Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC6.34□□□□□ -1.39
PCDHB11Q9Y5F2 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC6.34□□□□□ -1.39
PCDHB11Q9Y5F2 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
PCDHB11Q9Y5F2 AC023245.2-201ENST00000530760 2978 ntBASIC6.34□□□□□ -1.39
PCDHB11Q9Y5F2 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
PCDHB11Q9Y5F2 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC6.34□□□□□ -1.39
PCDHB11Q9Y5F2 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC6.34□□□□□ -1.39
PCDHB11Q9Y5F2 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC6.34□□□□□ -1.39
PCDHB11Q9Y5F2 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC6.34□□□□□ -1.39
PCDHB11Q9Y5F2 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
PCDHB11Q9Y5F2 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
PCDHB11Q9Y5F2 AC011416.1-201ENST00000514947 1732 ntBASIC6.34□□□□□ -1.39
PCDHB11Q9Y5F2 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC6.34□□□□□ -1.39
PCDHB11Q9Y5F2 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
PCDHB11Q9Y5F2 PNPT1P2-201ENST00000456768 2050 ntBASIC6.34□□□□□ -1.39
PCDHB11Q9Y5F2 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
PCDHB11Q9Y5F2 RNU6-179P-201ENST00000363350 107 ntBASIC6.34□□□□□ -1.39
PCDHB11Q9Y5F2 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
PCDHB11Q9Y5F2 SET-203ENST00000372688 801 ntTSL 2 BASIC6.34□□□□□ -1.39
PCDHB11Q9Y5F2 EIF4E2P1-201ENST00000393781 255 ntBASIC6.34□□□□□ -1.39
PCDHB11Q9Y5F2 RPS21P8-201ENST00000413365 247 ntBASIC6.34□□□□□ -1.39
PCDHB11Q9Y5F2 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC6.34□□□□□ -1.39
PCDHB11Q9Y5F2 ATP5A1P8-201ENST00000423669 1291 ntBASIC6.34□□□□□ -1.39
PCDHB11Q9Y5F2 RPL7AP14-201ENST00000424041 802 ntBASIC6.34□□□□□ -1.39
PCDHB11Q9Y5F2 COX6CP15-201ENST00000426313 211 ntBASIC6.34□□□□□ -1.39
PCDHB11Q9Y5F2 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
PCDHB11Q9Y5F2 POU5F1P5-201ENST00000445059 658 ntBASIC6.34□□□□□ -1.39
PCDHB11Q9Y5F2 AC011225.1-201ENST00000457751 369 ntBASIC6.34□□□□□ -1.39
PCDHB11Q9Y5F2 RNU6-1218P-201ENST00000458990 108 ntBASIC6.34□□□□□ -1.39
PCDHB11Q9Y5F2 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC6.34□□□□□ -1.39
PCDHB11Q9Y5F2 AC015911.1-201ENST00000495111 156 ntBASIC6.34□□□□□ -1.39
PCDHB11Q9Y5F2 AC008638.1-201ENST00000506035 866 ntBASIC6.34□□□□□ -1.39
PCDHB11Q9Y5F2 RNU6-1213P-201ENST00000517075 94 ntBASIC6.34□□□□□ -1.39
PCDHB11Q9Y5F2 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC6.34□□□□□ -1.39
PCDHB11Q9Y5F2 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC6.34□□□□□ -1.39
PCDHB11Q9Y5F2 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC6.34□□□□□ -1.39
PCDHB11Q9Y5F2 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
PCDHB11Q9Y5F2 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC6.34□□□□□ -1.39
PCDHB11Q9Y5F2 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC6.34□□□□□ -1.39
PCDHB11Q9Y5F2 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC6.34□□□□□ -1.39
PCDHB11Q9Y5F2 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
PCDHB11Q9Y5F2 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC6.34□□□□□ -1.39
PCDHB11Q9Y5F2 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC6.34□□□□□ -1.39
PCDHB11Q9Y5F2 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC6.34□□□□□ -1.39
PCDHB11Q9Y5F2 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC6.34□□□□□ -1.39
PCDHB11Q9Y5F2 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC6.34□□□□□ -1.39
PCDHB11Q9Y5F2 AC092747.3-201ENST00000603769 301 ntBASIC6.34□□□□□ -1.39
PCDHB11Q9Y5F2 AC097467.4-201ENST00000605504 141 ntBASIC6.34□□□□□ -1.39
PCDHB11Q9Y5F2 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC6.34□□□□□ -1.39
PCDHB11Q9Y5F2 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
PCDHB11Q9Y5F2 RN7SL261P-201ENST00000613441 282 ntBASIC6.34□□□□□ -1.39
PCDHB11Q9Y5F2 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
PCDHB11Q9Y5F2 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC6.34□□□□□ -1.39
PCDHB11Q9Y5F2 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
PCDHB11Q9Y5F2 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
PCDHB11Q9Y5F2 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
PCDHB11Q9Y5F2 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
PCDHB11Q9Y5F2 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
PCDHB11Q9Y5F2 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
PCDHB11Q9Y5F2 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC6.34□□□□□ -1.4
PCDHB11Q9Y5F2 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
PCDHB11Q9Y5F2 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.4
PCDHB11Q9Y5F2 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC6.34□□□□□ -1.4
PCDHB11Q9Y5F2 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
PCDHB11Q9Y5F2 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
PCDHB11Q9Y5F2 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
PCDHB11Q9Y5F2 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
PCDHB11Q9Y5F2 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
PCDHB11Q9Y5F2 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
PCDHB11Q9Y5F2 UQCRC2P1-201ENST00000417777 1332 ntBASIC6.33□□□□□ -1.4
PCDHB11Q9Y5F2 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC6.33□□□□□ -1.4
PCDHB11Q9Y5F2 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC6.33□□□□□ -1.4
PCDHB11Q9Y5F2 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
PCDHB11Q9Y5F2 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
PCDHB11Q9Y5F2 RNA5SP188-201ENST00000362916 129 ntBASIC6.33□□□□□ -1.4
PCDHB11Q9Y5F2 Y_RNA.252-201ENST00000364556 101 ntBASIC6.33□□□□□ -1.4
PCDHB11Q9Y5F2 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC6.33□□□□□ -1.4
PCDHB11Q9Y5F2 Y_RNA.574-201ENST00000384766 95 ntBASIC6.33□□□□□ -1.4
PCDHB11Q9Y5F2 SOD2P1-201ENST00000396543 562 ntBASIC6.33□□□□□ -1.4
PCDHB11Q9Y5F2 RNA5SP431-201ENST00000410312 120 ntBASIC6.33□□□□□ -1.4
PCDHB11Q9Y5F2 POLHP1-201ENST00000411806 470 ntBASIC6.33□□□□□ -1.4
PCDHB11Q9Y5F2 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC6.33□□□□□ -1.4
PCDHB11Q9Y5F2 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC6.33□□□□□ -1.4
PCDHB11Q9Y5F2 MRPS21P5-201ENST00000417885 231 ntBASIC6.33□□□□□ -1.4
PCDHB11Q9Y5F2 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC6.33□□□□□ -1.4
PCDHB11Q9Y5F2 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
PCDHB11Q9Y5F2 ACTR3BP6-201ENST00000422332 1241 ntBASIC6.33□□□□□ -1.4
PCDHB11Q9Y5F2 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC6.33□□□□□ -1.4
PCDHB11Q9Y5F2 EIF5AP4-201ENST00000441206 465 ntBASIC6.33□□□□□ -1.4
PCDHB11Q9Y5F2 AC073109.1-201ENST00000445066 978 ntBASIC6.33□□□□□ -1.4
PCDHB11Q9Y5F2 AC011476.1-201ENST00000466725 307 ntBASIC6.33□□□□□ -1.4
PCDHB11Q9Y5F2 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC6.33□□□□□ -1.4
PCDHB11Q9Y5F2 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC6.33□□□□□ -1.4
PCDHB11Q9Y5F2 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC6.33□□□□□ -1.4
PCDHB11Q9Y5F2 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC6.33□□□□□ -1.4
PCDHB11Q9Y5F2 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC6.33□□□□□ -1.4
PCDHB11Q9Y5F2 RPS27AP18-201ENST00000515536 459 ntBASIC6.33□□□□□ -1.4
PCDHB11Q9Y5F2 AC104057.1-201ENST00000515547 497 ntBASIC6.33□□□□□ -1.4
PCDHB11Q9Y5F2 AC009812.2-201ENST00000517657 457 ntBASIC6.33□□□□□ -1.4
PCDHB11Q9Y5F2 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC6.33□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms