Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC3.18□□□□□ -1.9
LSM6P62312 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC3.18□□□□□ -1.9
LSM6P62312 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.18□□□□□ -1.9
LSM6P62312 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
LSM6P62312 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.18□□□□□ -1.9
LSM6P62312 PHBP14-201ENST00000512887 367 ntBASIC3.18□□□□□ -1.9
LSM6P62312 AC093755.1-201ENST00000512950 1023 ntBASIC3.18□□□□□ -1.9
LSM6P62312 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.18□□□□□ -1.9
LSM6P62312 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.18□□□□□ -1.9
LSM6P62312 AC093331.1-201ENST00000521474 169 ntBASIC3.18□□□□□ -1.9
LSM6P62312 IGHV3-76-201ENST00000522465 295 ntBASIC3.18□□□□□ -1.9
LSM6P62312 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.18□□□□□ -1.9
LSM6P62312 OR8L1P-201ENST00000534005 955 ntBASIC3.18□□□□□ -1.9
LSM6P62312 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC3.18□□□□□ -1.9
LSM6P62312 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.18□□□□□ -1.9
LSM6P62312 AC023161.2-201ENST00000551218 780 ntBASIC3.18□□□□□ -1.9
LSM6P62312 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.18□□□□□ -1.9
LSM6P62312 CSNK1A1P1-202ENST00000563423 981 ntBASIC3.18□□□□□ -1.9
LSM6P62312 MIR4738-201ENST00000579134 87 ntBASIC3.18□□□□□ -1.9
LSM6P62312 AC119501.1-201ENST00000603646 475 ntBASIC3.18□□□□□ -1.9
LSM6P62312 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.18□□□□□ -1.9
LSM6P62312 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC3.18□□□□□ -1.9
LSM6P62312 AC069209.1-201ENST00000619282 651 ntBASIC3.18□□□□□ -1.9
LSM6P62312 AP003355.3-201ENST00000623465 114 ntBASIC3.18□□□□□ -1.9
LSM6P62312 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.18□□□□□ -1.9
LSM6P62312 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
LSM6P62312 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.18□□□□□ -1.9
LSM6P62312 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
LSM6P62312 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
LSM6P62312 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.18□□□□□ -1.9
LSM6P62312 AC021755.1-201ENST00000559747 1447 ntBASIC3.18□□□□□ -1.9
LSM6P62312 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.17□□□□□ -1.9
LSM6P62312 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
LSM6P62312 AC007256.1-201ENST00000392253 2765 ntBASIC3.17□□□□□ -1.9
LSM6P62312 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC3.17□□□□□ -1.9
LSM6P62312 RPL7P60-201ENST00000397636 735 ntBASIC3.17□□□□□ -1.9
LSM6P62312 CASKP1-201ENST00000412870 582 ntBASIC3.17□□□□□ -1.9
LSM6P62312 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.17□□□□□ -1.9
LSM6P62312 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC3.17□□□□□ -1.9
LSM6P62312 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
LSM6P62312 AC007064.3-201ENST00000422608 359 ntBASIC3.17□□□□□ -1.9
LSM6P62312 NEK4P1-201ENST00000433383 879 ntBASIC3.17□□□□□ -1.9
LSM6P62312 HMGB1P45-201ENST00000435986 653 ntBASIC3.17□□□□□ -1.9
LSM6P62312 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.17□□□□□ -1.9
LSM6P62312 RPS29P31-201ENST00000446147 164 ntBASIC3.17□□□□□ -1.9
LSM6P62312 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.17□□□□□ -1.9
LSM6P62312 SLC31A1P1-201ENST00000451221 567 ntBASIC3.17□□□□□ -1.9
LSM6P62312 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC3.17□□□□□ -1.9
LSM6P62312 PTGES3P5-201ENST00000455109 434 ntBASIC3.17□□□□□ -1.9
LSM6P62312 RPL21P104-201ENST00000464143 478 ntBASIC3.17□□□□□ -1.9
LSM6P62312 RPL23AP44-201ENST00000482216 473 ntBASIC3.17□□□□□ -1.9
LSM6P62312 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
LSM6P62312 OR5AP1P-201ENST00000529730 940 ntBASIC3.17□□□□□ -1.9
LSM6P62312 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
LSM6P62312 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
LSM6P62312 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC3.17□□□□□ -1.9
LSM6P62312 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.17□□□□□ -1.9
LSM6P62312 CYP2C60P-201ENST00000566088 139 ntBASIC3.17□□□□□ -1.9
LSM6P62312 MTND4LP24-201ENST00000572277 291 ntBASIC3.17□□□□□ -1.9
LSM6P62312 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.17□□□□□ -1.9
LSM6P62312 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.17□□□□□ -1.9
LSM6P62312 PCNAP1-202ENST00000595299 752 ntBASIC3.17□□□□□ -1.9
LSM6P62312 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.17□□□□□ -1.9
LSM6P62312 VN1R85P-201ENST00000601587 426 ntBASIC3.17□□□□□ -1.9
LSM6P62312 AC011468.4-201ENST00000603942 409 ntBASIC3.17□□□□□ -1.9
LSM6P62312 AC090525.3-201ENST00000605601 189 ntBASIC3.17□□□□□ -1.9
LSM6P62312 AC005021.1-201ENST00000608730 355 ntBASIC3.17□□□□□ -1.9
LSM6P62312 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.17□□□□□ -1.9
LSM6P62312 MIR4496-201ENST00000635896 61 ntBASIC3.17□□□□□ -1.9
LSM6P62312 AC009950.2-201ENST00000636548 183 ntBASIC3.17□□□□□ -1.9
LSM6P62312 AC087565.3-202ENST00000642085 1603 ntBASIC3.17□□□□□ -1.9
LSM6P62312 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
LSM6P62312 MTCO1P8-201ENST00000416914 1523 ntBASIC3.17□□□□□ -1.9
LSM6P62312 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
LSM6P62312 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
LSM6P62312 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
LSM6P62312 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
LSM6P62312 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
LSM6P62312 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
LSM6P62312 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
LSM6P62312 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
LSM6P62312 SNORA7.2-201ENST00000364446 145 ntBASIC3.16□□□□□ -1.9
LSM6P62312 SNORA51.2-201ENST00000364595 132 ntBASIC3.16□□□□□ -1.9
LSM6P62312 RNA5SP235-201ENST00000365411 114 ntBASIC3.16□□□□□ -1.9
LSM6P62312 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
LSM6P62312 HNRNPDP2-201ENST00000406475 478 ntBASIC3.16□□□□□ -1.9
LSM6P62312 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.16□□□□□ -1.9
LSM6P62312 RPL31P12-201ENST00000422587 358 ntBASIC3.16□□□□□ -1.9
LSM6P62312 AC074367.1-201ENST00000438685 1125 ntBASIC3.16□□□□□ -1.9
LSM6P62312 MED6P1-201ENST00000439659 713 ntBASIC3.16□□□□□ -1.9
LSM6P62312 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.16□□□□□ -1.9
LSM6P62312 ARL5AP2-201ENST00000444698 533 ntBASIC3.16□□□□□ -1.9
LSM6P62312 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC3.16□□□□□ -1.9
LSM6P62312 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
LSM6P62312 TRBV8-2-201ENST00000475637 270 ntBASIC3.16□□□□□ -1.9
LSM6P62312 HMGN1P11-201ENST00000508668 303 ntBASIC3.16□□□□□ -1.9
LSM6P62312 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.16□□□□□ -1.9
LSM6P62312 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.16□□□□□ -1.9
LSM6P62312 AC092593.2-201ENST00000513866 913 ntBASIC3.16□□□□□ -1.9
LSM6P62312 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms