Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC5.24□□□□□ -1.57
ATF4P18848 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC5.24□□□□□ -1.57
ATF4P18848 AC011333.1-201ENST00000520587 436 ntTSL 3 BASIC5.24□□□□□ -1.57
ATF4P18848 AP001007.2-201ENST00000525429 593 ntTSL 3 BASIC5.24□□□□□ -1.57
ATF4P18848 CENPUP1-201ENST00000526649 1202 ntBASIC5.24□□□□□ -1.57
ATF4P18848 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC5.24□□□□□ -1.57
ATF4P18848 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC5.24□□□□□ -1.57
ATF4P18848 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC5.24□□□□□ -1.57
ATF4P18848 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC5.24□□□□□ -1.57
ATF4P18848 AC079075.1-201ENST00000559543 878 ntBASIC5.24□□□□□ -1.57
ATF4P18848 AC015917.1-201ENST00000579654 510 ntBASIC5.24□□□□□ -1.57
ATF4P18848 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC5.24□□□□□ -1.57
ATF4P18848 IGKV2OR2-7-201ENST00000604652 304 ntBASIC5.24□□□□□ -1.57
ATF4P18848 RN7SL126P-201ENST00000616400 299 ntBASIC5.24□□□□□ -1.57
ATF4P18848 AC104260.1-201ENST00000616660 539 ntBASIC5.24□□□□□ -1.57
ATF4P18848 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC5.24□□□□□ -1.57
ATF4P18848 AL354718.1-201ENST00000619764 589 ntBASIC5.24□□□□□ -1.57
ATF4P18848 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC5.24□□□□□ -1.57
ATF4P18848 MIR4275-201ENST00000636486 87 ntBASIC5.24□□□□□ -1.57
ATF4P18848 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
ATF4P18848 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
ATF4P18848 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
ATF4P18848 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC5.24□□□□□ -1.57
ATF4P18848 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.24□□□□□ -1.57
ATF4P18848 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
ATF4P18848 TMOD2-203ENST00000539962 3000 ntTSL 2 BASIC5.23□□□□□ -1.57
ATF4P18848 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
ATF4P18848 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
ATF4P18848 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.23□□□□□ -1.57
ATF4P18848 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
ATF4P18848 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
ATF4P18848 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
ATF4P18848 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC5.23□□□□□ -1.57
ATF4P18848 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.23□□□□□ -1.57
ATF4P18848 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
ATF4P18848 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
ATF4P18848 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.23□□□□□ -1.57
ATF4P18848 NACAP2-201ENST00000318548 624 ntBASIC5.23□□□□□ -1.57
ATF4P18848 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
ATF4P18848 RNU6-451P-201ENST00000362921 107 ntBASIC5.23□□□□□ -1.57
ATF4P18848 RNU4-44P-201ENST00000363050 141 ntBASIC5.23□□□□□ -1.57
ATF4P18848 Y_RNA.255-201ENST00000364581 97 ntBASIC5.23□□□□□ -1.57
ATF4P18848 RNU6-996P-201ENST00000365438 107 ntBASIC5.23□□□□□ -1.57
ATF4P18848 MIR551B-201ENST00000384984 96 ntBASIC5.23□□□□□ -1.57
ATF4P18848 RPL21P67-201ENST00000402896 478 ntBASIC5.23□□□□□ -1.57
ATF4P18848 AL133260.1-201ENST00000405720 405 ntBASIC5.23□□□□□ -1.57
ATF4P18848 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC5.23□□□□□ -1.57
ATF4P18848 AL359382.1-201ENST00000417838 426 ntTSL 5 BASIC5.23□□□□□ -1.57
ATF4P18848 AC099677.1-201ENST00000420575 175 ntBASIC5.23□□□□□ -1.57
ATF4P18848 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC5.23□□□□□ -1.57
ATF4P18848 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC5.23□□□□□ -1.57
ATF4P18848 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
ATF4P18848 SUMO2P3-201ENST00000438311 288 ntBASIC5.23□□□□□ -1.57
ATF4P18848 MTND4P25-201ENST00000441039 533 ntBASIC5.23□□□□□ -1.57
ATF4P18848 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.23□□□□□ -1.57
ATF4P18848 GAPDHP37-201ENST00000442317 968 ntBASIC5.23□□□□□ -1.57
ATF4P18848 CRYGGP-201ENST00000443337 145 ntBASIC5.23□□□□□ -1.57
ATF4P18848 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.23□□□□□ -1.57
ATF4P18848 AC009244.1-201ENST00000450566 258 ntBASIC5.23□□□□□ -1.57
ATF4P18848 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC5.23□□□□□ -1.57
ATF4P18848 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC5.23□□□□□ -1.57
ATF4P18848 AC063943.1-201ENST00000465434 453 ntBASIC5.23□□□□□ -1.57
ATF4P18848 AL163973.1-201ENST00000484753 577 ntBASIC5.23□□□□□ -1.57
ATF4P18848 RN7SL849P-201ENST00000485236 295 ntBASIC5.23□□□□□ -1.57
ATF4P18848 AC004453.1-201ENST00000487895 408 ntBASIC5.23□□□□□ -1.57
ATF4P18848 ZNF525-204ENST00000491101 569 ntTSL 4 BASIC5.23□□□□□ -1.57
ATF4P18848 RN7SL612P-201ENST00000497704 295 ntBASIC5.23□□□□□ -1.57
ATF4P18848 AC097173.1-201ENST00000505862 819 ntBASIC5.23□□□□□ -1.57
ATF4P18848 AC116562.3-201ENST00000506136 177 ntBASIC5.23□□□□□ -1.57
ATF4P18848 AC026427.2-201ENST00000506228 536 ntBASIC5.23□□□□□ -1.57
ATF4P18848 PCBP2P3-201ENST00000509726 843 ntBASIC5.23□□□□□ -1.57
ATF4P18848 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC5.23□□□□□ -1.57
ATF4P18848 RNA5SP318-201ENST00000516352 92 ntBASIC5.23□□□□□ -1.57
ATF4P18848 SCARNA18.2-201ENST00000516882 84 ntBASIC5.23□□□□□ -1.57
ATF4P18848 IGHV3-57-201ENST00000520143 280 ntBASIC5.23□□□□□ -1.57
ATF4P18848 AC100870.1-201ENST00000522035 505 ntBASIC5.23□□□□□ -1.57
ATF4P18848 AC068587.5-201ENST00000528506 175 ntBASIC5.23□□□□□ -1.57
ATF4P18848 AC022832.1-201ENST00000530718 645 ntBASIC5.23□□□□□ -1.57
ATF4P18848 AC123904.3-201ENST00000547218 814 ntBASIC5.23□□□□□ -1.57
ATF4P18848 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
ATF4P18848 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC5.23□□□□□ -1.57
ATF4P18848 OR1F2P-201ENST00000570470 933 ntBASIC5.23□□□□□ -1.57
ATF4P18848 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC5.23□□□□□ -1.57
ATF4P18848 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC5.23□□□□□ -1.57
ATF4P18848 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC5.23□□□□□ -1.57
ATF4P18848 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.23□□□□□ -1.57
ATF4P18848 AC011500.1-201ENST00000601963 469 ntBASIC5.23□□□□□ -1.57
ATF4P18848 AC092032.1-201ENST00000603090 165 ntBASIC5.23□□□□□ -1.57
ATF4P18848 AC010591.1-201ENST00000603941 649 ntBASIC5.23□□□□□ -1.57
ATF4P18848 AC087283.1-201ENST00000604029 1074 ntBASIC5.23□□□□□ -1.57
ATF4P18848 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC5.23□□□□□ -1.57
ATF4P18848 Y_RNA.804-201ENST00000615262 101 ntBASIC5.23□□□□□ -1.57
ATF4P18848 AL161420.1-201ENST00000619393 264 ntBASIC5.23□□□□□ -1.57
ATF4P18848 AC104985.2-201ENST00000620598 500 ntBASIC5.23□□□□□ -1.57
ATF4P18848 ZRANB2-AS2-220ENST00000623721 1133 ntTSL 5 BASIC5.23□□□□□ -1.57
ATF4P18848 BMS1P21-201ENST00000634565 365 ntBASIC5.23□□□□□ -1.57
ATF4P18848 AC024614.3-201ENST00000637860 256 ntBASIC5.23□□□□□ -1.57
ATF4P18848 CASC19-264ENST00000641912 1184 ntBASIC5.23□□□□□ -1.57
ATF4P18848 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
ATF4P18848 GABPAP-201ENST00000419271 1356 ntBASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms