Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 AF213884.1-201ENST00000488102 463 ntBASIC3.97□□□□□ -1.77
PRKNO60260 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC3.97□□□□□ -1.77
PRKNO60260 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC3.97□□□□□ -1.77
PRKNO60260 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC3.97□□□□□ -1.77
PRKNO60260 PARP4P3-201ENST00000510265 317 ntBASIC3.97□□□□□ -1.77
PRKNO60260 MTCO3P28-201ENST00000513351 515 ntBASIC3.97□□□□□ -1.77
PRKNO60260 AC008562.1-201ENST00000521763 330 ntBASIC3.97□□□□□ -1.77
PRKNO60260 OSBPL9P2-201ENST00000526582 1228 ntBASIC3.97□□□□□ -1.77
PRKNO60260 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC3.97□□□□□ -1.77
PRKNO60260 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC3.97□□□□□ -1.77
PRKNO60260 AP000619.3-201ENST00000535634 1127 ntBASIC3.97□□□□□ -1.77
PRKNO60260 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC3.97□□□□□ -1.77
PRKNO60260 AL442163.2-201ENST00000553912 710 ntBASIC3.97□□□□□ -1.77
PRKNO60260 HIGD1AP17-201ENST00000554576 276 ntBASIC3.97□□□□□ -1.77
PRKNO60260 PARP1P2-201ENST00000556806 195 ntBASIC3.97□□□□□ -1.77
PRKNO60260 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC3.97□□□□□ -1.77
PRKNO60260 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.97□□□□□ -1.77
PRKNO60260 CASC16-202ENST00000563844 610 ntTSL 3 BASIC3.97□□□□□ -1.77
PRKNO60260 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC3.97□□□□□ -1.77
PRKNO60260 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC3.97□□□□□ -1.77
PRKNO60260 AC136624.4-201ENST00000573044 370 ntBASIC3.97□□□□□ -1.77
PRKNO60260 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC3.97□□□□□ -1.77
PRKNO60260 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.97□□□□□ -1.77
PRKNO60260 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC3.97□□□□□ -1.77
PRKNO60260 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC3.97□□□□□ -1.77
PRKNO60260 SLC25A36P1-201ENST00000590111 465 ntBASIC3.97□□□□□ -1.77
PRKNO60260 BNIP3P26-201ENST00000600827 554 ntBASIC3.97□□□□□ -1.77
PRKNO60260 AL161729.3-201ENST00000603533 673 ntBASIC3.97□□□□□ -1.77
PRKNO60260 AL390816.3-201ENST00000604527 1066 ntBASIC3.97□□□□□ -1.77
PRKNO60260 AP003973.1-201ENST00000604639 691 ntBASIC3.97□□□□□ -1.77
PRKNO60260 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC3.97□□□□□ -1.77
PRKNO60260 AL451074.6-201ENST00000608512 729 ntBASIC3.97□□□□□ -1.77
PRKNO60260 VIS1.1-201ENST00000610517 203 ntBASIC3.97□□□□□ -1.77
PRKNO60260 AC090246.1-201ENST00000616499 426 ntBASIC3.97□□□□□ -1.77
PRKNO60260 AL138721.1-201ENST00000616756 179 ntBASIC3.97□□□□□ -1.77
PRKNO60260 AC121761.2-201ENST00000617300 689 ntBASIC3.97□□□□□ -1.77
PRKNO60260 AC009704.2-201ENST00000618739 483 ntBASIC3.97□□□□□ -1.77
PRKNO60260 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC3.97□□□□□ -1.77
PRKNO60260 AL023881.1-201ENST00000621088 301 ntBASIC3.97□□□□□ -1.77
PRKNO60260 AC116563.2-201ENST00000624751 535 ntBASIC3.97□□□□□ -1.77
PRKNO60260 CDRT1-208ENST00000630868 794 ntBASIC3.97□□□□□ -1.77
PRKNO60260 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.97□□□□□ -1.77
PRKNO60260 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC3.97□□□□□ -1.77
PRKNO60260 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
PRKNO60260 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC3.97□□□□□ -1.77
PRKNO60260 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC3.97□□□□□ -1.77
PRKNO60260 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
PRKNO60260 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
PRKNO60260 Z99496.1-201ENST00000469424 1477 ntBASIC3.97□□□□□ -1.77
PRKNO60260 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.97□□□□□ -1.77
PRKNO60260 AC009229.4-201ENST00000623854 1947 ntBASIC3.97□□□□□ -1.77
PRKNO60260 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
PRKNO60260 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC3.97□□□□□ -1.77
PRKNO60260 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
PRKNO60260 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
PRKNO60260 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
PRKNO60260 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC3.97□□□□□ -1.77
PRKNO60260 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
PRKNO60260 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.77
PRKNO60260 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC3.96□□□□□ -1.78
PRKNO60260 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC3.96□□□□□ -1.78
PRKNO60260 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
PRKNO60260 AL121657.1-201ENST00000327215 531 ntBASIC3.96□□□□□ -1.78
PRKNO60260 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
PRKNO60260 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC3.96□□□□□ -1.78
PRKNO60260 MIR383-201ENST00000362257 73 ntBASIC3.96□□□□□ -1.78
PRKNO60260 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC3.96□□□□□ -1.78
PRKNO60260 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
PRKNO60260 TAF9BP1-201ENST00000396646 746 ntBASIC3.96□□□□□ -1.78
PRKNO60260 ATP5F1P3-201ENST00000397213 657 ntBASIC3.96□□□□□ -1.78
PRKNO60260 RSL24D1P4-201ENST00000400938 484 ntBASIC3.96□□□□□ -1.78
PRKNO60260 RNU6-757P-201ENST00000410334 100 ntBASIC3.96□□□□□ -1.78
PRKNO60260 RNA5SP80-201ENST00000410475 111 ntBASIC3.96□□□□□ -1.78
PRKNO60260 RNU4-72P-201ENST00000410754 173 ntBASIC3.96□□□□□ -1.78
PRKNO60260 VDAC1P9-201ENST00000412766 841 ntBASIC3.96□□□□□ -1.78
PRKNO60260 AL161449.1-201ENST00000414531 1199 ntBASIC3.96□□□□□ -1.78
PRKNO60260 AMMECR1LP1-201ENST00000415152 841 ntBASIC3.96□□□□□ -1.78
PRKNO60260 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC3.96□□□□□ -1.78
PRKNO60260 AC090960.1-201ENST00000421072 306 ntBASIC3.96□□□□□ -1.78
PRKNO60260 AL139421.1-201ENST00000423010 169 ntBASIC3.96□□□□□ -1.78
PRKNO60260 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC3.96□□□□□ -1.78
PRKNO60260 USP9YP31-201ENST00000431405 881 ntBASIC3.96□□□□□ -1.78
PRKNO60260 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
PRKNO60260 UBE2D3P1-201ENST00000436669 444 ntBASIC3.96□□□□□ -1.78
PRKNO60260 PPIAP17-201ENST00000438507 471 ntBASIC3.96□□□□□ -1.78
PRKNO60260 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC3.96□□□□□ -1.78
PRKNO60260 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC3.96□□□□□ -1.78
PRKNO60260 MTND5P2-201ENST00000442927 1142 ntBASIC3.96□□□□□ -1.78
PRKNO60260 AL512326.1-201ENST00000443050 721 ntBASIC3.96□□□□□ -1.78
PRKNO60260 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC3.96□□□□□ -1.78
PRKNO60260 AC009963.2-201ENST00000453431 138 ntBASIC3.96□□□□□ -1.78
PRKNO60260 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC3.96□□□□□ -1.78
PRKNO60260 RNU6-1218P-201ENST00000458990 108 ntBASIC3.96□□□□□ -1.78
PRKNO60260 AC010468.1-201ENST00000461022 817 ntBASIC3.96□□□□□ -1.78
PRKNO60260 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.96□□□□□ -1.78
PRKNO60260 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC3.96□□□□□ -1.78
PRKNO60260 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.96□□□□□ -1.78
PRKNO60260 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC3.96□□□□□ -1.78
PRKNO60260 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
PRKNO60260 PTK2-220ENST00000520151 573 ntTSL 4 BASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms