Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 SNORA71.1-201ENST00000364523 117 ntBASIC3.62□□□□□ -1.83
COL11A1P12107 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC3.62□□□□□ -1.83
COL11A1P12107 AC105918.1-201ENST00000474399 838 ntBASIC3.62□□□□□ -1.83
COL11A1P12107 AC020893.1-201ENST00000502452 580 ntBASIC3.62□□□□□ -1.83
COL11A1P12107 AC010374.2-201ENST00000512933 535 ntBASIC3.62□□□□□ -1.83
COL11A1P12107 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC3.62□□□□□ -1.83
COL11A1P12107 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.62□□□□□ -1.83
COL11A1P12107 AC141257.3-201ENST00000572906 215 ntBASIC3.62□□□□□ -1.83
COL11A1P12107 AL451007.1-201ENST00000595491 289 ntBASIC3.62□□□□□ -1.83
COL11A1P12107 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.62□□□□□ -1.83
COL11A1P12107 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.62□□□□□ -1.83
COL11A1P12107 HSPA8P1-201ENST00000425843 1833 ntBASIC3.62□□□□□ -1.83
COL11A1P12107 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
COL11A1P12107 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
COL11A1P12107 LINC01355-201ENST00000566551 5444 ntBASIC3.61□□□□□ -1.83
COL11A1P12107 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.61□□□□□ -1.83
COL11A1P12107 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
COL11A1P12107 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
COL11A1P12107 AP002088.1-201ENST00000382740 395 ntBASIC3.61□□□□□ -1.83
COL11A1P12107 COTL1P1-201ENST00000422309 375 ntBASIC3.61□□□□□ -1.83
COL11A1P12107 AC008065.1-201ENST00000428525 348 ntBASIC3.61□□□□□ -1.83
COL11A1P12107 MTND6P5-201ENST00000448266 512 ntBASIC3.61□□□□□ -1.83
COL11A1P12107 KC877373.1-201ENST00000479066 408 ntBASIC3.61□□□□□ -1.83
COL11A1P12107 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
COL11A1P12107 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.61□□□□□ -1.83
COL11A1P12107 AC015871.2-201ENST00000603605 948 ntBASIC3.61□□□□□ -1.83
COL11A1P12107 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC3.61□□□□□ -1.83
COL11A1P12107 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.61□□□□□ -1.83
COL11A1P12107 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
COL11A1P12107 OR5AQ1P-203ENST00000641818 1529 ntBASIC3.61□□□□□ -1.83
COL11A1P12107 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.61□□□□□ -1.83
COL11A1P12107 AC116158.1-201ENST00000560231 2129 ntBASIC3.61□□□□□ -1.83
COL11A1P12107 OR4G1P-202ENST00000641173 1788 ntBASIC3.61□□□□□ -1.83
COL11A1P12107 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
COL11A1P12107 RNU4-44P-201ENST00000363050 141 ntBASIC3.6□□□□□ -1.83
COL11A1P12107 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC3.6□□□□□ -1.83
COL11A1P12107 AL138885.1-201ENST00000405921 675 ntBASIC3.6□□□□□ -1.83
COL11A1P12107 HMGB3P18-201ENST00000406327 590 ntBASIC3.6□□□□□ -1.83
COL11A1P12107 OFD1P11Y-201ENST00000418213 1177 ntBASIC3.6□□□□□ -1.83
COL11A1P12107 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.6□□□□□ -1.83
COL11A1P12107 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.6□□□□□ -1.83
COL11A1P12107 AC107083.1-201ENST00000439643 279 ntBASIC3.6□□□□□ -1.83
COL11A1P12107 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.6□□□□□ -1.83
COL11A1P12107 CCRL1P1-201ENST00000449542 1053 ntBASIC3.6□□□□□ -1.83
COL11A1P12107 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.6□□□□□ -1.83
COL11A1P12107 AL136097.1-201ENST00000456945 913 ntBASIC3.6□□□□□ -1.83
COL11A1P12107 ALDH7A1P3-201ENST00000492517 345 ntBASIC3.6□□□□□ -1.83
COL11A1P12107 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC3.6□□□□□ -1.83
COL11A1P12107 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC3.6□□□□□ -1.83
COL11A1P12107 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC3.6□□□□□ -1.83
COL11A1P12107 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC3.6□□□□□ -1.83
COL11A1P12107 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.6□□□□□ -1.83
COL11A1P12107 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.6□□□□□ -1.83
COL11A1P12107 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
COL11A1P12107 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.6□□□□□ -1.83
COL11A1P12107 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.6□□□□□ -1.83
COL11A1P12107 AL672296.1-201ENST00000427780 2158 ntBASIC3.6□□□□□ -1.83
COL11A1P12107 AL031985.3-201ENST00000565390 2449 ntBASIC3.6□□□□□ -1.83
COL11A1P12107 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
COL11A1P12107 RNU6-7-201ENST00000364784 107 ntBASIC3.6□□□□□ -1.83
COL11A1P12107 RNU6-8-201ENST00000365467 107 ntBASIC3.6□□□□□ -1.83
COL11A1P12107 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
COL11A1P12107 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
COL11A1P12107 AC112492.1-201ENST00000449607 712 ntBASIC3.6□□□□□ -1.83
COL11A1P12107 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC3.6□□□□□ -1.83
COL11A1P12107 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.6□□□□□ -1.83
COL11A1P12107 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC3.6□□□□□ -1.83
COL11A1P12107 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.6□□□□□ -1.83
COL11A1P12107 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.6□□□□□ -1.83
COL11A1P12107 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC3.6□□□□□ -1.83
COL11A1P12107 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.6□□□□□ -1.83
COL11A1P12107 uc_338.32-201ENST00000615087 172 ntBASIC3.6□□□□□ -1.83
COL11A1P12107 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.6□□□□□ -1.83
COL11A1P12107 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
COL11A1P12107 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
COL11A1P12107 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC3.6□□□□□ -1.83
COL11A1P12107 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
COL11A1P12107 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
COL11A1P12107 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.59□□□□□ -1.83
COL11A1P12107 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
COL11A1P12107 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
COL11A1P12107 SNORA18.3-201ENST00000384122 132 ntBASIC3.59□□□□□ -1.83
COL11A1P12107 AC093719.1-202ENST00000392735 373 ntBASIC3.59□□□□□ -1.83
COL11A1P12107 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.59□□□□□ -1.83
COL11A1P12107 RPS4XP22-201ENST00000480755 780 ntBASIC3.59□□□□□ -1.83
COL11A1P12107 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.59□□□□□ -1.83
COL11A1P12107 OR2A20P-203ENST00000498397 1268 ntBASIC3.59□□□□□ -1.83
COL11A1P12107 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.59□□□□□ -1.83
COL11A1P12107 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.59□□□□□ -1.83
COL11A1P12107 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
COL11A1P12107 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC3.59□□□□□ -1.83
COL11A1P12107 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
COL11A1P12107 AC018529.3-201ENST00000624212 2254 ntBASIC3.59□□□□□ -1.83
COL11A1P12107 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.59□□□□□ -1.83
COL11A1P12107 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.59□□□□□ -1.84
COL11A1P12107 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.59□□□□□ -1.84
COL11A1P12107 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
COL11A1P12107 ZNF90P1-201ENST00000480493 1951 ntBASIC3.59□□□□□ -1.84
COL11A1P12107 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC3.59□□□□□ -1.84
COL11A1P12107 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms