Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 AC005517.2-201ENST00000424673 553 ntBASIC5.47□□□□□ -1.53
COL4A3BPQ9Y5P4 OFD1P12Y-201ENST00000427963 1207 ntBASIC5.47□□□□□ -1.53
COL4A3BPQ9Y5P4 AL445567.1-201ENST00000439121 144 ntBASIC5.47□□□□□ -1.53
COL4A3BPQ9Y5P4 AC127537.2-201ENST00000439258 465 ntBASIC5.47□□□□□ -1.53
COL4A3BPQ9Y5P4 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC5.47□□□□□ -1.53
COL4A3BPQ9Y5P4 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC5.47□□□□□ -1.53
COL4A3BPQ9Y5P4 RNU7-136P-201ENST00000458819 69 ntBASIC5.47□□□□□ -1.53
COL4A3BPQ9Y5P4 AC063943.1-201ENST00000465434 453 ntBASIC5.47□□□□□ -1.53
COL4A3BPQ9Y5P4 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC5.47□□□□□ -1.53
COL4A3BPQ9Y5P4 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC5.47□□□□□ -1.53
COL4A3BPQ9Y5P4 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC5.47□□□□□ -1.53
COL4A3BPQ9Y5P4 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC5.47□□□□□ -1.53
COL4A3BPQ9Y5P4 AC005178.1-201ENST00000508392 440 ntBASIC5.47□□□□□ -1.53
COL4A3BPQ9Y5P4 TMEM248P1-201ENST00000510579 951 ntBASIC5.47□□□□□ -1.53
COL4A3BPQ9Y5P4 ENPP7P9-201ENST00000514456 627 ntBASIC5.47□□□□□ -1.53
COL4A3BPQ9Y5P4 RNU6-759P-201ENST00000516740 103 ntBASIC5.47□□□□□ -1.53
COL4A3BPQ9Y5P4 RN7SKP116-201ENST00000516902 319 ntBASIC5.47□□□□□ -1.53
COL4A3BPQ9Y5P4 Y_RNA.719-201ENST00000517156 106 ntBASIC5.47□□□□□ -1.53
COL4A3BPQ9Y5P4 CDH12P4-201ENST00000517835 295 ntBASIC5.47□□□□□ -1.53
COL4A3BPQ9Y5P4 CDH12P3-201ENST00000517935 295 ntBASIC5.47□□□□□ -1.53
COL4A3BPQ9Y5P4 CDH12P1-201ENST00000518435 295 ntBASIC5.47□□□□□ -1.53
COL4A3BPQ9Y5P4 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC5.47□□□□□ -1.53
COL4A3BPQ9Y5P4 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.47□□□□□ -1.53
COL4A3BPQ9Y5P4 AP003385.6-201ENST00000531603 374 ntBASIC5.47□□□□□ -1.53
COL4A3BPQ9Y5P4 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
COL4A3BPQ9Y5P4 AC005868.1-201ENST00000536421 331 ntBASIC5.47□□□□□ -1.53
COL4A3BPQ9Y5P4 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC5.47□□□□□ -1.53
COL4A3BPQ9Y5P4 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC5.47□□□□□ -1.53
COL4A3BPQ9Y5P4 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC5.47□□□□□ -1.53
COL4A3BPQ9Y5P4 AC135628.1-201ENST00000568867 534 ntBASIC5.47□□□□□ -1.53
COL4A3BPQ9Y5P4 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC5.47□□□□□ -1.53
COL4A3BPQ9Y5P4 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
COL4A3BPQ9Y5P4 MIR4737-201ENST00000583979 81 ntBASIC5.47□□□□□ -1.53
COL4A3BPQ9Y5P4 KPNA2P3-201ENST00000584190 848 ntBASIC5.47□□□□□ -1.53
COL4A3BPQ9Y5P4 RNA5SP108-201ENST00000605921 117 ntBASIC5.47□□□□□ -1.53
COL4A3BPQ9Y5P4 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC5.47□□□□□ -1.53
COL4A3BPQ9Y5P4 AC048344.4-201ENST00000619744 527 ntBASIC5.47□□□□□ -1.53
COL4A3BPQ9Y5P4 AC099063.3-201ENST00000642066 185 ntBASIC5.47□□□□□ -1.53
COL4A3BPQ9Y5P4 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
COL4A3BPQ9Y5P4 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC5.47□□□□□ -1.53
COL4A3BPQ9Y5P4 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
COL4A3BPQ9Y5P4 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
COL4A3BPQ9Y5P4 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
COL4A3BPQ9Y5P4 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.47□□□□□ -1.53
COL4A3BPQ9Y5P4 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC5.47□□□□□ -1.53
COL4A3BPQ9Y5P4 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.47□□□□□ -1.53
COL4A3BPQ9Y5P4 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.47□□□□□ -1.53
COL4A3BPQ9Y5P4 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.47□□□□□ -1.53
COL4A3BPQ9Y5P4 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
COL4A3BPQ9Y5P4 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.53
COL4A3BPQ9Y5P4 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
COL4A3BPQ9Y5P4 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
COL4A3BPQ9Y5P4 AC012321.1-201ENST00000561622 1588 ntBASIC5.46□□□□□ -1.53
COL4A3BPQ9Y5P4 TANK-205ENST00000405852 2155 ntTSL 5 BASIC5.46□□□□□ -1.53
COL4A3BPQ9Y5P4 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.46□□□□□ -1.54
COL4A3BPQ9Y5P4 AC000374.1-201ENST00000434698 1745 ntBASIC5.46□□□□□ -1.54
COL4A3BPQ9Y5P4 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
COL4A3BPQ9Y5P4 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
COL4A3BPQ9Y5P4 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC5.46□□□□□ -1.54
COL4A3BPQ9Y5P4 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
COL4A3BPQ9Y5P4 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
COL4A3BPQ9Y5P4 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
COL4A3BPQ9Y5P4 RPL31P1-201ENST00000398116 372 ntBASIC5.46□□□□□ -1.54
COL4A3BPQ9Y5P4 MTND4LP20-201ENST00000402379 270 ntBASIC5.46□□□□□ -1.54
COL4A3BPQ9Y5P4 RPL37P18-201ENST00000411602 243 ntBASIC5.46□□□□□ -1.54
COL4A3BPQ9Y5P4 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC5.46□□□□□ -1.54
COL4A3BPQ9Y5P4 CEACAMP8-201ENST00000413902 580 ntBASIC5.46□□□□□ -1.54
COL4A3BPQ9Y5P4 OR2AH1P-201ENST00000425717 928 ntBASIC5.46□□□□□ -1.54
COL4A3BPQ9Y5P4 OFD1P13Y-201ENST00000431179 1232 ntBASIC5.46□□□□□ -1.54
COL4A3BPQ9Y5P4 AC092162.1-201ENST00000432828 434 ntBASIC5.46□□□□□ -1.54
COL4A3BPQ9Y5P4 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC5.46□□□□□ -1.54
COL4A3BPQ9Y5P4 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC5.46□□□□□ -1.54
COL4A3BPQ9Y5P4 AC097262.1-201ENST00000452559 548 ntBASIC5.46□□□□□ -1.54
COL4A3BPQ9Y5P4 GYG1P1-201ENST00000460864 698 ntBASIC5.46□□□□□ -1.54
COL4A3BPQ9Y5P4 AC090013.1-201ENST00000485147 480 ntBASIC5.46□□□□□ -1.54
COL4A3BPQ9Y5P4 NIP7P2-201ENST00000485801 544 ntBASIC5.46□□□□□ -1.54
COL4A3BPQ9Y5P4 IGLV2-34-201ENST00000490007 283 ntBASIC5.46□□□□□ -1.54
COL4A3BPQ9Y5P4 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC5.46□□□□□ -1.54
COL4A3BPQ9Y5P4 AC105313.1-201ENST00000509121 353 ntBASIC5.46□□□□□ -1.54
COL4A3BPQ9Y5P4 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC5.46□□□□□ -1.54
COL4A3BPQ9Y5P4 AC008802.1-201ENST00000519121 791 ntBASIC5.46□□□□□ -1.54
COL4A3BPQ9Y5P4 AC087373.1-201ENST00000524920 491 ntBASIC5.46□□□□□ -1.54
COL4A3BPQ9Y5P4 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC5.46□□□□□ -1.54
COL4A3BPQ9Y5P4 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC5.46□□□□□ -1.54
COL4A3BPQ9Y5P4 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC5.46□□□□□ -1.54
COL4A3BPQ9Y5P4 DPRXP4-201ENST00000578053 568 ntBASIC5.46□□□□□ -1.54
COL4A3BPQ9Y5P4 AC020910.3-201ENST00000603701 874 ntBASIC5.46□□□□□ -1.54
COL4A3BPQ9Y5P4 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC5.46□□□□□ -1.54
COL4A3BPQ9Y5P4 AC010738.1-201ENST00000604970 987 ntBASIC5.46□□□□□ -1.54
COL4A3BPQ9Y5P4 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5.46□□□□□ -1.54
COL4A3BPQ9Y5P4 PCMTD1P7-201ENST00000634506 357 ntBASIC5.46□□□□□ -1.54
COL4A3BPQ9Y5P4 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
COL4A3BPQ9Y5P4 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.46□□□□□ -1.54
COL4A3BPQ9Y5P4 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
COL4A3BPQ9Y5P4 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
COL4A3BPQ9Y5P4 FAM91A3P-201ENST00000456826 2544 ntBASIC5.46□□□□□ -1.54
COL4A3BPQ9Y5P4 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC5.46□□□□□ -1.54
COL4A3BPQ9Y5P4 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.46□□□□□ -1.54
COL4A3BPQ9Y5P4 AL022393.1-201ENST00000625142 1677 ntBASIC5.46□□□□□ -1.54
COL4A3BPQ9Y5P4 AC097504.1-201ENST00000515103 2415 ntBASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms