Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 AL078604.1-201ENST00000404609 466 ntBASIC7.11□□□□□ -1.27
RNF40O75150 AL133260.1-201ENST00000405720 405 ntBASIC7.11□□□□□ -1.27
RNF40O75150 RNU2-14P-201ENST00000411053 191 ntBASIC7.11□□□□□ -1.27
RNF40O75150 AC008280.1-201ENST00000418851 412 ntBASIC7.11□□□□□ -1.27
RNF40O75150 RBMY1KP-201ENST00000423480 476 ntBASIC7.11□□□□□ -1.27
RNF40O75150 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC7.11□□□□□ -1.27
RNF40O75150 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC7.11□□□□□ -1.27
RNF40O75150 FTH1P25-201ENST00000447665 469 ntBASIC7.11□□□□□ -1.27
RNF40O75150 AL133351.3-201ENST00000454998 193 ntBASIC7.11□□□□□ -1.27
RNF40O75150 RPS3AP41-201ENST00000462701 778 ntBASIC7.11□□□□□ -1.27
RNF40O75150 RN7SL561P-201ENST00000488553 281 ntBASIC7.11□□□□□ -1.27
RNF40O75150 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC7.11□□□□□ -1.27
RNF40O75150 RNU6-189P-201ENST00000516120 101 ntBASIC7.11□□□□□ -1.27
RNF40O75150 SCARNA16.2-201ENST00000516520 172 ntBASIC7.11□□□□□ -1.27
RNF40O75150 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
RNF40O75150 DEFB109D-201ENST00000529497 240 ntBASIC7.11□□□□□ -1.27
RNF40O75150 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
RNF40O75150 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC7.11□□□□□ -1.27
RNF40O75150 HSPE1P2-201ENST00000554777 306 ntBASIC7.11□□□□□ -1.27
RNF40O75150 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC7.11□□□□□ -1.27
RNF40O75150 AC022884.3-201ENST00000579571 248 ntBASIC7.11□□□□□ -1.27
RNF40O75150 MIR548AI-201ENST00000579940 88 ntBASIC7.11□□□□□ -1.27
RNF40O75150 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC7.11□□□□□ -1.27
RNF40O75150 AC011477.5-201ENST00000586571 259 ntBASIC7.11□□□□□ -1.27
RNF40O75150 MRO-208ENST00000588444 866 ntTSL 3 BASIC7.11□□□□□ -1.27
RNF40O75150 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC7.11□□□□□ -1.27
RNF40O75150 LAPTM4BP2-201ENST00000604542 446 ntBASIC7.11□□□□□ -1.27
RNF40O75150 AL031666.3-201ENST00000609320 1006 ntBASIC7.11□□□□□ -1.27
RNF40O75150 AL352984.2-202ENST00000613699 155 ntBASIC7.11□□□□□ -1.27
RNF40O75150 MIR7109-201ENST00000613748 65 ntBASIC7.11□□□□□ -1.27
RNF40O75150 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
RNF40O75150 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC7.11□□□□□ -1.27
RNF40O75150 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC7.11□□□□□ -1.27
RNF40O75150 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
RNF40O75150 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
RNF40O75150 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
RNF40O75150 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
RNF40O75150 AC244517.1-201ENST00000606030 2086 ntBASIC7.1□□□□□ -1.27
RNF40O75150 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
RNF40O75150 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
RNF40O75150 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
RNF40O75150 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
RNF40O75150 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
RNF40O75150 OR56A5-201ENST00000340110 738 ntBASIC7.1□□□□□ -1.27
RNF40O75150 RNA5SP308-201ENST00000362532 115 ntBASIC7.1□□□□□ -1.27
RNF40O75150 Y_RNA.39-201ENST00000362620 98 ntBASIC7.1□□□□□ -1.27
RNF40O75150 RNU6-1017P-201ENST00000363613 106 ntBASIC7.1□□□□□ -1.27
RNF40O75150 Y_RNA.270-201ENST00000364693 104 ntBASIC7.1□□□□□ -1.27
RNF40O75150 PPIAP26-201ENST00000377951 522 ntBASIC7.1□□□□□ -1.27
RNF40O75150 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC7.1□□□□□ -1.27
RNF40O75150 RN7SKP235-201ENST00000410662 305 ntBASIC7.1□□□□□ -1.27
RNF40O75150 AC011933.1-201ENST00000413334 321 ntBASIC7.1□□□□□ -1.27
RNF40O75150 RPSAP35-201ENST00000413753 818 ntBASIC7.1□□□□□ -1.27
RNF40O75150 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC7.1□□□□□ -1.27
RNF40O75150 AC068533.1-201ENST00000418542 415 ntBASIC7.1□□□□□ -1.27
RNF40O75150 THEM7P-201ENST00000419556 672 ntBASIC7.1□□□□□ -1.27
RNF40O75150 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC7.1□□□□□ -1.27
RNF40O75150 NMD3P2-201ENST00000421815 761 ntBASIC7.1□□□□□ -1.27
RNF40O75150 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC7.1□□□□□ -1.27
RNF40O75150 USMG5P1-201ENST00000425964 177 ntBASIC7.1□□□□□ -1.27
RNF40O75150 AC115283.1-201ENST00000427353 400 ntBASIC7.1□□□□□ -1.27
RNF40O75150 RPL23AP74-201ENST00000437246 471 ntBASIC7.1□□□□□ -1.27
RNF40O75150 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC7.1□□□□□ -1.27
RNF40O75150 AL121578.2-201ENST00000448797 447 ntBASIC7.1□□□□□ -1.27
RNF40O75150 HMGB3P21-201ENST00000452483 547 ntBASIC7.1□□□□□ -1.27
RNF40O75150 AC079804.1-201ENST00000461922 436 ntBASIC7.1□□□□□ -1.27
RNF40O75150 SNORA58-201ENST00000505219 137 ntBASIC7.1□□□□□ -1.27
RNF40O75150 IGLVV-66-201ENST00000523818 341 ntBASIC7.1□□□□□ -1.27
RNF40O75150 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
RNF40O75150 HSPE1P20-201ENST00000538133 289 ntBASIC7.1□□□□□ -1.27
RNF40O75150 AC130289.1-201ENST00000577321 73 ntBASIC7.1□□□□□ -1.27
RNF40O75150 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC7.1□□□□□ -1.27
RNF40O75150 SNORD39.2-201ENST00000579995 76 ntBASIC7.1□□□□□ -1.27
RNF40O75150 AC068418.1-201ENST00000582990 404 ntTSL 3 BASIC7.1□□□□□ -1.27
RNF40O75150 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC7.1□□□□□ -1.27
RNF40O75150 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC7.1□□□□□ -1.27
RNF40O75150 WWOX-217ENST00000620008 450 ntTSL 2 BASIC7.1□□□□□ -1.27
RNF40O75150 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC7.1□□□□□ -1.27
RNF40O75150 AC068213.1-201ENST00000625124 226 ntBASIC7.1□□□□□ -1.27
RNF40O75150 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
RNF40O75150 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
RNF40O75150 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
RNF40O75150 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
RNF40O75150 LINC01252-201ENST00000499291 3673 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
RNF40O75150 SLMAP-202ENST00000295952 4420 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
RNF40O75150 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC7.1□□□□□ -1.27
RNF40O75150 NEMP2-202ENST00000409150 6168 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
RNF40O75150 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC7.1□□□□□ -1.27
RNF40O75150 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
RNF40O75150 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
RNF40O75150 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
RNF40O75150 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC7.1□□□□□ -1.27
RNF40O75150 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC7.1□□□□□ -1.27
RNF40O75150 LINC02547-201ENST00000531559 3308 ntTSL 2 BASIC7.09□□□□□ -1.27
RNF40O75150 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC7.09□□□□□ -1.27
RNF40O75150 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
RNF40O75150 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
RNF40O75150 DLD-204ENST00000437604 1859 ntTSL 2 BASIC7.09□□□□□ -1.27
RNF40O75150 Y_RNA.126-201ENST00000363382 111 ntBASIC7.09□□□□□ -1.27
RNF40O75150 RNU6-511P-201ENST00000363496 107 ntBASIC7.09□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms