Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.04□□□□□ -1.76
SSR1P43307 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.04□□□□□ -1.76
SSR1P43307 AL136295.6-201ENST00000610486 658 ntBASIC4.04□□□□□ -1.76
SSR1P43307 AC009032.1-201ENST00000617574 431 ntBASIC4.04□□□□□ -1.76
SSR1P43307 ATE1-AS1-202ENST00000636460 506 ntBASIC4.04□□□□□ -1.76
SSR1P43307 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC4.04□□□□□ -1.76
SSR1P43307 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
SSR1P43307 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SSR1P43307 AC009501.3-201ENST00000605001 1352 ntBASIC4.03□□□□□ -1.76
SSR1P43307 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SSR1P43307 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SSR1P43307 SPRR2C-201ENST00000290702 219 ntBASIC4.03□□□□□ -1.76
SSR1P43307 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SSR1P43307 SNORA51.2-201ENST00000364595 132 ntBASIC4.03□□□□□ -1.76
SSR1P43307 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
SSR1P43307 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
SSR1P43307 MIR141-201ENST00000384975 95 ntBASIC4.03□□□□□ -1.76
SSR1P43307 HSPE1P8-201ENST00000406997 288 ntBASIC4.03□□□□□ -1.76
SSR1P43307 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.03□□□□□ -1.76
SSR1P43307 EI24P1-201ENST00000416584 867 ntBASIC4.03□□□□□ -1.76
SSR1P43307 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC4.03□□□□□ -1.76
SSR1P43307 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC4.03□□□□□ -1.76
SSR1P43307 TRIM60P18-201ENST00000441518 828 ntBASIC4.03□□□□□ -1.76
SSR1P43307 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC4.03□□□□□ -1.76
SSR1P43307 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC4.03□□□□□ -1.76
SSR1P43307 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.03□□□□□ -1.76
SSR1P43307 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.03□□□□□ -1.76
SSR1P43307 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC4.03□□□□□ -1.76
SSR1P43307 TMEM248P1-201ENST00000510579 951 ntBASIC4.03□□□□□ -1.76
SSR1P43307 MTCO1P35-201ENST00000515270 228 ntBASIC4.03□□□□□ -1.76
SSR1P43307 RN7SKP122-201ENST00000515923 296 ntBASIC4.03□□□□□ -1.76
SSR1P43307 SNORA48.9-201ENST00000516419 162 ntBASIC4.03□□□□□ -1.76
SSR1P43307 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC4.03□□□□□ -1.76
SSR1P43307 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC4.03□□□□□ -1.76
SSR1P43307 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC4.03□□□□□ -1.76
SSR1P43307 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC4.03□□□□□ -1.76
SSR1P43307 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC4.03□□□□□ -1.76
SSR1P43307 AL121594.4-201ENST00000556211 1196 ntBASIC4.03□□□□□ -1.76
SSR1P43307 ZNF92P3-201ENST00000596594 954 ntBASIC4.03□□□□□ -1.76
SSR1P43307 AL606490.9-201ENST00000603331 271 ntBASIC4.03□□□□□ -1.76
SSR1P43307 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC4.03□□□□□ -1.76
SSR1P43307 AL355802.4-201ENST00000607635 548 ntBASIC4.03□□□□□ -1.76
SSR1P43307 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
SSR1P43307 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC4.03□□□□□ -1.76
SSR1P43307 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC4.03□□□□□ -1.76
SSR1P43307 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.77
SSR1P43307 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.03□□□□□ -1.77
SSR1P43307 SNORA7.2-201ENST00000364446 145 ntBASIC4.02□□□□□ -1.77
SSR1P43307 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4.02□□□□□ -1.77
SSR1P43307 RNA5SP317-201ENST00000410176 116 ntBASIC4.02□□□□□ -1.77
SSR1P43307 RNA5SP311-201ENST00000411290 116 ntBASIC4.02□□□□□ -1.77
SSR1P43307 CRYBB2P1-203ENST00000415709 538 ntBASIC4.02□□□□□ -1.77
SSR1P43307 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC4.02□□□□□ -1.77
SSR1P43307 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4.02□□□□□ -1.77
SSR1P43307 MTCO3P4-201ENST00000419236 787 ntBASIC4.02□□□□□ -1.77
SSR1P43307 AL160175.1-201ENST00000428124 247 ntBASIC4.02□□□□□ -1.77
SSR1P43307 AC114878.1-201ENST00000441166 358 ntBASIC4.02□□□□□ -1.77
SSR1P43307 AC098824.1-201ENST00000453565 980 ntBASIC4.02□□□□□ -1.77
SSR1P43307 BTF3L4P4-201ENST00000506381 449 ntBASIC4.02□□□□□ -1.77
SSR1P43307 RNA5SP208-201ENST00000516156 78 ntBASIC4.02□□□□□ -1.77
SSR1P43307 RNA5SP315-201ENST00000516340 116 ntBASIC4.02□□□□□ -1.77
SSR1P43307 RNA5SP312-201ENST00000517068 116 ntBASIC4.02□□□□□ -1.77
SSR1P43307 YPEL5P3-201ENST00000547227 352 ntBASIC4.02□□□□□ -1.77
SSR1P43307 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.02□□□□□ -1.77
SSR1P43307 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
SSR1P43307 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC4.02□□□□□ -1.77
SSR1P43307 AL133393.1-201ENST00000603277 287 ntBASIC4.02□□□□□ -1.77
SSR1P43307 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC4.02□□□□□ -1.77
SSR1P43307 AL354760.1-201ENST00000608357 643 ntBASIC4.02□□□□□ -1.77
SSR1P43307 RMST_8.1-201ENST00000610287 165 ntBASIC4.02□□□□□ -1.77
SSR1P43307 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC4.02□□□□□ -1.77
SSR1P43307 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.02□□□□□ -1.77
SSR1P43307 MIR492-201ENST00000638676 116 ntBASIC4.02□□□□□ -1.77
SSR1P43307 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
SSR1P43307 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
SSR1P43307 LINC00561-201ENST00000565815 2738 ntBASIC4.02□□□□□ -1.77
SSR1P43307 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.02□□□□□ -1.77
SSR1P43307 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SSR1P43307 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SSR1P43307 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SSR1P43307 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SSR1P43307 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
SSR1P43307 SNORA62-201ENST00000365493 153 ntBASIC4.01□□□□□ -1.77
SSR1P43307 LIPT1P1-201ENST00000415870 1186 ntBASIC4.01□□□□□ -1.77
SSR1P43307 COX6CP17-201ENST00000421389 185 ntBASIC4.01□□□□□ -1.77
SSR1P43307 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
SSR1P43307 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC4.01□□□□□ -1.77
SSR1P43307 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC4.01□□□□□ -1.77
SSR1P43307 HSPE1P28-201ENST00000443139 211 ntBASIC4.01□□□□□ -1.77
SSR1P43307 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC4.01□□□□□ -1.77
SSR1P43307 TPMTP4-201ENST00000450749 678 ntBASIC4.01□□□□□ -1.77
SSR1P43307 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC4.01□□□□□ -1.77
SSR1P43307 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC4.01□□□□□ -1.77
SSR1P43307 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.01□□□□□ -1.77
SSR1P43307 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4.01□□□□□ -1.77
SSR1P43307 RPS15AP1-201ENST00000457423 391 ntBASIC4.01□□□□□ -1.77
SSR1P43307 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
SSR1P43307 AC025459.1-201ENST00000504072 156 ntBASIC4.01□□□□□ -1.77
SSR1P43307 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.01□□□□□ -1.77
SSR1P43307 AC093755.1-201ENST00000512950 1023 ntBASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms