Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC6.37□□□□□ -1.39
FOXR1Q6PIV2 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
FOXR1Q6PIV2 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
FOXR1Q6PIV2 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC6.37□□□□□ -1.39
FOXR1Q6PIV2 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC6.37□□□□□ -1.39
FOXR1Q6PIV2 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC6.37□□□□□ -1.39
FOXR1Q6PIV2 MTND5P30-201ENST00000452896 1731 ntBASIC6.37□□□□□ -1.39
FOXR1Q6PIV2 AC114546.3-201ENST00000623582 1734 ntBASIC6.37□□□□□ -1.39
FOXR1Q6PIV2 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
FOXR1Q6PIV2 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
FOXR1Q6PIV2 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
FOXR1Q6PIV2 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
FOXR1Q6PIV2 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
FOXR1Q6PIV2 AP002512.4-202ENST00000641599 4530 ntBASIC6.37□□□□□ -1.39
FOXR1Q6PIV2 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC6.37□□□□□ -1.39
FOXR1Q6PIV2 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
FOXR1Q6PIV2 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
FOXR1Q6PIV2 RNA5SP435-201ENST00000364044 108 ntBASIC6.37□□□□□ -1.39
FOXR1Q6PIV2 RNU1-84P-201ENST00000365447 164 ntBASIC6.37□□□□□ -1.39
FOXR1Q6PIV2 Y_RNA.414-201ENST00000384011 101 ntBASIC6.37□□□□□ -1.39
FOXR1Q6PIV2 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC6.37□□□□□ -1.39
FOXR1Q6PIV2 AL663061.1-201ENST00000416625 580 ntBASIC6.37□□□□□ -1.39
FOXR1Q6PIV2 DPH3P2-201ENST00000422618 250 ntBASIC6.37□□□□□ -1.39
FOXR1Q6PIV2 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
FOXR1Q6PIV2 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC6.37□□□□□ -1.39
FOXR1Q6PIV2 AC104837.2-201ENST00000427236 424 ntBASIC6.37□□□□□ -1.39
FOXR1Q6PIV2 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC6.37□□□□□ -1.39
FOXR1Q6PIV2 AC006548.1-201ENST00000427470 102 ntBASIC6.37□□□□□ -1.39
FOXR1Q6PIV2 RPS3AP54-201ENST00000435535 734 ntBASIC6.37□□□□□ -1.39
FOXR1Q6PIV2 KRT8P51-201ENST00000438938 274 ntBASIC6.37□□□□□ -1.39
FOXR1Q6PIV2 GAPDHP33-201ENST00000443168 1013 ntBASIC6.37□□□□□ -1.39
FOXR1Q6PIV2 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC6.37□□□□□ -1.39
FOXR1Q6PIV2 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC6.37□□□□□ -1.39
FOXR1Q6PIV2 AL935212.3-201ENST00000450729 284 ntBASIC6.37□□□□□ -1.39
FOXR1Q6PIV2 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC6.37□□□□□ -1.39
FOXR1Q6PIV2 AC104308.1-201ENST00000454621 333 ntBASIC6.37□□□□□ -1.39
FOXR1Q6PIV2 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC6.37□□□□□ -1.39
FOXR1Q6PIV2 RPL37P3-201ENST00000456825 293 ntBASIC6.37□□□□□ -1.39
FOXR1Q6PIV2 AC128713.1-201ENST00000471495 306 ntBASIC6.37□□□□□ -1.39
FOXR1Q6PIV2 AC073610.1-201ENST00000489971 396 ntBASIC6.37□□□□□ -1.39
FOXR1Q6PIV2 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC6.37□□□□□ -1.39
FOXR1Q6PIV2 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC6.37□□□□□ -1.39
FOXR1Q6PIV2 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC6.37□□□□□ -1.39
FOXR1Q6PIV2 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC6.37□□□□□ -1.39
FOXR1Q6PIV2 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC6.37□□□□□ -1.39
FOXR1Q6PIV2 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC6.37□□□□□ -1.39
FOXR1Q6PIV2 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
FOXR1Q6PIV2 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC6.37□□□□□ -1.39
FOXR1Q6PIV2 APPL2-203ENST00000546731 684 ntTSL 2 BASIC6.37□□□□□ -1.39
FOXR1Q6PIV2 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC6.37□□□□□ -1.39
FOXR1Q6PIV2 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC6.37□□□□□ -1.39
FOXR1Q6PIV2 AC113195.1-201ENST00000579952 141 ntBASIC6.37□□□□□ -1.39
FOXR1Q6PIV2 RN7SL753P-201ENST00000581238 290 ntBASIC6.37□□□□□ -1.39
FOXR1Q6PIV2 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC6.37□□□□□ -1.39
FOXR1Q6PIV2 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC6.37□□□□□ -1.39
FOXR1Q6PIV2 AL138895.2-201ENST00000603019 178 ntBASIC6.37□□□□□ -1.39
FOXR1Q6PIV2 ATP1B3P1-201ENST00000605365 821 ntBASIC6.37□□□□□ -1.39
FOXR1Q6PIV2 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC6.37□□□□□ -1.39
FOXR1Q6PIV2 OR10AB1P-201ENST00000609613 938 ntBASIC6.37□□□□□ -1.39
FOXR1Q6PIV2 AL136097.3-201ENST00000611097 505 ntBASIC6.37□□□□□ -1.39
FOXR1Q6PIV2 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
FOXR1Q6PIV2 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC6.37□□□□□ -1.39
FOXR1Q6PIV2 OR52H1-202ENST00000641796 1061 ntBASIC6.37□□□□□ -1.39
FOXR1Q6PIV2 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC6.37□□□□□ -1.39
FOXR1Q6PIV2 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
FOXR1Q6PIV2 AC074141.1-201ENST00000588129 2995 ntBASIC6.37□□□□□ -1.39
FOXR1Q6PIV2 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
FOXR1Q6PIV2 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC6.37□□□□□ -1.39
FOXR1Q6PIV2 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
FOXR1Q6PIV2 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
FOXR1Q6PIV2 PNPT1P2-201ENST00000456768 2050 ntBASIC6.37□□□□□ -1.39
FOXR1Q6PIV2 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
FOXR1Q6PIV2 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
FOXR1Q6PIV2 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
FOXR1Q6PIV2 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
FOXR1Q6PIV2 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC6.36□□□□□ -1.39
FOXR1Q6PIV2 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC6.36□□□□□ -1.39
FOXR1Q6PIV2 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC6.36□□□□□ -1.39
FOXR1Q6PIV2 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC6.36□□□□□ -1.39
FOXR1Q6PIV2 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
FOXR1Q6PIV2 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
FOXR1Q6PIV2 VTRNA3-1P-201ENST00000362552 102 ntBASIC6.36□□□□□ -1.39
FOXR1Q6PIV2 RNU6-666P-201ENST00000363499 107 ntBASIC6.36□□□□□ -1.39
FOXR1Q6PIV2 RNU6-99P-201ENST00000364721 107 ntBASIC6.36□□□□□ -1.39
FOXR1Q6PIV2 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
FOXR1Q6PIV2 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
FOXR1Q6PIV2 RNU6-310P-201ENST00000384655 107 ntBASIC6.36□□□□□ -1.39
FOXR1Q6PIV2 Y_RNA.556-201ENST00000384677 113 ntBASIC6.36□□□□□ -1.39
FOXR1Q6PIV2 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
FOXR1Q6PIV2 SSXP10-201ENST00000402595 565 ntBASIC6.36□□□□□ -1.39
FOXR1Q6PIV2 SNORA77.2-201ENST00000408571 112 ntBASIC6.36□□□□□ -1.39
FOXR1Q6PIV2 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC6.36□□□□□ -1.39
FOXR1Q6PIV2 RNU6-193P-201ENST00000410977 107 ntBASIC6.36□□□□□ -1.39
FOXR1Q6PIV2 HSD17B7P1-201ENST00000412419 1017 ntBASIC6.36□□□□□ -1.39
FOXR1Q6PIV2 METTL15P3-201ENST00000415522 1221 ntBASIC6.36□□□□□ -1.39
FOXR1Q6PIV2 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
FOXR1Q6PIV2 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC6.36□□□□□ -1.39
FOXR1Q6PIV2 RPL7P4-203ENST00000430239 730 ntBASIC6.36□□□□□ -1.39
FOXR1Q6PIV2 RPL34P6-201ENST00000432390 345 ntBASIC6.36□□□□□ -1.39
FOXR1Q6PIV2 AC007679.3-201ENST00000434035 414 ntBASIC6.36□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms