Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 AC009237.10-201ENST00000414112 510 ntBASIC4.14□□□□□ -1.75
NKX2-2O95096 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.14□□□□□ -1.75
NKX2-2O95096 CYCSP10-201ENST00000417973 294 ntBASIC4.14□□□□□ -1.75
NKX2-2O95096 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC4.14□□□□□ -1.75
NKX2-2O95096 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC4.14□□□□□ -1.75
NKX2-2O95096 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.14□□□□□ -1.75
NKX2-2O95096 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC4.14□□□□□ -1.75
NKX2-2O95096 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
NKX2-2O95096 RPS25P9-201ENST00000435591 252 ntBASIC4.14□□□□□ -1.75
NKX2-2O95096 AC011753.3-201ENST00000443436 406 ntBASIC4.14□□□□□ -1.75
NKX2-2O95096 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC4.14□□□□□ -1.75
NKX2-2O95096 RSL24D1P3-201ENST00000449255 495 ntBASIC4.14□□□□□ -1.75
NKX2-2O95096 AC104978.1-201ENST00000449387 391 ntBASIC4.14□□□□□ -1.75
NKX2-2O95096 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.14□□□□□ -1.75
NKX2-2O95096 AC012158.1-204ENST00000483430 465 ntBASIC4.14□□□□□ -1.75
NKX2-2O95096 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.14□□□□□ -1.75
NKX2-2O95096 OR4G11P-201ENST00000492842 939 ntBASIC4.14□□□□□ -1.75
NKX2-2O95096 AC008897.1-201ENST00000494006 347 ntBASIC4.14□□□□□ -1.75
NKX2-2O95096 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.14□□□□□ -1.75
NKX2-2O95096 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.14□□□□□ -1.75
NKX2-2O95096 RNU6-1129P-201ENST00000515964 104 ntBASIC4.14□□□□□ -1.75
NKX2-2O95096 MTND2P38-201ENST00000522536 667 ntBASIC4.14□□□□□ -1.75
NKX2-2O95096 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC4.14□□□□□ -1.75
NKX2-2O95096 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.14□□□□□ -1.75
NKX2-2O95096 AP001636.2-201ENST00000525517 696 ntBASIC4.14□□□□□ -1.75
NKX2-2O95096 OR5BC1P-201ENST00000529327 739 ntBASIC4.14□□□□□ -1.75
NKX2-2O95096 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC4.14□□□□□ -1.75
NKX2-2O95096 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC4.14□□□□□ -1.75
NKX2-2O95096 AP001180.3-201ENST00000582221 145 ntBASIC4.14□□□□□ -1.75
NKX2-2O95096 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.14□□□□□ -1.75
NKX2-2O95096 AC103881.1-201ENST00000603476 538 ntBASIC4.14□□□□□ -1.75
NKX2-2O95096 AL031281.1-201ENST00000604049 488 ntBASIC4.14□□□□□ -1.75
NKX2-2O95096 AC115286.1-201ENST00000604298 434 ntBASIC4.14□□□□□ -1.75
NKX2-2O95096 AC025811.1-201ENST00000604312 472 ntBASIC4.14□□□□□ -1.75
NKX2-2O95096 AC112220.3-201ENST00000605502 502 ntBASIC4.14□□□□□ -1.75
NKX2-2O95096 AC091979.2-201ENST00000607514 214 ntBASIC4.14□□□□□ -1.75
NKX2-2O95096 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC4.14□□□□□ -1.75
NKX2-2O95096 AC092650.2-201ENST00000619984 902 ntBASIC4.14□□□□□ -1.75
NKX2-2O95096 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC4.14□□□□□ -1.75
NKX2-2O95096 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC4.14□□□□□ -1.75
NKX2-2O95096 AC006065.6-201ENST00000625201 545 ntBASIC4.14□□□□□ -1.75
NKX2-2O95096 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC4.14□□□□□ -1.75
NKX2-2O95096 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
NKX2-2O95096 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.14□□□□□ -1.75
NKX2-2O95096 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
NKX2-2O95096 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.14□□□□□ -1.75
NKX2-2O95096 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
NKX2-2O95096 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.14□□□□□ -1.75
NKX2-2O95096 OR56B2P-202ENST00000641377 2453 ntBASIC4.14□□□□□ -1.75
NKX2-2O95096 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.14□□□□□ -1.75
NKX2-2O95096 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.14□□□□□ -1.75
NKX2-2O95096 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
NKX2-2O95096 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
NKX2-2O95096 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
NKX2-2O95096 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
NKX2-2O95096 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
NKX2-2O95096 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
NKX2-2O95096 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
NKX2-2O95096 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.13□□□□□ -1.75
NKX2-2O95096 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
NKX2-2O95096 RNU6-931P-201ENST00000363850 107 ntBASIC4.13□□□□□ -1.75
NKX2-2O95096 RNA5SP22-201ENST00000365393 109 ntBASIC4.13□□□□□ -1.75
NKX2-2O95096 CD2-201ENST00000369477 478 ntTSL 2 BASIC4.13□□□□□ -1.75
NKX2-2O95096 RNU6-1122P-201ENST00000384449 107 ntBASIC4.13□□□□□ -1.75
NKX2-2O95096 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC4.13□□□□□ -1.75
NKX2-2O95096 RN7SKP199-201ENST00000410325 305 ntBASIC4.13□□□□□ -1.75
NKX2-2O95096 RN7SKP167-201ENST00000411047 285 ntBASIC4.13□□□□□ -1.75
NKX2-2O95096 UBTFL3-201ENST00000418934 1024 ntBASIC4.13□□□□□ -1.75
NKX2-2O95096 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC4.13□□□□□ -1.75
NKX2-2O95096 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.13□□□□□ -1.75
NKX2-2O95096 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC4.13□□□□□ -1.75
NKX2-2O95096 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.13□□□□□ -1.75
NKX2-2O95096 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
NKX2-2O95096 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.13□□□□□ -1.75
NKX2-2O95096 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.13□□□□□ -1.75
NKX2-2O95096 VN1R10P-201ENST00000447106 875 ntBASIC4.13□□□□□ -1.75
NKX2-2O95096 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.13□□□□□ -1.75
NKX2-2O95096 TRGVB-201ENST00000453257 471 ntBASIC4.13□□□□□ -1.75
NKX2-2O95096 AC005008.1-201ENST00000456151 612 ntBASIC4.13□□□□□ -1.75
NKX2-2O95096 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.13□□□□□ -1.75
NKX2-2O95096 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC4.13□□□□□ -1.75
NKX2-2O95096 AC092757.1-201ENST00000467293 467 ntBASIC4.13□□□□□ -1.75
NKX2-2O95096 UBTFL6-201ENST00000477929 1024 ntBASIC4.13□□□□□ -1.75
NKX2-2O95096 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.13□□□□□ -1.75
NKX2-2O95096 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.13□□□□□ -1.75
NKX2-2O95096 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.13□□□□□ -1.75
NKX2-2O95096 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.13□□□□□ -1.75
NKX2-2O95096 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC4.13□□□□□ -1.75
NKX2-2O95096 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC4.13□□□□□ -1.75
NKX2-2O95096 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.13□□□□□ -1.75
NKX2-2O95096 RNY4P37-201ENST00000516225 96 ntBASIC4.13□□□□□ -1.75
NKX2-2O95096 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.13□□□□□ -1.75
NKX2-2O95096 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.13□□□□□ -1.75
NKX2-2O95096 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC4.13□□□□□ -1.75
NKX2-2O95096 AC008127.2-201ENST00000549925 1075 ntBASIC4.13□□□□□ -1.75
NKX2-2O95096 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC4.13□□□□□ -1.75
NKX2-2O95096 AC084783.1-201ENST00000565846 910 ntBASIC4.13□□□□□ -1.75
NKX2-2O95096 RPL23AP97-201ENST00000568955 471 ntBASIC4.13□□□□□ -1.75
NKX2-2O95096 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC4.13□□□□□ -1.75
NKX2-2O95096 AL353778.1-201ENST00000603149 408 ntBASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms