Protein–RNA interactions for Protein: P13612

ITGA4, Integrin alpha-4, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4P13612 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.7□□□□□ -1.5
ITGA4P13612 AK6P1-201ENST00000540219 478 ntBASIC5.7□□□□□ -1.5
ITGA4P13612 RPL21P5-201ENST00000554662 472 ntBASIC5.7□□□□□ -1.5
ITGA4P13612 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC5.7□□□□□ -1.5
ITGA4P13612 SULT1C2P1-202ENST00000562418 459 ntBASIC5.7□□□□□ -1.5
ITGA4P13612 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC5.7□□□□□ -1.5
ITGA4P13612 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC5.7□□□□□ -1.5
ITGA4P13612 MEMO1P5-201ENST00000604810 406 ntBASIC5.7□□□□□ -1.5
ITGA4P13612 AL590282.1-201ENST00000610379 1136 ntBASIC5.7□□□□□ -1.5
ITGA4P13612 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.7□□□□□ -1.5
ITGA4P13612 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC5.7□□□□□ -1.5
ITGA4P13612 AC110994.2-201ENST00000635481 492 ntBASIC5.7□□□□□ -1.5
ITGA4P13612 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
ITGA4P13612 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
ITGA4P13612 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.7□□□□□ -1.5
ITGA4P13612 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
ITGA4P13612 AC019072.1-201ENST00000604535 1551 ntBASIC5.7□□□□□ -1.5
ITGA4P13612 USP9YP4-201ENST00000424401 1745 ntBASIC5.7□□□□□ -1.5
ITGA4P13612 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
ITGA4P13612 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
ITGA4P13612 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC5.7□□□□□ -1.5
ITGA4P13612 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
ITGA4P13612 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.7□□□□□ -1.5
ITGA4P13612 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
ITGA4P13612 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
ITGA4P13612 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.69□□□□□ -1.5
ITGA4P13612 MTND4P29-201ENST00000503122 1372 ntBASIC5.69□□□□□ -1.5
ITGA4P13612 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
ITGA4P13612 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
ITGA4P13612 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.69□□□□□ -1.5
ITGA4P13612 RNU6-289P-201ENST00000364093 107 ntBASIC5.69□□□□□ -1.5
ITGA4P13612 RNY4P34-201ENST00000364779 95 ntBASIC5.69□□□□□ -1.5
ITGA4P13612 OR1L6-202ENST00000373684 1044 ntBASIC5.69□□□□□ -1.5
ITGA4P13612 Y_RNA.402-201ENST00000383972 102 ntBASIC5.69□□□□□ -1.5
ITGA4P13612 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
ITGA4P13612 AL133270.1-201ENST00000402635 279 ntBASIC5.69□□□□□ -1.5
ITGA4P13612 Y_RNA.608-201ENST00000410647 95 ntBASIC5.69□□□□□ -1.5
ITGA4P13612 RPL12P9-201ENST00000412942 488 ntBASIC5.69□□□□□ -1.5
ITGA4P13612 ATP6V1G1P7-201ENST00000415853 349 ntBASIC5.69□□□□□ -1.5
ITGA4P13612 AC016831.2-201ENST00000417179 352 ntBASIC5.69□□□□□ -1.5
ITGA4P13612 AC004690.1-201ENST00000418216 328 ntBASIC5.69□□□□□ -1.5
ITGA4P13612 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC5.69□□□□□ -1.5
ITGA4P13612 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC5.69□□□□□ -1.5
ITGA4P13612 RPL19P16-201ENST00000433839 588 ntBASIC5.69□□□□□ -1.5
ITGA4P13612 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.69□□□□□ -1.5
ITGA4P13612 RPS29P10-201ENST00000439197 166 ntBASIC5.69□□□□□ -1.5
ITGA4P13612 RPS4XP4-201ENST00000443195 763 ntBASIC5.69□□□□□ -1.5
ITGA4P13612 AL161722.1-201ENST00000446972 1032 ntBASIC5.69□□□□□ -1.5
ITGA4P13612 RNU7-136P-201ENST00000458819 69 ntBASIC5.69□□□□□ -1.5
ITGA4P13612 RPS3AP14-201ENST00000483907 780 ntBASIC5.69□□□□□ -1.5
ITGA4P13612 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.69□□□□□ -1.5
ITGA4P13612 AC016559.2-201ENST00000510759 359 ntBASIC5.69□□□□□ -1.5
ITGA4P13612 AC004980.4-201ENST00000513375 203 ntBASIC5.69□□□□□ -1.5
ITGA4P13612 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC5.69□□□□□ -1.5
ITGA4P13612 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.69□□□□□ -1.5
ITGA4P13612 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC5.69□□□□□ -1.5
ITGA4P13612 AP001893.2-201ENST00000526949 202 ntBASIC5.69□□□□□ -1.5
ITGA4P13612 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC5.69□□□□□ -1.5
ITGA4P13612 MTCYBP13-201ENST00000578634 1093 ntBASIC5.69□□□□□ -1.5
ITGA4P13612 SNORD39.3-201ENST00000584451 71 ntBASIC5.69□□□□□ -1.5
ITGA4P13612 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC5.69□□□□□ -1.5
ITGA4P13612 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.69□□□□□ -1.5
ITGA4P13612 BCRP9-201ENST00000605312 388 ntBASIC5.69□□□□□ -1.5
ITGA4P13612 AC008945.2-201ENST00000606056 604 ntBASIC5.69□□□□□ -1.5
ITGA4P13612 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC5.69□□□□□ -1.5
ITGA4P13612 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
ITGA4P13612 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.69□□□□□ -1.5
ITGA4P13612 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
ITGA4P13612 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.69□□□□□ -1.5
ITGA4P13612 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
ITGA4P13612 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC5.69□□□□□ -1.5
ITGA4P13612 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
ITGA4P13612 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC5.68□□□□□ -1.5
ITGA4P13612 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC5.68□□□□□ -1.5
ITGA4P13612 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.68□□□□□ -1.5
ITGA4P13612 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.68□□□□□ -1.5
ITGA4P13612 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
ITGA4P13612 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
ITGA4P13612 FARSBP1-201ENST00000435808 1778 ntBASIC5.68□□□□□ -1.5
ITGA4P13612 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
ITGA4P13612 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
ITGA4P13612 RNU6-984P-201ENST00000363236 109 ntBASIC5.68□□□□□ -1.5
ITGA4P13612 RNU6-1090P-201ENST00000364065 94 ntBASIC5.68□□□□□ -1.5
ITGA4P13612 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
ITGA4P13612 RNU6-761P-201ENST00000384148 107 ntBASIC5.68□□□□□ -1.5
ITGA4P13612 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC5.68□□□□□ -1.5
ITGA4P13612 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
ITGA4P13612 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.68□□□□□ -1.5
ITGA4P13612 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.68□□□□□ -1.5
ITGA4P13612 RN7SKP266-201ENST00000410232 287 ntBASIC5.68□□□□□ -1.5
ITGA4P13612 RNU4-55P-201ENST00000410731 137 ntBASIC5.68□□□□□ -1.5
ITGA4P13612 PRELID3BP11-201ENST00000414230 479 ntBASIC5.68□□□□□ -1.5
ITGA4P13612 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC5.68□□□□□ -1.5
ITGA4P13612 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC5.68□□□□□ -1.5
ITGA4P13612 AC008280.1-201ENST00000418851 412 ntBASIC5.68□□□□□ -1.5
ITGA4P13612 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
ITGA4P13612 EI24P4-201ENST00000423683 1078 ntBASIC5.68□□□□□ -1.5
ITGA4P13612 RBMY2QP-201ENST00000429799 1147 ntBASIC5.68□□□□□ -1.5
ITGA4P13612 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC5.68□□□□□ -1.5
ITGA4P13612 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 123.7 ms