Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 Z80107.1-201ENST00000436830 412 ntBASIC4.12□□□□□ -1.75
CDH13P55290 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.12□□□□□ -1.75
CDH13P55290 VN1R25P-201ENST00000443385 738 ntBASIC4.12□□□□□ -1.75
CDH13P55290 PHBP16-201ENST00000446318 950 ntBASIC4.12□□□□□ -1.75
CDH13P55290 EIF2S2P2-201ENST00000447161 982 ntBASIC4.12□□□□□ -1.75
CDH13P55290 BX276092.4-201ENST00000452056 248 ntBASIC4.12□□□□□ -1.75
CDH13P55290 RPL23AP81-201ENST00000455252 467 ntBASIC4.12□□□□□ -1.75
CDH13P55290 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC4.12□□□□□ -1.75
CDH13P55290 AC006517.1-201ENST00000480485 328 ntBASIC4.12□□□□□ -1.75
CDH13P55290 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.12□□□□□ -1.75
CDH13P55290 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.12□□□□□ -1.75
CDH13P55290 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.12□□□□□ -1.75
CDH13P55290 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC4.12□□□□□ -1.75
CDH13P55290 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.12□□□□□ -1.75
CDH13P55290 AC111000.3-201ENST00000508057 576 ntBASIC4.12□□□□□ -1.75
CDH13P55290 AC010460.2-201ENST00000509054 677 ntBASIC4.12□□□□□ -1.75
CDH13P55290 MTCYBP16-201ENST00000509187 1129 ntBASIC4.12□□□□□ -1.75
CDH13P55290 RN7SKP277-201ENST00000516895 283 ntBASIC4.12□□□□□ -1.75
CDH13P55290 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.12□□□□□ -1.75
CDH13P55290 AC034205.1-201ENST00000520621 638 ntBASIC4.12□□□□□ -1.75
CDH13P55290 AC090281.1-201ENST00000523019 276 ntBASIC4.12□□□□□ -1.75
CDH13P55290 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.12□□□□□ -1.75
CDH13P55290 AP000790.1-201ENST00000528891 737 ntBASIC4.12□□□□□ -1.75
CDH13P55290 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC4.12□□□□□ -1.75
CDH13P55290 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC4.12□□□□□ -1.75
CDH13P55290 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
CDH13P55290 ELOCP28-201ENST00000590044 317 ntBASIC4.12□□□□□ -1.75
CDH13P55290 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.12□□□□□ -1.75
CDH13P55290 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC4.12□□□□□ -1.75
CDH13P55290 AL390838.2-201ENST00000602394 274 ntBASIC4.12□□□□□ -1.75
CDH13P55290 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC4.12□□□□□ -1.75
CDH13P55290 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.12□□□□□ -1.75
CDH13P55290 AC023158.2-201ENST00000614876 543 ntBASIC4.12□□□□□ -1.75
CDH13P55290 AC098679.5-201ENST00000624394 571 ntBASIC4.12□□□□□ -1.75
CDH13P55290 UGP2-231ENST00000627474 264 ntTSL 5 BASIC4.12□□□□□ -1.75
CDH13P55290 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CDH13P55290 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.12□□□□□ -1.75
CDH13P55290 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.12□□□□□ -1.75
CDH13P55290 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.12□□□□□ -1.75
CDH13P55290 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CDH13P55290 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.12□□□□□ -1.75
CDH13P55290 AC117529.2-201ENST00000512159 2068 ntBASIC4.12□□□□□ -1.75
CDH13P55290 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CDH13P55290 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CDH13P55290 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.12□□□□□ -1.75
CDH13P55290 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CDH13P55290 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CDH13P55290 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.11□□□□□ -1.75
CDH13P55290 RNU6-492P-201ENST00000363035 104 ntBASIC4.11□□□□□ -1.75
CDH13P55290 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
CDH13P55290 RNA5SP36-201ENST00000410197 133 ntBASIC4.11□□□□□ -1.75
CDH13P55290 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC4.11□□□□□ -1.75
CDH13P55290 BOLA3P4-201ENST00000418151 400 ntBASIC4.11□□□□□ -1.75
CDH13P55290 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC4.11□□□□□ -1.75
CDH13P55290 ZDHHC20P2-201ENST00000424108 429 ntBASIC4.11□□□□□ -1.75
CDH13P55290 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC4.11□□□□□ -1.75
CDH13P55290 USP12PY-201ENST00000427677 1064 ntBASIC4.11□□□□□ -1.75
CDH13P55290 AC005345.1-201ENST00000431868 217 ntBASIC4.11□□□□□ -1.75
CDH13P55290 GSTA7P-201ENST00000438425 448 ntBASIC4.11□□□□□ -1.75
CDH13P55290 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC4.11□□□□□ -1.75
CDH13P55290 AC093155.1-201ENST00000440164 826 ntBASIC4.11□□□□□ -1.75
CDH13P55290 AL512326.1-201ENST00000443050 721 ntBASIC4.11□□□□□ -1.75
CDH13P55290 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.11□□□□□ -1.75
CDH13P55290 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC4.11□□□□□ -1.75
CDH13P55290 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC4.11□□□□□ -1.75
CDH13P55290 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.11□□□□□ -1.75
CDH13P55290 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC4.11□□□□□ -1.75
CDH13P55290 MTND2P28-201ENST00000457540 1044 ntBASIC4.11□□□□□ -1.75
CDH13P55290 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
CDH13P55290 RPS29P19-201ENST00000479709 171 ntBASIC4.11□□□□□ -1.75
CDH13P55290 RPL21P103-201ENST00000479921 488 ntBASIC4.11□□□□□ -1.75
CDH13P55290 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.11□□□□□ -1.75
CDH13P55290 RPS26P15-201ENST00000488067 348 ntBASIC4.11□□□□□ -1.75
CDH13P55290 RNF138P1-201ENST00000502765 546 ntBASIC4.11□□□□□ -1.75
CDH13P55290 AC084024.2-201ENST00000503480 791 ntBASIC4.11□□□□□ -1.75
CDH13P55290 BNIP3P41-201ENST00000503774 571 ntBASIC4.11□□□□□ -1.75
CDH13P55290 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC4.11□□□□□ -1.75
CDH13P55290 AC114322.1-201ENST00000506771 926 ntBASIC4.11□□□□□ -1.75
CDH13P55290 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.11□□□□□ -1.75
CDH13P55290 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC4.11□□□□□ -1.75
CDH13P55290 AC016065.2-201ENST00000514530 444 ntBASIC4.11□□□□□ -1.75
CDH13P55290 RN7SKP92-201ENST00000517266 244 ntBASIC4.11□□□□□ -1.75
CDH13P55290 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC4.11□□□□□ -1.75
CDH13P55290 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.11□□□□□ -1.75
CDH13P55290 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.11□□□□□ -1.75
CDH13P55290 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.11□□□□□ -1.75
CDH13P55290 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.11□□□□□ -1.75
CDH13P55290 AP001180.3-201ENST00000582221 145 ntBASIC4.11□□□□□ -1.75
CDH13P55290 AC015688.2-201ENST00000584523 262 ntBASIC4.11□□□□□ -1.75
CDH13P55290 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CDH13P55290 AC068790.5-201ENST00000602741 355 ntBASIC4.11□□□□□ -1.75
CDH13P55290 AC008536.1-201ENST00000602872 669 ntBASIC4.11□□□□□ -1.75
CDH13P55290 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.11□□□□□ -1.75
CDH13P55290 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC4.11□□□□□ -1.75
CDH13P55290 AC099669.2-201ENST00000616549 437 ntBASIC4.11□□□□□ -1.75
CDH13P55290 AC068722.2-201ENST00000618734 544 ntBASIC4.11□□□□□ -1.75
CDH13P55290 AL158163.2-201ENST00000619110 700 ntBASIC4.11□□□□□ -1.75
CDH13P55290 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC4.11□□□□□ -1.75
CDH13P55290 RMST_9.1-201ENST00000619945 193 ntBASIC4.11□□□□□ -1.75
CDH13P55290 AP001002.2-201ENST00000625137 386 ntBASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms