Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC3.67□□□□□ -1.82
RORAP35398 Z82195.1-201ENST00000604558 398 ntBASIC3.67□□□□□ -1.82
RORAP35398 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.67□□□□□ -1.82
RORAP35398 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
RORAP35398 MIR4278-201ENST00000636094 69 ntBASIC3.67□□□□□ -1.82
RORAP35398 AF127577.6-201ENST00000623352 2191 ntBASIC3.67□□□□□ -1.82
RORAP35398 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.67□□□□□ -1.82
RORAP35398 AC119744.1-201ENST00000454746 1715 ntBASIC3.67□□□□□ -1.82
RORAP35398 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
RORAP35398 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
RORAP35398 ZNF962P-201ENST00000443465 3140 ntBASIC3.66□□□□□ -1.82
RORAP35398 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
RORAP35398 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.66□□□□□ -1.82
RORAP35398 AL592494.2-201ENST00000425455 1548 ntBASIC3.66□□□□□ -1.82
RORAP35398 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
RORAP35398 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
RORAP35398 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
RORAP35398 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
RORAP35398 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.66□□□□□ -1.82
RORAP35398 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
RORAP35398 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
RORAP35398 SNORA71.3-201ENST00000362582 128 ntBASIC3.66□□□□□ -1.82
RORAP35398 SNORD115-48-201ENST00000364764 76 ntBASIC3.66□□□□□ -1.82
RORAP35398 RNA5SP189-201ENST00000364920 115 ntBASIC3.66□□□□□ -1.82
RORAP35398 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
RORAP35398 RNU6-883P-201ENST00000384597 107 ntBASIC3.66□□□□□ -1.82
RORAP35398 MIR200C-201ENST00000384980 68 ntBASIC3.66□□□□□ -1.82
RORAP35398 MIR449B-201ENST00000384995 97 ntBASIC3.66□□□□□ -1.82
RORAP35398 MTND3P20-201ENST00000407663 186 ntBASIC3.66□□□□□ -1.82
RORAP35398 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.66□□□□□ -1.82
RORAP35398 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
RORAP35398 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.66□□□□□ -1.82
RORAP35398 AL591419.1-201ENST00000427423 339 ntBASIC3.66□□□□□ -1.82
RORAP35398 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
RORAP35398 OR4F13P-201ENST00000428478 931 ntBASIC3.66□□□□□ -1.82
RORAP35398 ZFAND6P1-201ENST00000434138 605 ntBASIC3.66□□□□□ -1.82
RORAP35398 Z74696.2-201ENST00000436514 498 ntBASIC3.66□□□□□ -1.82
RORAP35398 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
RORAP35398 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC3.66□□□□□ -1.82
RORAP35398 AC009263.1-201ENST00000441193 1239 ntBASIC3.66□□□□□ -1.82
RORAP35398 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.66□□□□□ -1.82
RORAP35398 ARL5AP2-201ENST00000444698 533 ntBASIC3.66□□□□□ -1.82
RORAP35398 RANP8-201ENST00000444720 713 ntBASIC3.66□□□□□ -1.82
RORAP35398 AL358232.1-201ENST00000448030 501 ntBASIC3.66□□□□□ -1.82
RORAP35398 CFTRP1-201ENST00000456646 183 ntBASIC3.66□□□□□ -1.82
RORAP35398 AL133162.1-201ENST00000463228 453 ntBASIC3.66□□□□□ -1.82
RORAP35398 AC146507.1-201ENST00000468335 354 ntBASIC3.66□□□□□ -1.82
RORAP35398 AC069499.1-201ENST00000489433 509 ntBASIC3.66□□□□□ -1.82
RORAP35398 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.66□□□□□ -1.82
RORAP35398 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.66□□□□□ -1.82
RORAP35398 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.66□□□□□ -1.82
RORAP35398 OR4A12P-201ENST00000530847 918 ntBASIC3.66□□□□□ -1.82
RORAP35398 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC3.66□□□□□ -1.82
RORAP35398 OR6C73P-201ENST00000546432 358 ntBASIC3.66□□□□□ -1.82
RORAP35398 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.66□□□□□ -1.82
RORAP35398 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.66□□□□□ -1.82
RORAP35398 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.66□□□□□ -1.82
RORAP35398 AL391261.4-201ENST00000616012 481 ntBASIC3.66□□□□□ -1.82
RORAP35398 AC024023.1-201ENST00000624530 922 ntBASIC3.66□□□□□ -1.82
RORAP35398 AC244205.2-202ENST00000635781 342 ntBASIC3.66□□□□□ -1.82
RORAP35398 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
RORAP35398 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.66□□□□□ -1.82
RORAP35398 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
RORAP35398 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
RORAP35398 AL021368.2-201ENST00000606125 5352 ntBASIC3.65□□□□□ -1.82
RORAP35398 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
RORAP35398 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC3.65□□□□□ -1.82
RORAP35398 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
RORAP35398 RNA5SP391-201ENST00000363456 119 ntBASIC3.65□□□□□ -1.83
RORAP35398 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.65□□□□□ -1.83
RORAP35398 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
RORAP35398 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC3.65□□□□□ -1.83
RORAP35398 HMGB1P10-201ENST00000395823 563 ntBASIC3.65□□□□□ -1.83
RORAP35398 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC3.65□□□□□ -1.83
RORAP35398 AL451062.2-201ENST00000427515 271 ntBASIC3.65□□□□□ -1.83
RORAP35398 MTND4LP7-201ENST00000431728 294 ntBASIC3.65□□□□□ -1.83
RORAP35398 ZNF965P-201ENST00000432501 817 ntBASIC3.65□□□□□ -1.83
RORAP35398 KCTD9P3-201ENST00000434597 1169 ntBASIC3.65□□□□□ -1.83
RORAP35398 SNRPGP3-201ENST00000469405 227 ntBASIC3.65□□□□□ -1.83
RORAP35398 RPL7L1P8-201ENST00000469911 741 ntBASIC3.65□□□□□ -1.83
RORAP35398 AC025181.1-201ENST00000477507 416 ntBASIC3.65□□□□□ -1.83
RORAP35398 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC3.65□□□□□ -1.83
RORAP35398 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
RORAP35398 RPL7P24-201ENST00000493052 752 ntBASIC3.65□□□□□ -1.83
RORAP35398 AC111193.1-201ENST00000504097 155 ntBASIC3.65□□□□□ -1.83
RORAP35398 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC3.65□□□□□ -1.83
RORAP35398 AC005351.1-201ENST00000511152 786 ntBASIC3.65□□□□□ -1.83
RORAP35398 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC3.65□□□□□ -1.83
RORAP35398 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.65□□□□□ -1.83
RORAP35398 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC3.65□□□□□ -1.83
RORAP35398 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
RORAP35398 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
RORAP35398 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC3.65□□□□□ -1.83
RORAP35398 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC3.65□□□□□ -1.83
RORAP35398 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC3.65□□□□□ -1.83
RORAP35398 CKS1BP1-201ENST00000555221 240 ntBASIC3.65□□□□□ -1.83
RORAP35398 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC3.65□□□□□ -1.83
RORAP35398 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.65□□□□□ -1.83
RORAP35398 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC3.65□□□□□ -1.83
RORAP35398 CCDC58P3-201ENST00000590792 430 ntBASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms