Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC5.78□□□□□ -1.48
CUX2O14529 AC022616.2-201ENST00000523185 300 ntBASIC5.78□□□□□ -1.48
CUX2O14529 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC5.78□□□□□ -1.48
CUX2O14529 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC5.78□□□□□ -1.48
CUX2O14529 ELOCP29-201ENST00000588193 334 ntBASIC5.78□□□□□ -1.48
CUX2O14529 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CUX2O14529 AP006437.1-201ENST00000641440 3685 ntBASIC5.78□□□□□ -1.48
CUX2O14529 MTCO1P8-201ENST00000416914 1523 ntBASIC5.78□□□□□ -1.48
CUX2O14529 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
CUX2O14529 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CUX2O14529 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC5.77□□□□□ -1.49
CUX2O14529 AC017078.1-201ENST00000416146 368 ntBASIC5.77□□□□□ -1.49
CUX2O14529 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC5.77□□□□□ -1.49
CUX2O14529 AC104058.1-201ENST00000448028 297 ntBASIC5.77□□□□□ -1.49
CUX2O14529 AC108938.1-201ENST00000451204 136 ntBASIC5.77□□□□□ -1.49
CUX2O14529 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC5.77□□□□□ -1.49
CUX2O14529 BTF3L4P4-201ENST00000506381 449 ntBASIC5.77□□□□□ -1.49
CUX2O14529 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC5.77□□□□□ -1.49
CUX2O14529 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC5.77□□□□□ -1.49
CUX2O14529 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC5.77□□□□□ -1.49
CUX2O14529 AC092868.3-201ENST00000560515 784 ntBASIC5.77□□□□□ -1.49
CUX2O14529 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC5.77□□□□□ -1.49
CUX2O14529 AL162713.1-201ENST00000604480 262 ntBASIC5.77□□□□□ -1.49
CUX2O14529 ATP1B3P1-201ENST00000605365 821 ntBASIC5.77□□□□□ -1.49
CUX2O14529 AL590808.1-201ENST00000618696 141 ntBASIC5.77□□□□□ -1.49
CUX2O14529 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC5.77□□□□□ -1.49
CUX2O14529 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.49
CUX2O14529 AC093849.1-201ENST00000563631 2209 ntBASIC5.77□□□□□ -1.49
CUX2O14529 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CUX2O14529 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CUX2O14529 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
CUX2O14529 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CUX2O14529 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC5.77□□□□□ -1.49
CUX2O14529 U3.39-201ENST00000408569 239 ntBASIC5.77□□□□□ -1.49
CUX2O14529 AC233981.1-201ENST00000423224 461 ntBASIC5.77□□□□□ -1.49
CUX2O14529 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC5.77□□□□□ -1.49
CUX2O14529 RNU6-1334P-201ENST00000516032 105 ntBASIC5.77□□□□□ -1.49
CUX2O14529 RN7SKP209-201ENST00000516888 304 ntBASIC5.77□□□□□ -1.49
CUX2O14529 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CUX2O14529 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.76□□□□□ -1.49
CUX2O14529 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CUX2O14529 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CUX2O14529 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC5.76□□□□□ -1.49
CUX2O14529 USP12PY-201ENST00000427677 1064 ntBASIC5.76□□□□□ -1.49
CUX2O14529 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CUX2O14529 RNF148-202ENST00000447240 839 ntTSL 2 BASIC5.76□□□□□ -1.49
CUX2O14529 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC5.76□□□□□ -1.49
CUX2O14529 RNU7-157P-201ENST00000459600 66 ntBASIC5.76□□□□□ -1.49
CUX2O14529 AC133134.1-201ENST00000466800 359 ntBASIC5.76□□□□□ -1.49
CUX2O14529 RPS29P26-201ENST00000477483 171 ntBASIC5.76□□□□□ -1.49
CUX2O14529 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC5.76□□□□□ -1.49
CUX2O14529 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC5.76□□□□□ -1.49
CUX2O14529 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC5.76□□□□□ -1.49
CUX2O14529 AL121766.1-201ENST00000547436 487 ntBASIC5.76□□□□□ -1.49
CUX2O14529 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC5.76□□□□□ -1.49
CUX2O14529 H3F3AP1-201ENST00000559984 334 ntBASIC5.76□□□□□ -1.49
CUX2O14529 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC5.76□□□□□ -1.49
CUX2O14529 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC5.76□□□□□ -1.49
CUX2O14529 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC5.76□□□□□ -1.49
CUX2O14529 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CUX2O14529 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC5.75□□□□□ -1.49
CUX2O14529 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CUX2O14529 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.75□□□□□ -1.49
CUX2O14529 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC5.75□□□□□ -1.49
CUX2O14529 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CUX2O14529 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC5.75□□□□□ -1.49
CUX2O14529 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.75□□□□□ -1.49
CUX2O14529 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CUX2O14529 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC5.75□□□□□ -1.49
CUX2O14529 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CUX2O14529 FAM133CP-201ENST00000332869 704 ntBASIC5.75□□□□□ -1.49
CUX2O14529 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC5.75□□□□□ -1.49
CUX2O14529 RPL21P109-201ENST00000422213 475 ntBASIC5.75□□□□□ -1.49
CUX2O14529 MYL8P-204ENST00000431574 518 ntBASIC5.75□□□□□ -1.49
CUX2O14529 AL135938.1-201ENST00000443141 297 ntBASIC5.75□□□□□ -1.49
CUX2O14529 HMGN2P7-201ENST00000456186 273 ntBASIC5.75□□□□□ -1.49
CUX2O14529 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC5.75□□□□□ -1.49
CUX2O14529 EIF4EP5-201ENST00000528228 640 ntBASIC5.75□□□□□ -1.49
CUX2O14529 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
CUX2O14529 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC5.75□□□□□ -1.49
CUX2O14529 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC5.75□□□□□ -1.49
CUX2O14529 AC017007.4-201ENST00000503353 1352 ntBASIC5.75□□□□□ -1.49
CUX2O14529 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CUX2O14529 MTCO1P9-201ENST00000505577 1534 ntBASIC5.75□□□□□ -1.49
CUX2O14529 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CUX2O14529 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
CUX2O14529 HSPA8P4-201ENST00000511877 1920 ntBASIC5.74□□□□□ -1.49
CUX2O14529 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC5.74□□□□□ -1.49
CUX2O14529 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
CUX2O14529 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
CUX2O14529 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC5.74□□□□□ -1.49
CUX2O14529 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC5.74□□□□□ -1.49
CUX2O14529 snoU13.15-201ENST00000459407 104 ntBASIC5.74□□□□□ -1.49
CUX2O14529 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC5.74□□□□□ -1.49
CUX2O14529 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.74□□□□□ -1.49
CUX2O14529 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC5.74□□□□□ -1.49
CUX2O14529 AL133457.1-201ENST00000564251 987 ntBASIC5.74□□□□□ -1.49
CUX2O14529 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC5.74□□□□□ -1.49
CUX2O14529 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CUX2O14529 FAM35DP-201ENST00000323387 2712 ntBASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 265.9 ms