Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.1□□□□□ -1.75
HLA-DPA1P20036 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.1□□□□□ -1.75
HLA-DPA1P20036 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
HLA-DPA1P20036 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC4.09□□□□□ -1.75
HLA-DPA1P20036 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
HLA-DPA1P20036 AL121657.1-201ENST00000327215 531 ntBASIC4.09□□□□□ -1.75
HLA-DPA1P20036 SNORD74.4-201ENST00000364129 80 ntBASIC4.09□□□□□ -1.75
HLA-DPA1P20036 RNU6-374P-201ENST00000364146 108 ntBASIC4.09□□□□□ -1.75
HLA-DPA1P20036 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
HLA-DPA1P20036 U6.112-201ENST00000384129 70 ntBASIC4.09□□□□□ -1.75
HLA-DPA1P20036 AL022722.2-201ENST00000402519 180 ntBASIC4.09□□□□□ -1.75
HLA-DPA1P20036 LAP3P1-201ENST00000403648 294 ntBASIC4.09□□□□□ -1.75
HLA-DPA1P20036 MIR1251-201ENST00000408552 70 ntBASIC4.09□□□□□ -1.75
HLA-DPA1P20036 RNU2-37P-201ENST00000410695 177 ntBASIC4.09□□□□□ -1.75
HLA-DPA1P20036 HSPE1P12-201ENST00000412576 301 ntBASIC4.09□□□□□ -1.75
HLA-DPA1P20036 TPT1P2-201ENST00000413105 503 ntBASIC4.09□□□□□ -1.75
HLA-DPA1P20036 AC233981.1-201ENST00000423224 461 ntBASIC4.09□□□□□ -1.75
HLA-DPA1P20036 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC4.09□□□□□ -1.75
HLA-DPA1P20036 AC004975.1-201ENST00000428733 208 ntBASIC4.09□□□□□ -1.75
HLA-DPA1P20036 MTCO1P54-201ENST00000430139 712 ntBASIC4.09□□□□□ -1.75
HLA-DPA1P20036 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC4.09□□□□□ -1.75
HLA-DPA1P20036 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC4.09□□□□□ -1.75
HLA-DPA1P20036 AC114755.5-201ENST00000447760 831 ntBASIC4.09□□□□□ -1.75
HLA-DPA1P20036 OR51B8P-201ENST00000449892 769 ntBASIC4.09□□□□□ -1.75
HLA-DPA1P20036 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.09□□□□□ -1.75
HLA-DPA1P20036 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4.09□□□□□ -1.75
HLA-DPA1P20036 AC010307.1-201ENST00000467206 836 ntBASIC4.09□□□□□ -1.75
HLA-DPA1P20036 AC091959.2-201ENST00000477363 321 ntBASIC4.09□□□□□ -1.75
HLA-DPA1P20036 TMED11P-201ENST00000479478 690 ntBASIC4.09□□□□□ -1.75
HLA-DPA1P20036 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
HLA-DPA1P20036 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
HLA-DPA1P20036 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
HLA-DPA1P20036 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC4.09□□□□□ -1.75
HLA-DPA1P20036 AC119751.1-201ENST00000513357 765 ntBASIC4.09□□□□□ -1.75
HLA-DPA1P20036 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
HLA-DPA1P20036 IGLVIV-53-201ENST00000520107 367 ntBASIC4.09□□□□□ -1.75
HLA-DPA1P20036 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC4.09□□□□□ -1.75
HLA-DPA1P20036 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC4.09□□□□□ -1.75
HLA-DPA1P20036 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC4.09□□□□□ -1.75
HLA-DPA1P20036 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC4.09□□□□□ -1.75
HLA-DPA1P20036 AC107954.1-201ENST00000565906 727 ntBASIC4.09□□□□□ -1.75
HLA-DPA1P20036 CYP2C60P-201ENST00000566088 139 ntBASIC4.09□□□□□ -1.75
HLA-DPA1P20036 AC022968.1-201ENST00000567372 442 ntBASIC4.09□□□□□ -1.75
HLA-DPA1P20036 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC4.09□□□□□ -1.75
HLA-DPA1P20036 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC4.09□□□□□ -1.75
HLA-DPA1P20036 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC4.09□□□□□ -1.75
HLA-DPA1P20036 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC4.09□□□□□ -1.75
HLA-DPA1P20036 AC020910.2-201ENST00000603635 610 ntBASIC4.09□□□□□ -1.75
HLA-DPA1P20036 AC012603.1-201ENST00000606424 528 ntBASIC4.09□□□□□ -1.75
HLA-DPA1P20036 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.09□□□□□ -1.75
HLA-DPA1P20036 AC015813.4-201ENST00000610469 179 ntBASIC4.09□□□□□ -1.75
HLA-DPA1P20036 AC105227.2-201ENST00000615075 605 ntBASIC4.09□□□□□ -1.75
HLA-DPA1P20036 AC090506.2-201ENST00000624521 419 ntBASIC4.09□□□□□ -1.75
HLA-DPA1P20036 AL773545.4-201ENST00000637262 310 ntBASIC4.09□□□□□ -1.75
HLA-DPA1P20036 AL513478.4-201ENST00000641636 310 ntBASIC4.09□□□□□ -1.75
HLA-DPA1P20036 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.09□□□□□ -1.75
HLA-DPA1P20036 AL355578.1-201ENST00000607405 1328 ntBASIC4.09□□□□□ -1.75
HLA-DPA1P20036 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
HLA-DPA1P20036 MTND5P31-201ENST00000419366 1374 ntBASIC4.09□□□□□ -1.75
HLA-DPA1P20036 ZNF37BP-203ENST00000452306 1352 ntBASIC4.09□□□□□ -1.75
HLA-DPA1P20036 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
HLA-DPA1P20036 SGO1P1-201ENST00000603525 1447 ntBASIC4.09□□□□□ -1.75
HLA-DPA1P20036 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
HLA-DPA1P20036 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
HLA-DPA1P20036 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.08□□□□□ -1.76
HLA-DPA1P20036 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
HLA-DPA1P20036 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
HLA-DPA1P20036 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
HLA-DPA1P20036 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
HLA-DPA1P20036 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
HLA-DPA1P20036 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
HLA-DPA1P20036 MT-TC-201ENST00000387405 66 ntBASIC4.08□□□□□ -1.76
HLA-DPA1P20036 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
HLA-DPA1P20036 SNORA3C-201ENST00000408792 125 ntBASIC4.08□□□□□ -1.76
HLA-DPA1P20036 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC4.08□□□□□ -1.76
HLA-DPA1P20036 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.08□□□□□ -1.76
HLA-DPA1P20036 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC4.08□□□□□ -1.76
HLA-DPA1P20036 VDAC1P6-201ENST00000430062 855 ntBASIC4.08□□□□□ -1.76
HLA-DPA1P20036 RPL21P133-201ENST00000443666 476 ntBASIC4.08□□□□□ -1.76
HLA-DPA1P20036 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC4.08□□□□□ -1.76
HLA-DPA1P20036 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC4.08□□□□□ -1.76
HLA-DPA1P20036 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.08□□□□□ -1.76
HLA-DPA1P20036 AP001086.1-201ENST00000494882 321 ntBASIC4.08□□□□□ -1.76
HLA-DPA1P20036 EXOC5P1-201ENST00000510543 1969 ntBASIC4.08□□□□□ -1.76
HLA-DPA1P20036 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.08□□□□□ -1.76
HLA-DPA1P20036 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC4.08□□□□□ -1.76
HLA-DPA1P20036 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.08□□□□□ -1.76
HLA-DPA1P20036 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC4.08□□□□□ -1.76
HLA-DPA1P20036 AC025884.1-201ENST00000556034 378 ntBASIC4.08□□□□□ -1.76
HLA-DPA1P20036 AC074051.3-201ENST00000570238 358 ntBASIC4.08□□□□□ -1.76
HLA-DPA1P20036 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.08□□□□□ -1.76
HLA-DPA1P20036 AC015911.5-201ENST00000587076 451 ntBASIC4.08□□□□□ -1.76
HLA-DPA1P20036 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.08□□□□□ -1.76
HLA-DPA1P20036 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
HLA-DPA1P20036 AL591034.3-201ENST00000605511 685 ntBASIC4.08□□□□□ -1.76
HLA-DPA1P20036 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
HLA-DPA1P20036 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.08□□□□□ -1.76
HLA-DPA1P20036 AC005156.1-201ENST00000613371 573 ntBASIC4.08□□□□□ -1.76
HLA-DPA1P20036 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC4.08□□□□□ -1.76
HLA-DPA1P20036 AF001550.2-201ENST00000636643 217 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 124.6 ms