Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
MMP3P08254 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
MMP3P08254 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
MMP3P08254 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
MMP3P08254 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
MMP3P08254 RNU6-225P-201ENST00000384613 103 ntBASIC4.61□□□□□ -1.67
MMP3P08254 RBMY1KP-201ENST00000423480 476 ntBASIC4.61□□□□□ -1.67
MMP3P08254 AL691449.1-201ENST00000426570 421 ntBASIC4.61□□□□□ -1.67
MMP3P08254 COX7BP2-201ENST00000437976 242 ntBASIC4.61□□□□□ -1.67
MMP3P08254 YWHAQP9-201ENST00000445891 512 ntBASIC4.61□□□□□ -1.67
MMP3P08254 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC4.61□□□□□ -1.67
MMP3P08254 AL358232.1-201ENST00000448030 501 ntBASIC4.61□□□□□ -1.67
MMP3P08254 ART2BP-201ENST00000453501 499 ntBASIC4.61□□□□□ -1.67
MMP3P08254 AL122001.1-201ENST00000457027 370 ntBASIC4.61□□□□□ -1.67
MMP3P08254 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC4.61□□□□□ -1.67
MMP3P08254 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.61□□□□□ -1.67
MMP3P08254 AC110792.1-201ENST00000491826 472 ntBASIC4.61□□□□□ -1.67
MMP3P08254 AC108145.1-201ENST00000503770 153 ntBASIC4.61□□□□□ -1.67
MMP3P08254 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC4.61□□□□□ -1.67
MMP3P08254 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
MMP3P08254 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC4.61□□□□□ -1.67
MMP3P08254 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.61□□□□□ -1.67
MMP3P08254 AC107918.3-201ENST00000533272 382 ntBASIC4.61□□□□□ -1.67
MMP3P08254 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC4.61□□□□□ -1.67
MMP3P08254 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC4.61□□□□□ -1.67
MMP3P08254 AC090695.1-201ENST00000561269 1222 ntBASIC4.61□□□□□ -1.67
MMP3P08254 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
MMP3P08254 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC4.61□□□□□ -1.67
MMP3P08254 AC107075.1-201ENST00000613695 314 ntBASIC4.61□□□□□ -1.67
MMP3P08254 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
MMP3P08254 AC131159.1-201ENST00000621854 213 ntBASIC4.61□□□□□ -1.67
MMP3P08254 AC140113.4-201ENST00000622087 222 ntBASIC4.61□□□□□ -1.67
MMP3P08254 AC078883.4-201ENST00000623218 367 ntBASIC4.61□□□□□ -1.67
MMP3P08254 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.61□□□□□ -1.67
MMP3P08254 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.61□□□□□ -1.67
MMP3P08254 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
MMP3P08254 DCAF13P3-201ENST00000561147 1334 ntBASIC4.61□□□□□ -1.67
MMP3P08254 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.61□□□□□ -1.67
MMP3P08254 MTCO1P6-201ENST00000481192 1384 ntBASIC4.61□□□□□ -1.67
MMP3P08254 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
MMP3P08254 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
MMP3P08254 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.61□□□□□ -1.67
MMP3P08254 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
MMP3P08254 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
MMP3P08254 DDX18P3-201ENST00000404856 2007 ntBASIC4.6□□□□□ -1.67
MMP3P08254 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
MMP3P08254 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.6□□□□□ -1.67
MMP3P08254 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
MMP3P08254 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
MMP3P08254 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
MMP3P08254 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
MMP3P08254 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
MMP3P08254 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
MMP3P08254 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
MMP3P08254 CGA-201ENST00000369582 729 ntTSL 5 BASIC4.6□□□□□ -1.67
MMP3P08254 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
MMP3P08254 RNU6-317P-201ENST00000384031 107 ntBASIC4.6□□□□□ -1.67
MMP3P08254 AC093719.1-202ENST00000392735 373 ntBASIC4.6□□□□□ -1.67
MMP3P08254 PTMAP2-201ENST00000397627 327 ntBASIC4.6□□□□□ -1.67
MMP3P08254 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.6□□□□□ -1.67
MMP3P08254 CYP4F29P-201ENST00000420685 446 ntBASIC4.6□□□□□ -1.67
MMP3P08254 AL365338.1-201ENST00000422282 858 ntBASIC4.6□□□□□ -1.67
MMP3P08254 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
MMP3P08254 AL445584.1-201ENST00000431451 330 ntBASIC4.6□□□□□ -1.67
MMP3P08254 AC007389.2-201ENST00000434630 306 ntBASIC4.6□□□□□ -1.67
MMP3P08254 UBE2V1P5-201ENST00000440070 405 ntBASIC4.6□□□□□ -1.67
MMP3P08254 RPL23AP76-201ENST00000441860 458 ntBASIC4.6□□□□□ -1.67
MMP3P08254 RPS4XP4-201ENST00000443195 763 ntBASIC4.6□□□□□ -1.67
MMP3P08254 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.6□□□□□ -1.67
MMP3P08254 EXTL2P1-201ENST00000446218 416 ntBASIC4.6□□□□□ -1.67
MMP3P08254 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.6□□□□□ -1.67
MMP3P08254 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC4.6□□□□□ -1.67
MMP3P08254 RPL7P1-201ENST00000468161 747 ntBASIC4.6□□□□□ -1.67
MMP3P08254 RPL7P9-201ENST00000468715 747 ntBASIC4.6□□□□□ -1.67
MMP3P08254 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.6□□□□□ -1.67
MMP3P08254 AC118465.1-201ENST00000513820 1271 ntBASIC4.6□□□□□ -1.67
MMP3P08254 FABP5P12-201ENST00000515543 389 ntBASIC4.6□□□□□ -1.67
MMP3P08254 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.6□□□□□ -1.67
MMP3P08254 AC091515.1-201ENST00000548110 679 ntBASIC4.6□□□□□ -1.67
MMP3P08254 HSPE1P5-201ENST00000561489 272 ntBASIC4.6□□□□□ -1.67
MMP3P08254 AL132657.2-201ENST00000564417 358 ntBASIC4.6□□□□□ -1.67
MMP3P08254 AC120057.2-201ENST00000571520 271 ntBASIC4.6□□□□□ -1.67
MMP3P08254 AL354943.1-201ENST00000572103 781 ntBASIC4.6□□□□□ -1.67
MMP3P08254 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC4.6□□□□□ -1.67
MMP3P08254 AC021749.1-201ENST00000604322 607 ntBASIC4.6□□□□□ -1.67
MMP3P08254 AL008729.2-201ENST00000606393 473 ntBASIC4.6□□□□□ -1.67
MMP3P08254 AC092608.3-201ENST00000625017 386 ntBASIC4.6□□□□□ -1.67
MMP3P08254 AC087821.2-201ENST00000637086 450 ntBASIC4.6□□□□□ -1.67
MMP3P08254 MFSD8-245ENST00000641743 948 ntBASIC4.6□□□□□ -1.67
MMP3P08254 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.6□□□□□ -1.67
MMP3P08254 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
MMP3P08254 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
MMP3P08254 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.6□□□□□ -1.67
MMP3P08254 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.6□□□□□ -1.67
MMP3P08254 AP005901.5-201ENST00000545779 1796 ntBASIC4.6□□□□□ -1.67
MMP3P08254 BX005019.1-201ENST00000561881 1810 ntBASIC4.6□□□□□ -1.67
MMP3P08254 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
MMP3P08254 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
MMP3P08254 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
MMP3P08254 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms