Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 AC231759.1-201ENST00000616455 597 ntBASIC3.91□□□□□ -1.78
SCN1BQ07699 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC3.91□□□□□ -1.78
SCN1BQ07699 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC3.91□□□□□ -1.78
SCN1BQ07699 AC007546.2-201ENST00000623996 360 ntBASIC3.91□□□□□ -1.78
SCN1BQ07699 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.91□□□□□ -1.78
SCN1BQ07699 CCT5-215ENST00000625723 135 ntTSL 5 BASIC3.91□□□□□ -1.78
SCN1BQ07699 MIR4278-201ENST00000636094 69 ntBASIC3.91□□□□□ -1.78
SCN1BQ07699 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
SCN1BQ07699 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SCN1BQ07699 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
SCN1BQ07699 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
SCN1BQ07699 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
SCN1BQ07699 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SCN1BQ07699 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SCN1BQ07699 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SCN1BQ07699 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SCN1BQ07699 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.91□□□□□ -1.78
SCN1BQ07699 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.78
SCN1BQ07699 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.9□□□□□ -1.78
SCN1BQ07699 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.9□□□□□ -1.78
SCN1BQ07699 MAPK10-373ENST00000641983 6772 ntBASIC3.9□□□□□ -1.78
SCN1BQ07699 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC3.9□□□□□ -1.78
SCN1BQ07699 FAM35DP-201ENST00000323387 2712 ntBASIC3.9□□□□□ -1.78
SCN1BQ07699 AC135352.1-201ENST00000506173 1418 ntBASIC3.9□□□□□ -1.78
SCN1BQ07699 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.9□□□□□ -1.79
SCN1BQ07699 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
SCN1BQ07699 RNU4-51P-201ENST00000364206 140 ntBASIC3.9□□□□□ -1.79
SCN1BQ07699 snoZ40.1-201ENST00000364540 72 ntBASIC3.9□□□□□ -1.79
SCN1BQ07699 SNORA71.2-201ENST00000364941 134 ntBASIC3.9□□□□□ -1.79
SCN1BQ07699 AC016769.3-201ENST00000396562 315 ntBASIC3.9□□□□□ -1.79
SCN1BQ07699 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.9□□□□□ -1.79
SCN1BQ07699 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.9□□□□□ -1.79
SCN1BQ07699 RPS12P10-201ENST00000427031 377 ntBASIC3.9□□□□□ -1.79
SCN1BQ07699 CNOT7P1-201ENST00000429006 852 ntBASIC3.9□□□□□ -1.79
SCN1BQ07699 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC3.9□□□□□ -1.79
SCN1BQ07699 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC3.9□□□□□ -1.79
SCN1BQ07699 ISCUP1-201ENST00000454451 448 ntBASIC3.9□□□□□ -1.79
SCN1BQ07699 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC3.9□□□□□ -1.79
SCN1BQ07699 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.9□□□□□ -1.79
SCN1BQ07699 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC3.9□□□□□ -1.79
SCN1BQ07699 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC3.9□□□□□ -1.79
SCN1BQ07699 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.9□□□□□ -1.79
SCN1BQ07699 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.9□□□□□ -1.79
SCN1BQ07699 RN7SKP244-201ENST00000516513 307 ntBASIC3.9□□□□□ -1.79
SCN1BQ07699 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC3.9□□□□□ -1.79
SCN1BQ07699 AC021451.1-201ENST00000523498 1129 ntBASIC3.9□□□□□ -1.79
SCN1BQ07699 OR4A12P-201ENST00000530847 918 ntBASIC3.9□□□□□ -1.79
SCN1BQ07699 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
SCN1BQ07699 ZKSCAN7P1-201ENST00000543668 673 ntBASIC3.9□□□□□ -1.79
SCN1BQ07699 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC3.9□□□□□ -1.79
SCN1BQ07699 AC009117.1-201ENST00000563948 554 ntBASIC3.9□□□□□ -1.79
SCN1BQ07699 BGLT3-201ENST00000564523 994 ntBASIC3.9□□□□□ -1.79
SCN1BQ07699 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.9□□□□□ -1.79
SCN1BQ07699 AL355812.1-201ENST00000603215 216 ntBASIC3.9□□□□□ -1.79
SCN1BQ07699 AP001521.1-201ENST00000609150 300 ntBASIC3.9□□□□□ -1.79
SCN1BQ07699 AL133445.2-201ENST00000611191 527 ntBASIC3.9□□□□□ -1.79
SCN1BQ07699 AC040168.1-201ENST00000623594 991 ntBASIC3.9□□□□□ -1.79
SCN1BQ07699 AC112200.1-201ENST00000625015 234 ntBASIC3.9□□□□□ -1.79
SCN1BQ07699 MTND2P41-201ENST00000637599 773 ntBASIC3.9□□□□□ -1.79
SCN1BQ07699 AL445984.1-201ENST00000637834 659 ntBASIC3.9□□□□□ -1.79
SCN1BQ07699 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.9□□□□□ -1.79
SCN1BQ07699 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC3.9□□□□□ -1.79
SCN1BQ07699 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
SCN1BQ07699 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
SCN1BQ07699 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.9□□□□□ -1.79
SCN1BQ07699 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
SCN1BQ07699 OFD1P5Y-201ENST00000447585 2590 ntBASIC3.9□□□□□ -1.79
SCN1BQ07699 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC3.9□□□□□ -1.79
SCN1BQ07699 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.9□□□□□ -1.79
SCN1BQ07699 GABPAP-201ENST00000419271 1356 ntBASIC3.89□□□□□ -1.79
SCN1BQ07699 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
SCN1BQ07699 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SCN1BQ07699 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC3.89□□□□□ -1.79
SCN1BQ07699 AC006971.1-201ENST00000407916 4486 ntBASIC3.89□□□□□ -1.79
SCN1BQ07699 USP8P1-201ENST00000494673 3183 ntBASIC3.89□□□□□ -1.79
SCN1BQ07699 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SCN1BQ07699 RNA5SP258-201ENST00000362750 119 ntBASIC3.89□□□□□ -1.79
SCN1BQ07699 RN7SKP149-201ENST00000363008 344 ntBASIC3.89□□□□□ -1.79
SCN1BQ07699 RNA5SP322-201ENST00000363617 119 ntBASIC3.89□□□□□ -1.79
SCN1BQ07699 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
SCN1BQ07699 RNU1-89P-201ENST00000384592 164 ntBASIC3.89□□□□□ -1.79
SCN1BQ07699 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
SCN1BQ07699 RNU6-821P-201ENST00000390995 107 ntBASIC3.89□□□□□ -1.79
SCN1BQ07699 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC3.89□□□□□ -1.79
SCN1BQ07699 RSU1P3-201ENST00000412878 835 ntBASIC3.89□□□□□ -1.79
SCN1BQ07699 AMD1P2-201ENST00000412936 992 ntBASIC3.89□□□□□ -1.79
SCN1BQ07699 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC3.89□□□□□ -1.79
SCN1BQ07699 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC3.89□□□□□ -1.79
SCN1BQ07699 AC140479.3-201ENST00000418944 1126 ntBASIC3.89□□□□□ -1.79
SCN1BQ07699 AC007435.1-201ENST00000421086 415 ntBASIC3.89□□□□□ -1.79
SCN1BQ07699 AC004074.1-201ENST00000421810 1063 ntBASIC3.89□□□□□ -1.79
SCN1BQ07699 HSFY1P1-201ENST00000423928 1178 ntBASIC3.89□□□□□ -1.79
SCN1BQ07699 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC3.89□□□□□ -1.79
SCN1BQ07699 AC006548.1-201ENST00000427470 102 ntBASIC3.89□□□□□ -1.79
SCN1BQ07699 MOB1AP1-201ENST00000430903 535 ntBASIC3.89□□□□□ -1.79
SCN1BQ07699 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC3.89□□□□□ -1.79
SCN1BQ07699 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC3.89□□□□□ -1.79
SCN1BQ07699 AC016831.4-201ENST00000438302 307 ntBASIC3.89□□□□□ -1.79
SCN1BQ07699 PTMAP6-201ENST00000439110 327 ntBASIC3.89□□□□□ -1.79
SCN1BQ07699 ELOCP13-201ENST00000443934 329 ntBASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms