Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.78□□□□□ -1.64
CCDC38Q502W7 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CCDC38Q502W7 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CCDC38Q502W7 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CCDC38Q502W7 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CCDC38Q502W7 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC4.78□□□□□ -1.64
CCDC38Q502W7 NCLP2-201ENST00000416078 1462 ntBASIC4.78□□□□□ -1.64
CCDC38Q502W7 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
CCDC38Q502W7 RNA5SP52-201ENST00000362448 134 ntBASIC4.78□□□□□ -1.64
CCDC38Q502W7 RNU1-130P-201ENST00000363930 160 ntBASIC4.78□□□□□ -1.64
CCDC38Q502W7 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CCDC38Q502W7 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CCDC38Q502W7 RN7SKP167-201ENST00000411047 285 ntBASIC4.78□□□□□ -1.64
CCDC38Q502W7 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC4.78□□□□□ -1.64
CCDC38Q502W7 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC4.78□□□□□ -1.64
CCDC38Q502W7 RPL31P45-201ENST00000419532 356 ntBASIC4.78□□□□□ -1.64
CCDC38Q502W7 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.78□□□□□ -1.64
CCDC38Q502W7 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC4.78□□□□□ -1.64
CCDC38Q502W7 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC4.78□□□□□ -1.64
CCDC38Q502W7 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.78□□□□□ -1.64
CCDC38Q502W7 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC4.78□□□□□ -1.64
CCDC38Q502W7 AC008072.1-201ENST00000434254 824 ntBASIC4.78□□□□□ -1.64
CCDC38Q502W7 AC092427.1-201ENST00000439177 601 ntBASIC4.78□□□□□ -1.64
CCDC38Q502W7 VN1R10P-201ENST00000447106 875 ntBASIC4.78□□□□□ -1.64
CCDC38Q502W7 MTND1P31-201ENST00000449206 961 ntBASIC4.78□□□□□ -1.64
CCDC38Q502W7 AL451050.1-201ENST00000450126 415 ntBASIC4.78□□□□□ -1.64
CCDC38Q502W7 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC4.78□□□□□ -1.64
CCDC38Q502W7 ANK3-207ENST00000460468 677 ntTSL 3 BASIC4.78□□□□□ -1.64
CCDC38Q502W7 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC4.78□□□□□ -1.64
CCDC38Q502W7 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.78□□□□□ -1.64
CCDC38Q502W7 AC025164.1-201ENST00000496249 478 ntBASIC4.78□□□□□ -1.64
CCDC38Q502W7 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC4.78□□□□□ -1.64
CCDC38Q502W7 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC4.78□□□□□ -1.64
CCDC38Q502W7 RNU1-6P-201ENST00000516290 144 ntBASIC4.78□□□□□ -1.64
CCDC38Q502W7 AC105185.1-201ENST00000518705 535 ntBASIC4.78□□□□□ -1.64
CCDC38Q502W7 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.78□□□□□ -1.64
CCDC38Q502W7 AP001636.2-201ENST00000525517 696 ntBASIC4.78□□□□□ -1.64
CCDC38Q502W7 OR8L1P-201ENST00000534005 955 ntBASIC4.78□□□□□ -1.64
CCDC38Q502W7 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC4.78□□□□□ -1.64
CCDC38Q502W7 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC4.78□□□□□ -1.64
CCDC38Q502W7 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC4.78□□□□□ -1.64
CCDC38Q502W7 OR4G1P-201ENST00000588632 938 ntBASIC4.78□□□□□ -1.64
CCDC38Q502W7 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC4.78□□□□□ -1.64
CCDC38Q502W7 AC011487.3-201ENST00000593607 453 ntBASIC4.78□□□□□ -1.64
CCDC38Q502W7 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.78□□□□□ -1.64
CCDC38Q502W7 AL009028.1-201ENST00000604895 802 ntBASIC4.78□□□□□ -1.64
CCDC38Q502W7 AL513477.2-201ENST00000607858 568 ntBASIC4.78□□□□□ -1.64
CCDC38Q502W7 AC078899.5-201ENST00000612475 178 ntBASIC4.78□□□□□ -1.64
CCDC38Q502W7 AC092650.2-201ENST00000619984 902 ntBASIC4.78□□□□□ -1.64
CCDC38Q502W7 AC068870.2-201ENST00000620635 389 ntBASIC4.78□□□□□ -1.64
CCDC38Q502W7 MIR4727-201ENST00000622232 55 ntBASIC4.78□□□□□ -1.64
CCDC38Q502W7 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CCDC38Q502W7 OR6C71P-202ENST00000641886 1107 ntBASIC4.78□□□□□ -1.64
CCDC38Q502W7 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
CCDC38Q502W7 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CCDC38Q502W7 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.78□□□□□ -1.64
CCDC38Q502W7 AC104454.1-201ENST00000421341 1401 ntBASIC4.78□□□□□ -1.64
CCDC38Q502W7 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
CCDC38Q502W7 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.77□□□□□ -1.65
CCDC38Q502W7 AC131971.1-201ENST00000332881 1482 ntBASIC4.77□□□□□ -1.65
CCDC38Q502W7 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CCDC38Q502W7 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
CCDC38Q502W7 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC4.77□□□□□ -1.65
CCDC38Q502W7 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.77□□□□□ -1.65
CCDC38Q502W7 AF228730.1-201ENST00000397972 663 ntBASIC4.77□□□□□ -1.65
CCDC38Q502W7 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC4.77□□□□□ -1.65
CCDC38Q502W7 HSPD1P16-201ENST00000402302 394 ntBASIC4.77□□□□□ -1.65
CCDC38Q502W7 AL024474.1-201ENST00000404655 591 ntBASIC4.77□□□□□ -1.65
CCDC38Q502W7 AL603766.1-201ENST00000407763 664 ntBASIC4.77□□□□□ -1.65
CCDC38Q502W7 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC4.77□□□□□ -1.65
CCDC38Q502W7 AC004074.1-201ENST00000421810 1063 ntBASIC4.77□□□□□ -1.65
CCDC38Q502W7 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.77□□□□□ -1.65
CCDC38Q502W7 AL008629.1-201ENST00000438615 184 ntBASIC4.77□□□□□ -1.65
CCDC38Q502W7 RPL29P29-201ENST00000448725 423 ntBASIC4.77□□□□□ -1.65
CCDC38Q502W7 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.77□□□□□ -1.65
CCDC38Q502W7 AC079168.2-201ENST00000453977 416 ntBASIC4.77□□□□□ -1.65
CCDC38Q502W7 RPL18AP17-201ENST00000455326 198 ntBASIC4.77□□□□□ -1.65
CCDC38Q502W7 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC4.77□□□□□ -1.65
CCDC38Q502W7 AC105233.1-201ENST00000498840 781 ntBASIC4.77□□□□□ -1.65
CCDC38Q502W7 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.77□□□□□ -1.65
CCDC38Q502W7 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC4.77□□□□□ -1.65
CCDC38Q502W7 HIGD1AP3-201ENST00000515857 278 ntBASIC4.77□□□□□ -1.65
CCDC38Q502W7 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.77□□□□□ -1.65
CCDC38Q502W7 IGLV3-26-201ENST00000520756 302 ntBASIC4.77□□□□□ -1.65
CCDC38Q502W7 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC4.77□□□□□ -1.65
CCDC38Q502W7 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.77□□□□□ -1.65
CCDC38Q502W7 OR5AK1P-201ENST00000524837 922 ntBASIC4.77□□□□□ -1.65
CCDC38Q502W7 MTATP6P15-201ENST00000527233 835 ntBASIC4.77□□□□□ -1.65
CCDC38Q502W7 UBTFL10-201ENST00000528532 562 ntBASIC4.77□□□□□ -1.65
CCDC38Q502W7 AP003461.1-201ENST00000528866 78 ntBASIC4.77□□□□□ -1.65
CCDC38Q502W7 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
CCDC38Q502W7 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.77□□□□□ -1.65
CCDC38Q502W7 ZNF321P-202ENST00000550843 495 ntBASIC4.77□□□□□ -1.65
CCDC38Q502W7 DUXAP6-201ENST00000553858 601 ntBASIC4.77□□□□□ -1.65
CCDC38Q502W7 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.77□□□□□ -1.65
CCDC38Q502W7 AC005412.1-201ENST00000580812 1049 ntBASIC4.77□□□□□ -1.65
CCDC38Q502W7 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC4.77□□□□□ -1.65
CCDC38Q502W7 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC4.77□□□□□ -1.65
CCDC38Q502W7 LLPHP1-201ENST00000603571 367 ntBASIC4.77□□□□□ -1.65
CCDC38Q502W7 AC133644.2-201ENST00000608142 540 ntBASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms