Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
PCDH1Q08174 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC5.78□□□□□ -1.48
PCDH1Q08174 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC5.78□□□□□ -1.48
PCDH1Q08174 MIR6806-201ENST00000622141 64 ntBASIC5.78□□□□□ -1.48
PCDH1Q08174 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PCDH1Q08174 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PCDH1Q08174 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC5.78□□□□□ -1.48
PCDH1Q08174 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
PCDH1Q08174 AC093671.1-201ENST00000624981 2929 ntBASIC5.78□□□□□ -1.48
PCDH1Q08174 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
PCDH1Q08174 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.77□□□□□ -1.48
PCDH1Q08174 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC5.77□□□□□ -1.48
PCDH1Q08174 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.77□□□□□ -1.48
PCDH1Q08174 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
PCDH1Q08174 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC5.77□□□□□ -1.49
PCDH1Q08174 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
PCDH1Q08174 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
PCDH1Q08174 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.77□□□□□ -1.49
PCDH1Q08174 XPOTP1-201ENST00000443317 2398 ntBASIC5.77□□□□□ -1.49
PCDH1Q08174 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.77□□□□□ -1.49
PCDH1Q08174 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
PCDH1Q08174 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
PCDH1Q08174 Y_RNA.100-201ENST00000363141 102 ntBASIC5.77□□□□□ -1.49
PCDH1Q08174 RNA5SP232-201ENST00000364144 119 ntBASIC5.77□□□□□ -1.49
PCDH1Q08174 RNU4-48P-201ENST00000365559 182 ntBASIC5.77□□□□□ -1.49
PCDH1Q08174 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
PCDH1Q08174 RPL5P18-201ENST00000406671 891 ntBASIC5.77□□□□□ -1.49
PCDH1Q08174 RNU6-193P-201ENST00000410977 107 ntBASIC5.77□□□□□ -1.49
PCDH1Q08174 GSTM3P2-201ENST00000412746 530 ntBASIC5.77□□□□□ -1.49
PCDH1Q08174 DPPA2P2-201ENST00000418220 897 ntBASIC5.77□□□□□ -1.49
PCDH1Q08174 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC5.77□□□□□ -1.49
PCDH1Q08174 AC092832.1-201ENST00000422934 400 ntBASIC5.77□□□□□ -1.49
PCDH1Q08174 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC5.77□□□□□ -1.49
PCDH1Q08174 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
PCDH1Q08174 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC5.77□□□□□ -1.49
PCDH1Q08174 LYPLA1P1-201ENST00000434514 622 ntBASIC5.77□□□□□ -1.49
PCDH1Q08174 AL138799.3-201ENST00000438968 350 ntBASIC5.77□□□□□ -1.49
PCDH1Q08174 AC114495.1-201ENST00000441274 436 ntBASIC5.77□□□□□ -1.49
PCDH1Q08174 AC012512.1-201ENST00000446594 718 ntBASIC5.77□□□□□ -1.49
PCDH1Q08174 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC5.77□□□□□ -1.49
PCDH1Q08174 AC104164.1-201ENST00000460282 590 ntBASIC5.77□□□□□ -1.49
PCDH1Q08174 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC5.77□□□□□ -1.49
PCDH1Q08174 AC018797.1-201ENST00000510791 255 ntBASIC5.77□□□□□ -1.49
PCDH1Q08174 AC021146.1-201ENST00000511202 716 ntBASIC5.77□□□□□ -1.49
PCDH1Q08174 TTC39CP1-201ENST00000512513 755 ntBASIC5.77□□□□□ -1.49
PCDH1Q08174 PRMT5P1-201ENST00000514351 598 ntBASIC5.77□□□□□ -1.49
PCDH1Q08174 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC5.77□□□□□ -1.49
PCDH1Q08174 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC5.77□□□□□ -1.49
PCDH1Q08174 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC5.77□□□□□ -1.49
PCDH1Q08174 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC5.77□□□□□ -1.49
PCDH1Q08174 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC5.77□□□□□ -1.49
PCDH1Q08174 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC5.77□□□□□ -1.49
PCDH1Q08174 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
PCDH1Q08174 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC5.77□□□□□ -1.49
PCDH1Q08174 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.77□□□□□ -1.49
PCDH1Q08174 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC5.77□□□□□ -1.49
PCDH1Q08174 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC5.77□□□□□ -1.49
PCDH1Q08174 AC136443.5-201ENST00000603741 370 ntBASIC5.77□□□□□ -1.49
PCDH1Q08174 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC5.77□□□□□ -1.49
PCDH1Q08174 AC009597.2-201ENST00000604659 592 ntBASIC5.77□□□□□ -1.49
PCDH1Q08174 RNU6-89P-201ENST00000606519 100 ntBASIC5.77□□□□□ -1.49
PCDH1Q08174 AL022345.1-201ENST00000607292 135 ntBASIC5.77□□□□□ -1.49
PCDH1Q08174 AP001521.2-201ENST00000608772 546 ntBASIC5.77□□□□□ -1.49
PCDH1Q08174 FAM27E2-201ENST00000619668 403 ntBASIC5.77□□□□□ -1.49
PCDH1Q08174 AL591926.1-201ENST00000620542 217 ntBASIC5.77□□□□□ -1.49
PCDH1Q08174 AC079597.1-201ENST00000624306 508 ntBASIC5.77□□□□□ -1.49
PCDH1Q08174 AP001052.1-201ENST00000626421 99 ntBASIC5.77□□□□□ -1.49
PCDH1Q08174 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC5.77□□□□□ -1.49
PCDH1Q08174 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC5.77□□□□□ -1.49
PCDH1Q08174 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC5.77□□□□□ -1.49
PCDH1Q08174 CYP3A51P-201ENST00000633513 256 ntBASIC5.77□□□□□ -1.49
PCDH1Q08174 UOX-205ENST00000640983 544 ntTSL 4 BASIC5.77□□□□□ -1.49
PCDH1Q08174 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
PCDH1Q08174 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
PCDH1Q08174 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
PCDH1Q08174 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.77□□□□□ -1.49
PCDH1Q08174 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
PCDH1Q08174 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
PCDH1Q08174 AC097714.1-201ENST00000511272 1647 ntBASIC5.77□□□□□ -1.49
PCDH1Q08174 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
PCDH1Q08174 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.77□□□□□ -1.49
PCDH1Q08174 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
PCDH1Q08174 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.76□□□□□ -1.49
PCDH1Q08174 AC004656.1-201ENST00000568479 4951 ntBASIC5.76□□□□□ -1.49
PCDH1Q08174 HSPA8P14-201ENST00000552265 1805 ntBASIC5.76□□□□□ -1.49
PCDH1Q08174 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.76□□□□□ -1.49
PCDH1Q08174 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
PCDH1Q08174 AC022164.1-201ENST00000568767 2673 ntBASIC5.76□□□□□ -1.49
PCDH1Q08174 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
PCDH1Q08174 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
PCDH1Q08174 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.76□□□□□ -1.49
PCDH1Q08174 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC5.76□□□□□ -1.49
PCDH1Q08174 OR10R3P-201ENST00000361688 942 ntBASIC5.76□□□□□ -1.49
PCDH1Q08174 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
PCDH1Q08174 MIR514A2-201ENST00000385131 88 ntBASIC5.76□□□□□ -1.49
PCDH1Q08174 MIR514A3-201ENST00000385132 88 ntBASIC5.76□□□□□ -1.49
PCDH1Q08174 RPA3-204ENST00000406109 434 ntTSL 3 BASIC5.76□□□□□ -1.49
PCDH1Q08174 RNU4-26P-201ENST00000410270 107 ntBASIC5.76□□□□□ -1.49
PCDH1Q08174 RNU2-62P-201ENST00000410868 191 ntBASIC5.76□□□□□ -1.49
PCDH1Q08174 RN7SKP279-201ENST00000411383 298 ntBASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms