Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 U1.23-201ENST00000610293 146 ntBASIC3.37□□□□□ -1.87
HTTP42858 RNU1-68P-201ENST00000615382 146 ntBASIC3.37□□□□□ -1.87
HTTP42858 AL158062.1-201ENST00000619632 745 ntBASIC3.37□□□□□ -1.87
HTTP42858 U1.39-201ENST00000621562 146 ntBASIC3.37□□□□□ -1.87
HTTP42858 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
HTTP42858 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC3.37□□□□□ -1.87
HTTP42858 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC3.37□□□□□ -1.87
HTTP42858 AC027287.1-201ENST00000553115 1453 ntBASIC3.37□□□□□ -1.87
HTTP42858 DMD-205ENST00000359836 7339 ntTSL 5 BASIC3.37□□□□□ -1.87
HTTP42858 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
HTTP42858 AC112492.1-201ENST00000449607 712 ntBASIC3.37□□□□□ -1.87
HTTP42858 RPL23AP67-201ENST00000465341 474 ntBASIC3.37□□□□□ -1.87
HTTP42858 RPL31P13-201ENST00000484151 370 ntBASIC3.37□□□□□ -1.87
HTTP42858 EEF1A1P37-201ENST00000522748 715 ntBASIC3.37□□□□□ -1.87
HTTP42858 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC3.37□□□□□ -1.87
HTTP42858 AC107016.2-201ENST00000547968 190 ntBASIC3.37□□□□□ -1.87
HTTP42858 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC3.37□□□□□ -1.87
HTTP42858 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.37□□□□□ -1.87
HTTP42858 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
HTTP42858 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
HTTP42858 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC3.36□□□□□ -1.87
HTTP42858 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
HTTP42858 MIR513A2-201ENST00000385249 127 ntBASIC3.36□□□□□ -1.87
HTTP42858 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.36□□□□□ -1.87
HTTP42858 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC3.36□□□□□ -1.87
HTTP42858 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC3.36□□□□□ -1.87
HTTP42858 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.36□□□□□ -1.87
HTTP42858 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.36□□□□□ -1.87
HTTP42858 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC3.36□□□□□ -1.87
HTTP42858 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
HTTP42858 MTCO1P9-201ENST00000505577 1534 ntBASIC3.36□□□□□ -1.87
HTTP42858 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
HTTP42858 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
HTTP42858 AP002512.4-202ENST00000641599 4530 ntBASIC3.36□□□□□ -1.87
HTTP42858 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC3.36□□□□□ -1.87
HTTP42858 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
HTTP42858 TMTC2-204ENST00000549919 6211 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
HTTP42858 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
HTTP42858 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
HTTP42858 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.36□□□□□ -1.87
HTTP42858 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
HTTP42858 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.36□□□□□ -1.87
HTTP42858 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
HTTP42858 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC3.35□□□□□ -1.87
HTTP42858 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
HTTP42858 HMGB3P18-201ENST00000406327 590 ntBASIC3.35□□□□□ -1.87
HTTP42858 WASF1P1-201ENST00000447560 1131 ntBASIC3.35□□□□□ -1.87
HTTP42858 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC3.35□□□□□ -1.87
HTTP42858 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
HTTP42858 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
HTTP42858 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
HTTP42858 ISCA1P6-201ENST00000427740 390 ntBASIC3.35□□□□□ -1.87
HTTP42858 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC3.35□□□□□ -1.87
HTTP42858 ELOCP18-201ENST00000434209 337 ntBASIC3.35□□□□□ -1.87
HTTP42858 DEFB122-202ENST00000569013 197 ntBASIC3.35□□□□□ -1.87
HTTP42858 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
HTTP42858 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
HTTP42858 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
HTTP42858 AL356968.1-201ENST00000416622 474 ntBASIC3.35□□□□□ -1.87
HTTP42858 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC3.35□□□□□ -1.87
HTTP42858 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC3.35□□□□□ -1.87
HTTP42858 RPL23AP23-201ENST00000452590 471 ntBASIC3.35□□□□□ -1.87
HTTP42858 AC133134.1-201ENST00000466800 359 ntBASIC3.35□□□□□ -1.87
HTTP42858 TRBV8-2-201ENST00000475637 270 ntBASIC3.35□□□□□ -1.87
HTTP42858 RPS4XP22-201ENST00000480755 780 ntBASIC3.35□□□□□ -1.87
HTTP42858 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
HTTP42858 AC025754.2-201ENST00000606491 432 ntBASIC3.35□□□□□ -1.87
HTTP42858 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
HTTP42858 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC3.34□□□□□ -1.87
HTTP42858 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
HTTP42858 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
HTTP42858 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
HTTP42858 MIR184-201ENST00000384962 84 ntBASIC3.34□□□□□ -1.87
HTTP42858 RNU6ATAC15P-201ENST00000408279 121 ntBASIC3.34□□□□□ -1.87
HTTP42858 MIR1289-2-201ENST00000408360 111 ntBASIC3.34□□□□□ -1.87
HTTP42858 RNU2-52P-201ENST00000410680 190 ntBASIC3.34□□□□□ -1.87
HTTP42858 AC002075.2-201ENST00000425207 252 ntBASIC3.34□□□□□ -1.87
HTTP42858 AC099560.2-201ENST00000457554 255 ntBASIC3.34□□□□□ -1.87
HTTP42858 METTL15P1-201ENST00000481421 1045 ntBASIC3.34□□□□□ -1.87
HTTP42858 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.34□□□□□ -1.87
HTTP42858 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC3.34□□□□□ -1.87
HTTP42858 BTF3L4P4-201ENST00000506381 449 ntBASIC3.34□□□□□ -1.87
HTTP42858 AP003122.3-201ENST00000526316 255 ntBASIC3.34□□□□□ -1.87
HTTP42858 SERPINE4P-201ENST00000554978 281 ntBASIC3.34□□□□□ -1.87
HTTP42858 MIR6817-201ENST00000615588 66 ntBASIC3.34□□□□□ -1.87
HTTP42858 AL512643.1-201ENST00000635735 524 ntBASIC3.34□□□□□ -1.87
HTTP42858 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.34□□□□□ -1.87
HTTP42858 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.34□□□□□ -1.87
HTTP42858 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
HTTP42858 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
HTTP42858 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC3.34□□□□□ -1.88
HTTP42858 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC3.34□□□□□ -1.88
HTTP42858 AC006840.1-201ENST00000623069 542 ntBASIC3.34□□□□□ -1.88
HTTP42858 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
HTTP42858 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC3.34□□□□□ -1.88
HTTP42858 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
HTTP42858 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC3.33□□□□□ -1.88
HTTP42858 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.33□□□□□ -1.88
HTTP42858 HSPE1P8-201ENST00000406997 288 ntBASIC3.33□□□□□ -1.88
HTTP42858 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms