391123 113 ntBASIC5.33□□□□□ -1.56
ATG4DQ86TL0 BTBD10P2-201ENST00000404779 676 ntBASIC5.33□□□□□ -1.56
ATG4DQ86TL0 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC5.33□□□□□ -1.56
ATG4DQ86TL0 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.33□□□□□ -1.56
ATG4DQ86TL0 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC5.33□□□□□ -1.56
ATG4DQ86TL0 HMGB3P10-201ENST00000434734 572 ntBASIC5.33□□□□□ -1.56
ATG4DQ86TL0 RSU1P2-202ENST00000437884 485 ntBASIC5.33□□□□□ -1.56
ATG4DQ86TL0 ATP6V1E1P1-201ENST00000439215 681 ntBASIC5.33□□□□□ -1.56
ATG4DQ86TL0 RPL7P15-201ENST00000461190 712 ntBASIC5.33□□□□□ -1.56
ATG4DQ86TL0 AC006539.1-201ENST00000481419 501 ntBASIC5.33□□□□□ -1.56
ATG4DQ86TL0 AC083904.1-201ENST00000487828 231 ntBASIC5.33□□□□□ -1.56
ATG4DQ86TL0 RPS4XP18-201ENST00000495480 763 ntBASIC5.33□□□□□ -1.56
ATG4DQ86TL0 MTCO1P29-201ENST00000496868 288 ntBASIC5.33□□□□□ -1.56
ATG4DQ86TL0 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC5.33□□□□□ -1.56
ATG4DQ86TL0 MRPS35P2-201ENST00000508242 191 ntBASIC5.33□□□□□ -1.56
ATG4DQ86TL0 TMEM248P1-201ENST00000510579 951 ntBASIC5.33□□□□□ -1.56
ATG4DQ86TL0 RNU6-406P-201ENST00000516470 107 ntBASIC5.33□□□□□ -1.56
ATG4DQ86TL0 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC5.33□□□□□ -1.56
ATG4DQ86TL0 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC5.33□□□□□ -1.56
ATG4DQ86TL0 AC126615.2-201ENST00000553003 515 ntBASIC5.33□□□□□ -1.56
ATG4DQ86TL0 POLR2KP1-201ENST00000553226 168 ntBASIC5.33□□□□□ -1.56
ATG4DQ86TL0 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.33□□□□□ -1.56
ATG4DQ86TL0 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC5.33□□□□□ -1.56
ATG4DQ86TL0 AP001521.1-201ENST00000609150 300 ntBASIC5.33□□□□□ -1.56
ATG4DQ86TL0 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
ATG4DQ86TL0 MIR6862-1-201ENST00000613016 70 ntBASIC5.33□□□□□ -1.56
ATG4DQ86TL0 AL138960.1-201ENST00000613838 513 ntBASIC5.33□□□□□ -1.56
ATG4DQ86TL0 AC083806.3-201ENST00000614016 455 ntBASIC5.33□□□□□ -1.56
ATG4DQ86TL0 MIR6862-2-201ENST00000614755 70 ntBASIC5.33□□□□□ -1.56
ATG4DQ86TL0 AL139099.4-201ENST00000614802 114 ntBASIC5.33□□□□□ -1.56
ATG4DQ86TL0 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC5.33□□□□□ -1.56
ATG4DQ86TL0 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.33□□□□□ -1.56
ATG4DQ86TL0 AC129915.3-201ENST00000634128 948 ntBASIC5.33□□□□□ -1.56
ATG4DQ86TL0 AC119674.1-212ENST00000641155 993 ntBASIC5.33□□□□□ -1.56
ATG4DQ86TL0 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
ATG4DQ86TL0 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.33□□□□□ -1.56
ATG4DQ86TL0 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
ATG4DQ86TL0 MTND5P27-201ENST00000428871 1720 ntBASIC5.33□□□□□ -1.56
ATG4DQ86TL0 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
ATG4DQ86TL0 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
ATG4DQ86TL0 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.33□□□□□ -1.56
ATG4DQ86TL0 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
ATG4DQ86TL0 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC5.33□□□□□ -1.56
ATG4DQ86TL0 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
ATG4DQ86TL0 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
ATG4DQ86TL0 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
ATG4DQ86TL0 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
ATG4DQ86TL0 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
ATG4DQ86TL0 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
ATG4DQ86TL0 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
ATG4DQ86TL0 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.32□□□□□ -1.56
ATG4DQ86TL0 AP004289.2-201ENST00000444413 1457 ntBASIC5.32□□□□□ -1.56
ATG4DQ86TL0 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC5.32□□□□□ -1.56
ATG4DQ86TL0 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
ATG4DQ86TL0 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC5.32□□□□□ -1.56
ATG4DQ86TL0 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
ATG4DQ86TL0 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
ATG4DQ86TL0 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
ATG4DQ86TL0 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
ATG4DQ86TL0 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
ATG4DQ86TL0 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
ATG4DQ86TL0 AL157777.2-201ENST00000258070 137 ntBASIC5.32□□□□□ -1.56
ATG4DQ86TL0 RN7SKP78-201ENST00000364711 318 ntBASIC5.32□□□□□ -1.56
ATG4DQ86TL0 Y_RNA.339-201ENST00000365325 102 ntBASIC5.32□□□□□ -1.56
ATG4DQ86TL0 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
ATG4DQ86TL0 RNU6-532P-201ENST00000384318 107 ntBASIC5.32□□□□□ -1.56
ATG4DQ86TL0 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
ATG4DQ86TL0 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC5.32□□□□□ -1.56
ATG4DQ86TL0 HMGN1P20-201ENST00000411849 300 ntBASIC5.32□□□□□ -1.56
ATG4DQ86TL0 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC5.32□□□□□ -1.56
ATG4DQ86TL0 AC127526.1-201ENST00000417526 366 ntBASIC5.32□□□□□ -1.56
ATG4DQ86TL0 AC008267.5-201ENST00000424928 265 ntBASIC5.32□□□□□ -1.56
ATG4DQ86TL0 CRIP1P1-201ENST00000427567 185 ntBASIC5.32□□□□□ -1.56
ATG4DQ86TL0 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC5.32□□□□□ -1.56
ATG4DQ86TL0 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC5.32□□□□□ -1.56
ATG4DQ86TL0 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.32□□□□□ -1.56
ATG4DQ86TL0 AC104058.1-201ENST00000448028 297 ntBASIC5.32□□□□□ -1.56
ATG4DQ86TL0 AC004129.2-201ENST00000457229 287 ntBASIC5.32□□□□□ -1.56
ATG4DQ86TL0 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.32□□□□□ -1.56
ATG4DQ86TL0 RPL7P22-201ENST00000466005 733 ntBASIC5.32□□□□□ -1.56
ATG4DQ86TL0 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC5.32□□□□□ -1.56
ATG4DQ86TL0 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms