Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 RAB14-201ENST00000373840 4145 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
VARS2Q5ST30 UG0898H09-202ENST00000623646 7040 ntBASIC7.26□□□□□ -1.25
VARS2Q5ST30 FDFT1-222ENST00000538689 2289 ntTSL 2 BASIC7.26□□□□□ -1.25
VARS2Q5ST30 CA10-204ENST00000570565 2276 ntTSL 5 BASIC7.26□□□□□ -1.25
VARS2Q5ST30 AL355306.2-202ENST00000634380 2281 ntTSL 5 BASIC7.26□□□□□ -1.25
VARS2Q5ST30 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
VARS2Q5ST30 RIF1-201ENST00000243326 15003 ntAPPRIS P3 TSL 1 (best) BASIC7.26□□□□□ -1.25
VARS2Q5ST30 USPL1-203ENST00000614860 4074 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
VARS2Q5ST30 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
VARS2Q5ST30 PRDM2-201ENST00000235372 7957 ntAPPRIS P4 TSL 1 (best) BASIC7.26□□□□□ -1.25
VARS2Q5ST30 NBPF12-203ENST00000611443 5594 ntTSL 5 BASIC7.26□□□□□ -1.25
VARS2Q5ST30 AC092111.1-201ENST00000618256 3358 ntBASIC7.26□□□□□ -1.25
VARS2Q5ST30 STON2-206ENST00000555447 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
VARS2Q5ST30 ADA2-201ENST00000262607 3925 ntAPPRIS P3 TSL 1 (best) BASIC7.26□□□□□ -1.25
VARS2Q5ST30 SNORD35A-201ENST00000363389 86 ntBASIC7.26□□□□□ -1.25
VARS2Q5ST30 RNU6-596P-201ENST00000365395 98 ntBASIC7.26□□□□□ -1.25
VARS2Q5ST30 RNU6-214P-201ENST00000384130 107 ntBASIC7.26□□□□□ -1.25
VARS2Q5ST30 Y_RNA.458-201ENST00000384240 102 ntBASIC7.26□□□□□ -1.25
VARS2Q5ST30 SNORA16.2-201ENST00000390991 127 ntBASIC7.26□□□□□ -1.25
VARS2Q5ST30 RNA5SP474-201ENST00000391234 90 ntBASIC7.26□□□□□ -1.25
VARS2Q5ST30 AL023284.3-201ENST00000407767 334 ntBASIC7.26□□□□□ -1.25
VARS2Q5ST30 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC7.26□□□□□ -1.25
VARS2Q5ST30 CYP4F30P-202ENST00000420048 405 ntBASIC7.26□□□□□ -1.25
VARS2Q5ST30 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
VARS2Q5ST30 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC7.26□□□□□ -1.25
VARS2Q5ST30 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC7.26□□□□□ -1.25
VARS2Q5ST30 AC128677.1-201ENST00000436016 442 ntBASIC7.26□□□□□ -1.25
VARS2Q5ST30 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC7.26□□□□□ -1.25
VARS2Q5ST30 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC7.26□□□□□ -1.25
VARS2Q5ST30 AC093166.3-201ENST00000448785 303 ntBASIC7.26□□□□□ -1.25
VARS2Q5ST30 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC7.26□□□□□ -1.25
VARS2Q5ST30 AC104339.1-201ENST00000465478 348 ntBASIC7.26□□□□□ -1.25
VARS2Q5ST30 RPS14P8-201ENST00000478778 369 ntBASIC7.26□□□□□ -1.25
VARS2Q5ST30 RPS10P20-201ENST00000494130 463 ntBASIC7.26□□□□□ -1.25
VARS2Q5ST30 RN7SL187P-201ENST00000495587 303 ntBASIC7.26□□□□□ -1.25
VARS2Q5ST30 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC7.26□□□□□ -1.25
VARS2Q5ST30 LEF1-218ENST00000512172 598 ntTSL 2 BASIC7.26□□□□□ -1.25
VARS2Q5ST30 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC7.26□□□□□ -1.25
VARS2Q5ST30 SNRPCP6-201ENST00000528310 210 ntBASIC7.26□□□□□ -1.25
VARS2Q5ST30 AC008083.2-201ENST00000546707 476 ntBASIC7.26□□□□□ -1.25
VARS2Q5ST30 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC7.26□□□□□ -1.25
VARS2Q5ST30 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC7.26□□□□□ -1.25
VARS2Q5ST30 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC7.26□□□□□ -1.25
VARS2Q5ST30 RPL29P33-201ENST00000587474 316 ntBASIC7.26□□□□□ -1.25
VARS2Q5ST30 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC7.26□□□□□ -1.25
VARS2Q5ST30 NANOGP3-201ENST00000605855 286 ntBASIC7.26□□□□□ -1.25
VARS2Q5ST30 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC7.26□□□□□ -1.25
VARS2Q5ST30 MIR1244-1-201ENST00000612829 85 ntBASIC7.26□□□□□ -1.25
VARS2Q5ST30 Y_RNA.802-201ENST00000614892 130 ntBASIC7.26□□□□□ -1.25
VARS2Q5ST30 AC068213.1-201ENST00000625124 226 ntBASIC7.26□□□□□ -1.25
VARS2Q5ST30 SNORA16A-202ENST00000628458 135 ntBASIC7.26□□□□□ -1.25
VARS2Q5ST30 MIR1244-3-201ENST00000635744 85 ntBASIC7.26□□□□□ -1.25
VARS2Q5ST30 MIR1244-2-201ENST00000636449 85 ntBASIC7.26□□□□□ -1.25
VARS2Q5ST30 MIR1244-4-202ENST00000636813 85 ntBASIC7.26□□□□□ -1.25
VARS2Q5ST30 CNTNAP4-206ENST00000478060 3708 ntTSL 5 BASIC7.26□□□□□ -1.25
VARS2Q5ST30 AC103710.2-202ENST00000641454 2853 ntBASIC7.26□□□□□ -1.25
VARS2Q5ST30 AC009120.2-204ENST00000621548 2032 ntBASIC7.26□□□□□ -1.25
VARS2Q5ST30 SLC4A4-204ENST00000425175 7596 ntTSL 5 BASIC7.26□□□□□ -1.25
VARS2Q5ST30 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC7.26□□□□□ -1.25
VARS2Q5ST30 AC011460.1-201ENST00000636268 1834 ntBASIC7.26□□□□□ -1.25
VARS2Q5ST30 ABLIM1-214ENST00000533213 7606 ntTSL 5 BASIC7.26□□□□□ -1.25
VARS2Q5ST30 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
VARS2Q5ST30 SLC2A14-201ENST00000340749 3699 ntAPPRIS ALT2 TSL 2 BASIC7.26□□□□□ -1.25
VARS2Q5ST30 KIAA1958-203ENST00000536272 7650 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
VARS2Q5ST30 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
VARS2Q5ST30 NBPF26-206ENST00000617913 2931 ntTSL 5 BASIC7.26□□□□□ -1.25
VARS2Q5ST30 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
VARS2Q5ST30 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC7.26□□□□□ -1.25
VARS2Q5ST30 LINC02555-201ENST00000563933 1951 ntBASIC7.26□□□□□ -1.25
VARS2Q5ST30 LINC00598-215ENST00000638084 1974 ntTSL 5 BASIC7.26□□□□□ -1.25
VARS2Q5ST30 MEF2C-254ENST00000637732 3347 ntTSL 5 BASIC7.26□□□□□ -1.25
VARS2Q5ST30 ARL6-204ENST00000463745 4231 ntAPPRIS P1 TSL 2 BASIC7.25□□□□□ -1.25
VARS2Q5ST30 HSPD1P8-201ENST00000400121 1658 ntBASIC7.25□□□□□ -1.25
VARS2Q5ST30 ATAD1-202ENST00000328142 2939 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
VARS2Q5ST30 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC7.25□□□□□ -1.25
VARS2Q5ST30 QTRT2-212ENST00000485050 3844 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
VARS2Q5ST30 BLOC1S2-206ENST00000618916 2470 ntTSL 5 BASIC7.25□□□□□ -1.25
VARS2Q5ST30 AP000560.1-201ENST00000624150 1937 ntBASIC7.25□□□□□ -1.25
VARS2Q5ST30 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
VARS2Q5ST30 SLC12A6-201ENST00000290209 7286 ntAPPRIS P3 TSL 1 (best) BASIC7.25□□□□□ -1.25
VARS2Q5ST30 TPRG1-204ENST00000433971 2296 ntAPPRIS P1 TSL 2 BASIC7.25□□□□□ -1.25
VARS2Q5ST30 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
VARS2Q5ST30 IL5RA-204ENST00000418488 5521 ntTSL 5 BASIC7.25□□□□□ -1.25
VARS2Q5ST30 STAG3L4-201ENST00000352103 530 ntBASIC7.25□□□□□ -1.25
VARS2Q5ST30 RNA5SP232-201ENST00000364144 119 ntBASIC7.25□□□□□ -1.25
VARS2Q5ST30 Y_RNA.272-201ENST00000364696 102 ntBASIC7.25□□□□□ -1.25
VARS2Q5ST30 RNU6-708P-201ENST00000384217 107 ntBASIC7.25□□□□□ -1.25
VARS2Q5ST30 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
VARS2Q5ST30 SNORD70.1-201ENST00000391007 85 ntBASIC7.25□□□□□ -1.25
VARS2Q5ST30 RNA5SP178-201ENST00000410380 128 ntBASIC7.25□□□□□ -1.25
VARS2Q5ST30 RPL30P2-201ENST00000414021 291 ntBASIC7.25□□□□□ -1.25
VARS2Q5ST30 AC114491.1-201ENST00000416095 246 ntBASIC7.25□□□□□ -1.25
VARS2Q5ST30 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC7.25□□□□□ -1.25
VARS2Q5ST30 TBCAP1-201ENST00000436520 327 ntBASIC7.25□□□□□ -1.25
VARS2Q5ST30 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC7.25□□□□□ -1.25
VARS2Q5ST30 PFN1P11-201ENST00000445829 389 ntBASIC7.25□□□□□ -1.25
VARS2Q5ST30 TPT1P13-201ENST00000449760 499 ntBASIC7.25□□□□□ -1.25
VARS2Q5ST30 SETP20-201ENST00000457046 852 ntBASIC7.25□□□□□ -1.25
VARS2Q5ST30 RNU7-187P-201ENST00000458985 68 ntBASIC7.25□□□□□ -1.25
VARS2Q5ST30 AC020893.1-201ENST00000502452 580 ntBASIC7.25□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms