Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
CCDC187A0A096LP49 AC007954.1-201ENST00000554198 494 ntBASIC4.64□□□□□ -1.67
CCDC187A0A096LP49 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC4.64□□□□□ -1.67
CCDC187A0A096LP49 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.64□□□□□ -1.67
CCDC187A0A096LP49 AC005771.1-201ENST00000585581 349 ntBASIC4.64□□□□□ -1.67
CCDC187A0A096LP49 AC091946.2-201ENST00000606105 291 ntBASIC4.64□□□□□ -1.67
CCDC187A0A096LP49 AC068944.2-201ENST00000610373 403 ntBASIC4.64□□□□□ -1.67
CCDC187A0A096LP49 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CCDC187A0A096LP49 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC4.64□□□□□ -1.67
CCDC187A0A096LP49 AC007494.3-201ENST00000624660 743 ntBASIC4.64□□□□□ -1.67
CCDC187A0A096LP49 AC019226.1-201ENST00000625666 515 ntBASIC4.64□□□□□ -1.67
CCDC187A0A096LP49 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC4.64□□□□□ -1.67
CCDC187A0A096LP49 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.64□□□□□ -1.67
CCDC187A0A096LP49 AC011477.1-204ENST00000623416 1325 ntBASIC4.64□□□□□ -1.67
CCDC187A0A096LP49 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CCDC187A0A096LP49 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
CCDC187A0A096LP49 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC4.64□□□□□ -1.67
CCDC187A0A096LP49 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CCDC187A0A096LP49 AC083843.3-201ENST00000623679 2186 ntBASIC4.64□□□□□ -1.67
CCDC187A0A096LP49 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CCDC187A0A096LP49 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.64□□□□□ -1.67
CCDC187A0A096LP49 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.64□□□□□ -1.67
CCDC187A0A096LP49 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CCDC187A0A096LP49 AP001642.1-201ENST00000624727 2117 ntBASIC4.63□□□□□ -1.67
CCDC187A0A096LP49 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CCDC187A0A096LP49 SMG1P4-204ENST00000523028 4131 ntBASIC4.63□□□□□ -1.67
CCDC187A0A096LP49 Y_RNA.77-201ENST00000362962 107 ntBASIC4.63□□□□□ -1.67
CCDC187A0A096LP49 RNU6-251P-201ENST00000363235 104 ntBASIC4.63□□□□□ -1.67
CCDC187A0A096LP49 SNORD113.2-201ENST00000364166 89 ntBASIC4.63□□□□□ -1.67
CCDC187A0A096LP49 RNU6-444P-201ENST00000383988 108 ntBASIC4.63□□□□□ -1.67
CCDC187A0A096LP49 Y_RNA.560-201ENST00000384689 102 ntBASIC4.63□□□□□ -1.67
CCDC187A0A096LP49 MIR129-1-201ENST00000384972 72 ntBASIC4.63□□□□□ -1.67
CCDC187A0A096LP49 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC4.63□□□□□ -1.67
CCDC187A0A096LP49 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC4.63□□□□□ -1.67
CCDC187A0A096LP49 AC062016.2-201ENST00000420950 676 ntBASIC4.63□□□□□ -1.67
CCDC187A0A096LP49 MTCYBP5-201ENST00000423752 1135 ntBASIC4.63□□□□□ -1.67
CCDC187A0A096LP49 FABP7P1-201ENST00000424004 391 ntBASIC4.63□□□□□ -1.67
CCDC187A0A096LP49 RPL23AP1-201ENST00000428990 471 ntBASIC4.63□□□□□ -1.67
CCDC187A0A096LP49 AL590103.1-201ENST00000434488 307 ntBASIC4.63□□□□□ -1.67
CCDC187A0A096LP49 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC4.63□□□□□ -1.67
CCDC187A0A096LP49 MTCO2P16-201ENST00000436962 677 ntBASIC4.63□□□□□ -1.67
CCDC187A0A096LP49 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.63□□□□□ -1.67
CCDC187A0A096LP49 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC4.63□□□□□ -1.67
CCDC187A0A096LP49 AL450023.3-201ENST00000440592 271 ntBASIC4.63□□□□□ -1.67
CCDC187A0A096LP49 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC4.63□□□□□ -1.67
CCDC187A0A096LP49 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC4.63□□□□□ -1.67
CCDC187A0A096LP49 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.63□□□□□ -1.67
CCDC187A0A096LP49 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.63□□□□□ -1.67
CCDC187A0A096LP49 RPL30P11-201ENST00000495304 339 ntBASIC4.63□□□□□ -1.67
CCDC187A0A096LP49 KLRA1P-201ENST00000503499 986 ntBASIC4.63□□□□□ -1.67
CCDC187A0A096LP49 KRT19P6-201ENST00000510983 209 ntBASIC4.63□□□□□ -1.67
CCDC187A0A096LP49 HMGB3P13-201ENST00000511263 607 ntBASIC4.63□□□□□ -1.67
CCDC187A0A096LP49 MTND3P5-201ENST00000512798 333 ntBASIC4.63□□□□□ -1.67
CCDC187A0A096LP49 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC4.63□□□□□ -1.67
CCDC187A0A096LP49 RNA5SP392-201ENST00000516905 112 ntBASIC4.63□□□□□ -1.67
CCDC187A0A096LP49 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC4.63□□□□□ -1.67
CCDC187A0A096LP49 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC4.63□□□□□ -1.67
CCDC187A0A096LP49 ARL2BPP5-201ENST00000523141 481 ntBASIC4.63□□□□□ -1.67
CCDC187A0A096LP49 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC4.63□□□□□ -1.67
CCDC187A0A096LP49 AC133555.2-201ENST00000550213 292 ntBASIC4.63□□□□□ -1.67
CCDC187A0A096LP49 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.63□□□□□ -1.67
CCDC187A0A096LP49 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC4.63□□□□□ -1.67
CCDC187A0A096LP49 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC4.63□□□□□ -1.67
CCDC187A0A096LP49 AL110118.1-201ENST00000553543 400 ntBASIC4.63□□□□□ -1.67
CCDC187A0A096LP49 AC084757.1-201ENST00000559987 490 ntBASIC4.63□□□□□ -1.67
CCDC187A0A096LP49 AC022726.1-201ENST00000587475 207 ntBASIC4.63□□□□□ -1.67
CCDC187A0A096LP49 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC4.63□□□□□ -1.67
CCDC187A0A096LP49 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CCDC187A0A096LP49 AL031985.2-201ENST00000600955 480 ntBASIC4.63□□□□□ -1.67
CCDC187A0A096LP49 AP001981.2-201ENST00000603241 418 ntBASIC4.63□□□□□ -1.67
CCDC187A0A096LP49 AL356218.2-201ENST00000605264 187 ntBASIC4.63□□□□□ -1.67
CCDC187A0A096LP49 AC010424.2-201ENST00000607594 443 ntBASIC4.63□□□□□ -1.67
CCDC187A0A096LP49 AC103591.3-201ENST00000608684 209 ntBASIC4.63□□□□□ -1.67
CCDC187A0A096LP49 AC017083.3-201ENST00000609955 700 ntBASIC4.63□□□□□ -1.67
CCDC187A0A096LP49 AC116165.2-201ENST00000616705 206 ntBASIC4.63□□□□□ -1.67
CCDC187A0A096LP49 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
CCDC187A0A096LP49 AL392088.2-201ENST00000637607 285 ntBASIC4.63□□□□□ -1.67
CCDC187A0A096LP49 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC4.63□□□□□ -1.67
CCDC187A0A096LP49 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
CCDC187A0A096LP49 OFD1P5Y-201ENST00000447585 2590 ntBASIC4.63□□□□□ -1.67
CCDC187A0A096LP49 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.63□□□□□ -1.67
CCDC187A0A096LP49 AL390237.1-201ENST00000404226 1415 ntBASIC4.63□□□□□ -1.67
CCDC187A0A096LP49 AC092104.1-201ENST00000497346 1441 ntBASIC4.63□□□□□ -1.67
CCDC187A0A096LP49 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC4.63□□□□□ -1.67
CCDC187A0A096LP49 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC4.63□□□□□ -1.67
CCDC187A0A096LP49 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CCDC187A0A096LP49 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
CCDC187A0A096LP49 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CCDC187A0A096LP49 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
CCDC187A0A096LP49 ERVFRD-3-201ENST00000578561 1617 ntBASIC4.62□□□□□ -1.67
CCDC187A0A096LP49 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.62□□□□□ -1.67
CCDC187A0A096LP49 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
CCDC187A0A096LP49 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CCDC187A0A096LP49 SNORA73.1-201ENST00000363107 205 ntBASIC4.62□□□□□ -1.67
CCDC187A0A096LP49 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
CCDC187A0A096LP49 MIR506-201ENST00000384998 124 ntBASIC4.62□□□□□ -1.67
CCDC187A0A096LP49 RPS3AP26-201ENST00000398259 784 ntBASIC4.62□□□□□ -1.67
CCDC187A0A096LP49 MIR1284-201ENST00000408337 120 ntBASIC4.62□□□□□ -1.67
CCDC187A0A096LP49 EIF4A1P3-201ENST00000411521 244 ntBASIC4.62□□□□□ -1.67
CCDC187A0A096LP49 RPS15AP38-201ENST00000413110 372 ntBASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms