Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 RN7SL371P-201ENST00000578099 267 ntBASIC2.2□□□□□ -2.06
CSMD3Q7Z407 uc_338.25-201ENST00000613756 156 ntBASIC2.2□□□□□ -2.06
CSMD3Q7Z407 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC2.2□□□□□ -2.06
CSMD3Q7Z407 IGHVIII-44-202ENST00000636235 289 ntBASIC2.2□□□□□ -2.06
CSMD3Q7Z407 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
CSMD3Q7Z407 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC2.2□□□□□ -2.06
CSMD3Q7Z407 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC2.2□□□□□ -2.06
CSMD3Q7Z407 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
CSMD3Q7Z407 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
CSMD3Q7Z407 AC021205.2-201ENST00000480069 347 ntBASIC2.2□□□□□ -2.06
CSMD3Q7Z407 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC2.2□□□□□ -2.06
CSMD3Q7Z407 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC2.2□□□□□ -2.06
CSMD3Q7Z407 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
CSMD3Q7Z407 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
CSMD3Q7Z407 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
CSMD3Q7Z407 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
CSMD3Q7Z407 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC2.19□□□□□ -2.06
CSMD3Q7Z407 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
CSMD3Q7Z407 AL603825.1-201ENST00000438481 80 ntBASIC2.19□□□□□ -2.06
CSMD3Q7Z407 AC034159.1-201ENST00000513885 583 ntBASIC2.19□□□□□ -2.06
CSMD3Q7Z407 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC2.19□□□□□ -2.06
CSMD3Q7Z407 AC006518.1-201ENST00000541449 943 ntBASIC2.19□□□□□ -2.06
CSMD3Q7Z407 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC2.19□□□□□ -2.06
CSMD3Q7Z407 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC2.19□□□□□ -2.06
CSMD3Q7Z407 SNORD39.4-201ENST00000620099 78 ntBASIC2.19□□□□□ -2.06
CSMD3Q7Z407 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC2.19□□□□□ -2.06
CSMD3Q7Z407 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
CSMD3Q7Z407 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC2.19□□□□□ -2.06
CSMD3Q7Z407 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
CSMD3Q7Z407 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
CSMD3Q7Z407 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
CSMD3Q7Z407 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
CSMD3Q7Z407 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
CSMD3Q7Z407 HDGFP1-201ENST00000405943 252 ntBASIC2.19□□□□□ -2.06
CSMD3Q7Z407 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC2.19□□□□□ -2.06
CSMD3Q7Z407 AC117434.1-201ENST00000419971 836 ntBASIC2.19□□□□□ -2.06
CSMD3Q7Z407 RNU6-991P-201ENST00000516168 107 ntBASIC2.19□□□□□ -2.06
CSMD3Q7Z407 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC2.19□□□□□ -2.06
CSMD3Q7Z407 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
CSMD3Q7Z407 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
CSMD3Q7Z407 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC2.19□□□□□ -2.06
CSMD3Q7Z407 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
CSMD3Q7Z407 AC027287.1-201ENST00000553115 1453 ntBASIC2.19□□□□□ -2.06
CSMD3Q7Z407 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
CSMD3Q7Z407 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
CSMD3Q7Z407 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC2.19□□□□□ -2.06
CSMD3Q7Z407 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC2.19□□□□□ -2.06
CSMD3Q7Z407 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC2.19□□□□□ -2.06
CSMD3Q7Z407 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
CSMD3Q7Z407 AL445529.1-201ENST00000398713 389 ntBASIC2.19□□□□□ -2.06
CSMD3Q7Z407 RN7SKP220-201ENST00000410611 288 ntBASIC2.19□□□□□ -2.06
CSMD3Q7Z407 AC004552.1-201ENST00000419089 348 ntBASIC2.19□□□□□ -2.06
CSMD3Q7Z407 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC2.19□□□□□ -2.06
CSMD3Q7Z407 RPL12P18-201ENST00000437175 325 ntBASIC2.19□□□□□ -2.06
CSMD3Q7Z407 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.19□□□□□ -2.06
CSMD3Q7Z407 NPM1P39-201ENST00000449818 867 ntBASIC2.19□□□□□ -2.06
CSMD3Q7Z407 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC2.19□□□□□ -2.06
CSMD3Q7Z407 RN7SL594P-201ENST00000470590 287 ntBASIC2.19□□□□□ -2.06
CSMD3Q7Z407 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC2.19□□□□□ -2.06
CSMD3Q7Z407 AL121766.1-201ENST00000547436 487 ntBASIC2.19□□□□□ -2.06
CSMD3Q7Z407 AC027176.1-201ENST00000560204 514 ntBASIC2.19□□□□□ -2.06
CSMD3Q7Z407 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC2.19□□□□□ -2.06
CSMD3Q7Z407 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC2.19□□□□□ -2.06
CSMD3Q7Z407 EIF1P6-201ENST00000600054 334 ntBASIC2.19□□□□□ -2.06
CSMD3Q7Z407 AL162713.1-201ENST00000604480 262 ntBASIC2.19□□□□□ -2.06
CSMD3Q7Z407 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC2.19□□□□□ -2.06
CSMD3Q7Z407 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC2.19□□□□□ -2.06
CSMD3Q7Z407 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.19□□□□□ -2.06
CSMD3Q7Z407 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
CSMD3Q7Z407 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
CSMD3Q7Z407 AL353678.1-201ENST00000422735 741 ntBASIC2.18□□□□□ -2.06
CSMD3Q7Z407 RPL23AP82-202ENST00000427528 469 ntBASIC2.18□□□□□ -2.06
CSMD3Q7Z407 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC2.18□□□□□ -2.06
CSMD3Q7Z407 AL035407.1-201ENST00000429211 571 ntBASIC2.18□□□□□ -2.06
CSMD3Q7Z407 CENPBD1P1-201ENST00000464061 469 ntBASIC2.18□□□□□ -2.06
CSMD3Q7Z407 NPM1P29-201ENST00000483112 803 ntBASIC2.18□□□□□ -2.06
CSMD3Q7Z407 APOOP4-201ENST00000513530 597 ntBASIC2.18□□□□□ -2.06
CSMD3Q7Z407 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
CSMD3Q7Z407 HSPA8P1-201ENST00000425843 1833 ntBASIC2.18□□□□□ -2.06
CSMD3Q7Z407 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
CSMD3Q7Z407 ZNF90P1-201ENST00000480493 1951 ntBASIC2.18□□□□□ -2.06
CSMD3Q7Z407 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC2.18□□□□□ -2.06
CSMD3Q7Z407 AC012065.2-201ENST00000421295 375 ntBASIC2.18□□□□□ -2.06
CSMD3Q7Z407 AL513174.1-201ENST00000423182 629 ntBASIC2.18□□□□□ -2.06
CSMD3Q7Z407 IFNNP1-201ENST00000429219 553 ntBASIC2.18□□□□□ -2.06
CSMD3Q7Z407 AC069540.1-201ENST00000446320 988 ntBASIC2.18□□□□□ -2.06
CSMD3Q7Z407 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC2.18□□□□□ -2.06
CSMD3Q7Z407 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC2.18□□□□□ -2.06
CSMD3Q7Z407 RN7SKP31-201ENST00000516354 278 ntBASIC2.18□□□□□ -2.06
CSMD3Q7Z407 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.18□□□□□ -2.06
CSMD3Q7Z407 AC087888.1-201ENST00000550884 1254 ntBASIC2.18□□□□□ -2.06
CSMD3Q7Z407 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.18□□□□□ -2.06
CSMD3Q7Z407 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC2.18□□□□□ -2.06
CSMD3Q7Z407 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.18□□□□□ -2.06
CSMD3Q7Z407 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
CSMD3Q7Z407 AC004014.2-201ENST00000623718 5122 ntBASIC2.18□□□□□ -2.06
CSMD3Q7Z407 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.18□□□□□ -2.06
CSMD3Q7Z407 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC2.18□□□□□ -2.06
CSMD3Q7Z407 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
CSMD3Q7Z407 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC2.18□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms