Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC3.09□□□□□ -1.91
CLDN12P56749 AL590399.6-201ENST00000446396 307 ntBASIC3.09□□□□□ -1.91
CLDN12P56749 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.09□□□□□ -1.91
CLDN12P56749 RPL6P9-201ENST00000466502 859 ntBASIC3.09□□□□□ -1.91
CLDN12P56749 AP002884.2-201ENST00000471647 395 ntBASIC3.09□□□□□ -1.91
CLDN12P56749 RPS29P22-201ENST00000472363 168 ntBASIC3.09□□□□□ -1.91
CLDN12P56749 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CLDN12P56749 RN7SL323P-201ENST00000494712 295 ntBASIC3.09□□□□□ -1.91
CLDN12P56749 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.09□□□□□ -1.91
CLDN12P56749 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.09□□□□□ -1.91
CLDN12P56749 SNORA70.17-201ENST00000516449 133 ntBASIC3.09□□□□□ -1.91
CLDN12P56749 MIR2276-201ENST00000516886 89 ntBASIC3.09□□□□□ -1.91
CLDN12P56749 RN7SKP277-201ENST00000516895 283 ntBASIC3.09□□□□□ -1.91
CLDN12P56749 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.09□□□□□ -1.91
CLDN12P56749 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.09□□□□□ -1.91
CLDN12P56749 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.09□□□□□ -1.91
CLDN12P56749 AC026333.2-201ENST00000542164 106 ntBASIC3.09□□□□□ -1.91
CLDN12P56749 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.09□□□□□ -1.91
CLDN12P56749 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC3.09□□□□□ -1.91
CLDN12P56749 AL845331.3-202ENST00000562856 261 ntBASIC3.09□□□□□ -1.91
CLDN12P56749 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.09□□□□□ -1.91
CLDN12P56749 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.09□□□□□ -1.91
CLDN12P56749 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC3.09□□□□□ -1.91
CLDN12P56749 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.09□□□□□ -1.91
CLDN12P56749 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC3.09□□□□□ -1.91
CLDN12P56749 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.09□□□□□ -1.91
CLDN12P56749 AC006023.2-201ENST00000609916 167 ntBASIC3.09□□□□□ -1.91
CLDN12P56749 BX323046.1-201ENST00000610145 535 ntBASIC3.09□□□□□ -1.91
CLDN12P56749 AC099778.2-201ENST00000610904 211 ntBASIC3.09□□□□□ -1.91
CLDN12P56749 FP236240.3-201ENST00000623061 327 ntBASIC3.09□□□□□ -1.91
CLDN12P56749 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.09□□□□□ -1.91
CLDN12P56749 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC3.09□□□□□ -1.91
CLDN12P56749 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC3.09□□□□□ -1.91
CLDN12P56749 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.09□□□□□ -1.91
CLDN12P56749 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.92
CLDN12P56749 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.09□□□□□ -1.92
CLDN12P56749 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.09□□□□□ -1.92
CLDN12P56749 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CLDN12P56749 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
CLDN12P56749 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
CLDN12P56749 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CLDN12P56749 AL513302.2-201ENST00000562313 1842 ntBASIC3.08□□□□□ -1.92
CLDN12P56749 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CLDN12P56749 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CLDN12P56749 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
CLDN12P56749 RNU6-213P-201ENST00000384051 104 ntBASIC3.08□□□□□ -1.92
CLDN12P56749 AL022722.2-201ENST00000402519 180 ntBASIC3.08□□□□□ -1.92
CLDN12P56749 U3.39-201ENST00000408569 239 ntBASIC3.08□□□□□ -1.92
CLDN12P56749 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CLDN12P56749 AC016769.2-201ENST00000414815 475 ntBASIC3.08□□□□□ -1.92
CLDN12P56749 AC017079.2-201ENST00000416102 485 ntBASIC3.08□□□□□ -1.92
CLDN12P56749 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.08□□□□□ -1.92
CLDN12P56749 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CLDN12P56749 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC3.08□□□□□ -1.92
CLDN12P56749 SDCBPP2-201ENST00000424643 885 ntBASIC3.08□□□□□ -1.92
CLDN12P56749 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.08□□□□□ -1.92
CLDN12P56749 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC3.08□□□□□ -1.92
CLDN12P56749 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC3.08□□□□□ -1.92
CLDN12P56749 CKS1BP5-201ENST00000434172 273 ntBASIC3.08□□□□□ -1.92
CLDN12P56749 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC3.08□□□□□ -1.92
CLDN12P56749 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CLDN12P56749 RPL21P104-201ENST00000464143 478 ntBASIC3.08□□□□□ -1.92
CLDN12P56749 RN7SL442P-201ENST00000473804 320 ntBASIC3.08□□□□□ -1.92
CLDN12P56749 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.08□□□□□ -1.92
CLDN12P56749 RPS4XP13-201ENST00000483219 789 ntBASIC3.08□□□□□ -1.92
CLDN12P56749 AP000563.1-201ENST00000490865 758 ntBASIC3.08□□□□□ -1.92
CLDN12P56749 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC3.08□□□□□ -1.92
CLDN12P56749 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC3.08□□□□□ -1.92
CLDN12P56749 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC3.08□□□□□ -1.92
CLDN12P56749 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.08□□□□□ -1.92
CLDN12P56749 FTH1P21-201ENST00000512179 511 ntBASIC3.08□□□□□ -1.92
CLDN12P56749 RNU2-27P-201ENST00000516185 142 ntBASIC3.08□□□□□ -1.92
CLDN12P56749 AC008562.1-201ENST00000521763 330 ntBASIC3.08□□□□□ -1.92
CLDN12P56749 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.08□□□□□ -1.92
CLDN12P56749 DUXAP6-201ENST00000553858 601 ntBASIC3.08□□□□□ -1.92
CLDN12P56749 AC025884.1-201ENST00000556034 378 ntBASIC3.08□□□□□ -1.92
CLDN12P56749 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.08□□□□□ -1.92
CLDN12P56749 AC010735.1-201ENST00000567305 1026 ntBASIC3.08□□□□□ -1.92
CLDN12P56749 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC3.08□□□□□ -1.92
CLDN12P56749 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.08□□□□□ -1.92
CLDN12P56749 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC3.08□□□□□ -1.92
CLDN12P56749 AC008507.1-201ENST00000587506 734 ntBASIC3.08□□□□□ -1.92
CLDN12P56749 AC009303.3-201ENST00000591103 736 ntBASIC3.08□□□□□ -1.92
CLDN12P56749 AL591034.3-201ENST00000605511 685 ntBASIC3.08□□□□□ -1.92
CLDN12P56749 AL137246.1-201ENST00000607072 977 ntBASIC3.08□□□□□ -1.92
CLDN12P56749 AP004607.9-201ENST00000618202 316 ntBASIC3.08□□□□□ -1.92
CLDN12P56749 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC3.08□□□□□ -1.92
CLDN12P56749 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.08□□□□□ -1.92
CLDN12P56749 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CLDN12P56749 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CLDN12P56749 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CLDN12P56749 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
CLDN12P56749 TANK-205ENST00000405852 2155 ntTSL 5 BASIC3.08□□□□□ -1.92
CLDN12P56749 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CLDN12P56749 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CLDN12P56749 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
CLDN12P56749 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.07□□□□□ -1.92
CLDN12P56749 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CLDN12P56749 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
CLDN12P56749 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 177.3 ms