Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 CR381670.1-201ENST00000624291 1693 ntBASIC3.81□□□□□ -1.8
XRCC1P18887 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.81□□□□□ -1.8
XRCC1P18887 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
XRCC1P18887 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.81□□□□□ -1.8
XRCC1P18887 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
XRCC1P18887 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.81□□□□□ -1.8
XRCC1P18887 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
XRCC1P18887 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
XRCC1P18887 RPS4XP5-202ENST00000449995 1334 ntBASIC3.81□□□□□ -1.8
XRCC1P18887 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
XRCC1P18887 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
XRCC1P18887 ENSAP3-201ENST00000312710 333 ntBASIC3.81□□□□□ -1.8
XRCC1P18887 RNU6-543P-201ENST00000362576 108 ntBASIC3.81□□□□□ -1.8
XRCC1P18887 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC3.81□□□□□ -1.8
XRCC1P18887 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.81□□□□□ -1.8
XRCC1P18887 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
XRCC1P18887 RNU6-1005P-201ENST00000384519 107 ntBASIC3.81□□□□□ -1.8
XRCC1P18887 ATP5F1P6-201ENST00000402768 767 ntBASIC3.81□□□□□ -1.8
XRCC1P18887 HMGB3P18-201ENST00000406327 590 ntBASIC3.81□□□□□ -1.8
XRCC1P18887 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.81□□□□□ -1.8
XRCC1P18887 AC008173.1-201ENST00000418901 264 ntBASIC3.81□□□□□ -1.8
XRCC1P18887 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC3.81□□□□□ -1.8
XRCC1P18887 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC3.81□□□□□ -1.8
XRCC1P18887 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC3.81□□□□□ -1.8
XRCC1P18887 AC068135.1-201ENST00000446164 246 ntBASIC3.81□□□□□ -1.8
XRCC1P18887 CYCSP53-201ENST00000455540 265 ntBASIC3.81□□□□□ -1.8
XRCC1P18887 RPS20P21-201ENST00000466859 343 ntBASIC3.81□□□□□ -1.8
XRCC1P18887 AC068305.1-201ENST00000497406 726 ntBASIC3.81□□□□□ -1.8
XRCC1P18887 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC3.81□□□□□ -1.8
XRCC1P18887 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.81□□□□□ -1.8
XRCC1P18887 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.81□□□□□ -1.8
XRCC1P18887 AC010306.1-201ENST00000523223 1117 ntBASIC3.81□□□□□ -1.8
XRCC1P18887 AC083923.1-201ENST00000523708 376 ntBASIC3.81□□□□□ -1.8
XRCC1P18887 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC3.81□□□□□ -1.8
XRCC1P18887 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC3.81□□□□□ -1.8
XRCC1P18887 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC3.81□□□□□ -1.8
XRCC1P18887 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.81□□□□□ -1.8
XRCC1P18887 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.81□□□□□ -1.8
XRCC1P18887 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC3.81□□□□□ -1.8
XRCC1P18887 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC3.81□□□□□ -1.8
XRCC1P18887 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC3.81□□□□□ -1.8
XRCC1P18887 AC009101.1-201ENST00000568135 242 ntBASIC3.81□□□□□ -1.8
XRCC1P18887 AC124283.4-201ENST00000581815 456 ntBASIC3.81□□□□□ -1.8
XRCC1P18887 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC3.81□□□□□ -1.8
XRCC1P18887 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC3.81□□□□□ -1.8
XRCC1P18887 AC015726.1-201ENST00000602353 681 ntBASIC3.81□□□□□ -1.8
XRCC1P18887 RPL21P136-201ENST00000605378 396 ntBASIC3.81□□□□□ -1.8
XRCC1P18887 FP236240.3-201ENST00000623061 327 ntBASIC3.81□□□□□ -1.8
XRCC1P18887 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.81□□□□□ -1.8
XRCC1P18887 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
XRCC1P18887 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.81□□□□□ -1.8
XRCC1P18887 ASNSP1-204ENST00000641977 1664 ntBASIC3.81□□□□□ -1.8
XRCC1P18887 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC3.8□□□□□ -1.8
XRCC1P18887 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
XRCC1P18887 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
XRCC1P18887 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
XRCC1P18887 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.8□□□□□ -1.8
XRCC1P18887 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC3.8□□□□□ -1.8
XRCC1P18887 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
XRCC1P18887 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.8□□□□□ -1.8
XRCC1P18887 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.8□□□□□ -1.8
XRCC1P18887 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
XRCC1P18887 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
XRCC1P18887 MIR30B-201ENST00000384850 88 ntBASIC3.8□□□□□ -1.8
XRCC1P18887 MIR554-201ENST00000384874 96 ntBASIC3.8□□□□□ -1.8
XRCC1P18887 ATF1P1-201ENST00000406040 927 ntBASIC3.8□□□□□ -1.8
XRCC1P18887 MTATP6P31-201ENST00000406985 692 ntBASIC3.8□□□□□ -1.8
XRCC1P18887 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.8□□□□□ -1.8
XRCC1P18887 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.8□□□□□ -1.8
XRCC1P18887 MTND2P15-201ENST00000418575 892 ntBASIC3.8□□□□□ -1.8
XRCC1P18887 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC3.8□□□□□ -1.8
XRCC1P18887 RPL21P109-201ENST00000422213 475 ntBASIC3.8□□□□□ -1.8
XRCC1P18887 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC3.8□□□□□ -1.8
XRCC1P18887 MTCO1P43-201ENST00000431831 488 ntBASIC3.8□□□□□ -1.8
XRCC1P18887 AL512661.1-201ENST00000434586 1253 ntBASIC3.8□□□□□ -1.8
XRCC1P18887 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC3.8□□□□□ -1.8
XRCC1P18887 MOB1AP2-201ENST00000446060 614 ntBASIC3.8□□□□□ -1.8
XRCC1P18887 AC239367.2-201ENST00000447309 705 ntBASIC3.8□□□□□ -1.8
XRCC1P18887 MTCO3P16-201ENST00000454456 754 ntBASIC3.8□□□□□ -1.8
XRCC1P18887 RN7SL542P-201ENST00000467147 294 ntBASIC3.8□□□□□ -1.8
XRCC1P18887 FTH1P24-201ENST00000503502 462 ntBASIC3.8□□□□□ -1.8
XRCC1P18887 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC3.8□□□□□ -1.8
XRCC1P18887 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.8□□□□□ -1.8
XRCC1P18887 AC112518.2-201ENST00000508565 425 ntBASIC3.8□□□□□ -1.8
XRCC1P18887 AC008565.1-201ENST00000509046 885 ntBASIC3.8□□□□□ -1.8
XRCC1P18887 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
XRCC1P18887 FTH1P9-201ENST00000513251 355 ntBASIC3.8□□□□□ -1.8
XRCC1P18887 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.8□□□□□ -1.8
XRCC1P18887 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
XRCC1P18887 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC3.8□□□□□ -1.8
XRCC1P18887 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.8□□□□□ -1.8
XRCC1P18887 OR4A12P-201ENST00000530847 918 ntBASIC3.8□□□□□ -1.8
XRCC1P18887 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.8□□□□□ -1.8
XRCC1P18887 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC3.8□□□□□ -1.8
XRCC1P18887 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.8□□□□□ -1.8
XRCC1P18887 MIR1254-2-201ENST00000579553 63 ntBASIC3.8□□□□□ -1.8
XRCC1P18887 AP003117.1-201ENST00000602771 554 ntBASIC3.8□□□□□ -1.8
XRCC1P18887 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
XRCC1P18887 AL390816.3-201ENST00000604527 1066 ntBASIC3.8□□□□□ -1.8
XRCC1P18887 BRDTP1-201ENST00000605735 677 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms