Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
APOBP04114 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC1.95□□□□□ -2.1
APOBP04114 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
APOBP04114 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
APOBP04114 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC1.95□□□□□ -2.1
APOBP04114 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
APOBP04114 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC1.95□□□□□ -2.1
APOBP04114 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
APOBP04114 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
APOBP04114 RAD21-204ENST00000518055 896 ntTSL 2 BASIC1.95□□□□□ -2.1
APOBP04114 AP000926.4-201ENST00000527351 454 ntBASIC1.95□□□□□ -2.1
APOBP04114 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC1.95□□□□□ -2.1
APOBP04114 MIR4435-1-201ENST00000582552 80 ntBASIC1.95□□□□□ -2.1
APOBP04114 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC1.95□□□□□ -2.1
APOBP04114 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC1.95□□□□□ -2.1
APOBP04114 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
APOBP04114 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
APOBP04114 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC1.95□□□□□ -2.1
APOBP04114 RPL30P2-201ENST00000414021 291 ntBASIC1.95□□□□□ -2.1
APOBP04114 AL513477.1-202ENST00000417061 214 ntBASIC1.95□□□□□ -2.1
APOBP04114 RPL7P12-201ENST00000446719 750 ntBASIC1.95□□□□□ -2.1
APOBP04114 RN7SL594P-201ENST00000470590 287 ntBASIC1.95□□□□□ -2.1
APOBP04114 RPS3AP50-201ENST00000487064 803 ntBASIC1.95□□□□□ -2.1
APOBP04114 BTF3L4P4-201ENST00000506381 449 ntBASIC1.95□□□□□ -2.1
APOBP04114 AC008549.1-201ENST00000512900 643 ntBASIC1.95□□□□□ -2.1
APOBP04114 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC1.95□□□□□ -2.1
APOBP04114 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC1.95□□□□□ -2.1
APOBP04114 OR7A8P-201ENST00000595427 913 ntBASIC1.95□□□□□ -2.1
APOBP04114 ATM-230ENST00000640388 578 ntTSL 5 BASIC1.95□□□□□ -2.1
APOBP04114 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
APOBP04114 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC1.95□□□□□ -2.1
APOBP04114 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
APOBP04114 AL160275.2-201ENST00000412010 394 ntBASIC1.95□□□□□ -2.1
APOBP04114 CST9LP2-201ENST00000437612 320 ntBASIC1.95□□□□□ -2.1
APOBP04114 RN7SKP209-201ENST00000516888 304 ntBASIC1.95□□□□□ -2.1
APOBP04114 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC1.95□□□□□ -2.1
APOBP04114 AC106785.3-201ENST00000564064 847 ntBASIC1.95□□□□□ -2.1
APOBP04114 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.95□□□□□ -2.1
APOBP04114 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC1.95□□□□□ -2.1
APOBP04114 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
APOBP04114 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC1.94□□□□□ -2.1
APOBP04114 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC1.94□□□□□ -2.1
APOBP04114 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
APOBP04114 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
APOBP04114 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC1.94□□□□□ -2.1
APOBP04114 AC018555.1-201ENST00000567548 1980 ntBASIC1.94□□□□□ -2.1
APOBP04114 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
APOBP04114 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
APOBP04114 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC1.94□□□□□ -2.1
APOBP04114 SEPT7P2-202ENST00000398921 823 ntBASIC1.94□□□□□ -2.1
APOBP04114 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC1.94□□□□□ -2.1
APOBP04114 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC1.94□□□□□ -2.1
APOBP04114 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC1.94□□□□□ -2.1
APOBP04114 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC1.94□□□□□ -2.1
APOBP04114 AC017037.2-201ENST00000513850 890 ntBASIC1.94□□□□□ -2.1
APOBP04114 AC034159.1-201ENST00000513885 583 ntBASIC1.94□□□□□ -2.1
APOBP04114 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC1.94□□□□□ -2.1
APOBP04114 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC1.94□□□□□ -2.1
APOBP04114 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC1.94□□□□□ -2.1
APOBP04114 AP005262.1-201ENST00000582646 997 ntBASIC1.94□□□□□ -2.1
APOBP04114 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
APOBP04114 FAM35DP-201ENST00000323387 2712 ntBASIC1.94□□□□□ -2.1
APOBP04114 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
APOBP04114 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
APOBP04114 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC1.94□□□□□ -2.1
APOBP04114 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
APOBP04114 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
APOBP04114 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC1.94□□□□□ -2.1
APOBP04114 AC005229.2-201ENST00000456995 399 ntBASIC1.94□□□□□ -2.1
APOBP04114 SNORA70.19-201ENST00000516717 90 ntBASIC1.94□□□□□ -2.1
APOBP04114 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC1.94□□□□□ -2.1
APOBP04114 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC1.94□□□□□ -2.1
APOBP04114 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
APOBP04114 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC1.94□□□□□ -2.1
APOBP04114 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
APOBP04114 ASNSP1-201ENST00000518311 1939 ntBASIC1.94□□□□□ -2.1
APOBP04114 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
APOBP04114 AC019072.1-201ENST00000604535 1551 ntBASIC1.94□□□□□ -2.1
APOBP04114 ANKRD36BP1-201ENST00000358576 1779 ntBASIC1.94□□□□□ -2.1
APOBP04114 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC1.94□□□□□ -2.1
APOBP04114 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC1.94□□□□□ -2.1
APOBP04114 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
APOBP04114 HLFP1-201ENST00000402375 499 ntBASIC1.94□□□□□ -2.1
APOBP04114 RN7SKP220-201ENST00000410611 288 ntBASIC1.94□□□□□ -2.1
APOBP04114 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.94□□□□□ -2.1
APOBP04114 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC1.94□□□□□ -2.1
APOBP04114 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC1.94□□□□□ -2.1
APOBP04114 NPM1P39-201ENST00000449818 867 ntBASIC1.94□□□□□ -2.1
APOBP04114 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC1.94□□□□□ -2.1
APOBP04114 AL583832.1-201ENST00000603227 784 ntBASIC1.94□□□□□ -2.1
APOBP04114 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC1.94□□□□□ -2.1
APOBP04114 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
APOBP04114 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
APOBP04114 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC1.94□□□□□ -2.1
APOBP04114 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC1.94□□□□□ -2.1
APOBP04114 AL031595.2-201ENST00000624215 19071 ntBASIC1.94□□□□□ -2.1
APOBP04114 PHLPP2-201ENST00000393524 8467 ntTSL 2 BASIC1.94□□□□□ -2.1
APOBP04114 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC1.93□□□□□ -2.1
APOBP04114 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
APOBP04114 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 159 ms