Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.9□□□□□ -1.62
SHANK2Q9UPX8 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC4.9□□□□□ -1.62
SHANK2Q9UPX8 AC099489.2-201ENST00000574976 260 ntBASIC4.9□□□□□ -1.62
SHANK2Q9UPX8 AC103881.1-201ENST00000603476 538 ntBASIC4.9□□□□□ -1.62
SHANK2Q9UPX8 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC4.9□□□□□ -1.62
SHANK2Q9UPX8 AL359715.5-201ENST00000623431 443 ntBASIC4.9□□□□□ -1.62
SHANK2Q9UPX8 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC4.9□□□□□ -1.62
SHANK2Q9UPX8 AL137790.1-201ENST00000634283 177 ntBASIC4.9□□□□□ -1.62
SHANK2Q9UPX8 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
SHANK2Q9UPX8 MTCO1P7-201ENST00000419523 1542 ntBASIC4.9□□□□□ -1.63
SHANK2Q9UPX8 AF117829.1-206ENST00000621883 3802 ntBASIC4.9□□□□□ -1.63
SHANK2Q9UPX8 MTCO1P22-201ENST00000604619 1360 ntBASIC4.9□□□□□ -1.63
SHANK2Q9UPX8 AL136116.1-201ENST00000403591 381 ntBASIC4.89□□□□□ -1.63
SHANK2Q9UPX8 AL391417.1-201ENST00000404100 426 ntBASIC4.89□□□□□ -1.63
SHANK2Q9UPX8 AC126124.2-201ENST00000413542 321 ntBASIC4.89□□□□□ -1.63
SHANK2Q9UPX8 AC004552.1-201ENST00000419089 348 ntBASIC4.89□□□□□ -1.63
SHANK2Q9UPX8 AL139413.1-201ENST00000421309 217 ntBASIC4.89□□□□□ -1.63
SHANK2Q9UPX8 BX890604.2-201ENST00000427883 474 ntBASIC4.89□□□□□ -1.63
SHANK2Q9UPX8 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC4.89□□□□□ -1.63
SHANK2Q9UPX8 AC239809.1-201ENST00000450470 217 ntBASIC4.89□□□□□ -1.63
SHANK2Q9UPX8 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC4.89□□□□□ -1.63
SHANK2Q9UPX8 AC090543.2-201ENST00000483963 348 ntBASIC4.89□□□□□ -1.63
SHANK2Q9UPX8 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC4.89□□□□□ -1.63
SHANK2Q9UPX8 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SHANK2Q9UPX8 AL356321.1-201ENST00000621360 228 ntBASIC4.89□□□□□ -1.63
SHANK2Q9UPX8 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC4.89□□□□□ -1.63
SHANK2Q9UPX8 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC4.89□□□□□ -1.63
SHANK2Q9UPX8 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
SHANK2Q9UPX8 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.89□□□□□ -1.63
SHANK2Q9UPX8 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SHANK2Q9UPX8 AL513175.1-201ENST00000431492 780 ntBASIC4.88□□□□□ -1.63
SHANK2Q9UPX8 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC4.88□□□□□ -1.63
SHANK2Q9UPX8 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC4.88□□□□□ -1.63
SHANK2Q9UPX8 AL035404.1-201ENST00000497982 568 ntBASIC4.88□□□□□ -1.63
SHANK2Q9UPX8 SCARNA20.6-201ENST00000517251 106 ntBASIC4.88□□□□□ -1.63
SHANK2Q9UPX8 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC4.88□□□□□ -1.63
SHANK2Q9UPX8 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.88□□□□□ -1.63
SHANK2Q9UPX8 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC4.88□□□□□ -1.63
SHANK2Q9UPX8 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC4.88□□□□□ -1.63
SHANK2Q9UPX8 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC4.88□□□□□ -1.63
SHANK2Q9UPX8 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
SHANK2Q9UPX8 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SHANK2Q9UPX8 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SHANK2Q9UPX8 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
SHANK2Q9UPX8 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SHANK2Q9UPX8 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC4.88□□□□□ -1.63
SHANK2Q9UPX8 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
SHANK2Q9UPX8 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
SHANK2Q9UPX8 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.88□□□□□ -1.63
SHANK2Q9UPX8 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.88□□□□□ -1.63
SHANK2Q9UPX8 SETP5-201ENST00000437270 562 ntBASIC4.88□□□□□ -1.63
SHANK2Q9UPX8 AC140076.1-201ENST00000449897 361 ntBASIC4.88□□□□□ -1.63
SHANK2Q9UPX8 MTCO3P20-201ENST00000454926 688 ntBASIC4.88□□□□□ -1.63
SHANK2Q9UPX8 TRBV8-2-201ENST00000475637 270 ntBASIC4.88□□□□□ -1.63
SHANK2Q9UPX8 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC4.88□□□□□ -1.63
SHANK2Q9UPX8 uc_338.25-201ENST00000613756 156 ntBASIC4.88□□□□□ -1.63
SHANK2Q9UPX8 AC006504.1-201ENST00000562493 3666 ntBASIC4.87□□□□□ -1.63
SHANK2Q9UPX8 LINC02477-201ENST00000512652 1417 ntTSL 5 BASIC4.87□□□□□ -1.63
SHANK2Q9UPX8 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
SHANK2Q9UPX8 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
SHANK2Q9UPX8 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC4.87□□□□□ -1.63
SHANK2Q9UPX8 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
SHANK2Q9UPX8 HMGB3P18-201ENST00000406327 590 ntBASIC4.87□□□□□ -1.63
SHANK2Q9UPX8 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC4.87□□□□□ -1.63
SHANK2Q9UPX8 HMGB1P5-202ENST00000451497 985 ntBASIC4.87□□□□□ -1.63
SHANK2Q9UPX8 RPS6P2-201ENST00000454208 705 ntBASIC4.87□□□□□ -1.63
SHANK2Q9UPX8 MTCO3P16-201ENST00000454456 754 ntBASIC4.87□□□□□ -1.63
SHANK2Q9UPX8 AC026801.2-201ENST00000515352 425 ntBASIC4.87□□□□□ -1.63
SHANK2Q9UPX8 SNORA70.19-201ENST00000516717 90 ntBASIC4.87□□□□□ -1.63
SHANK2Q9UPX8 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC4.87□□□□□ -1.63
SHANK2Q9UPX8 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC4.87□□□□□ -1.63
SHANK2Q9UPX8 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SHANK2Q9UPX8 SARNP-203ENST00000552080 726 ntTSL 2 BASIC4.87□□□□□ -1.63
SHANK2Q9UPX8 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC4.87□□□□□ -1.63
SHANK2Q9UPX8 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC4.87□□□□□ -1.63
SHANK2Q9UPX8 MIR4738-201ENST00000579134 87 ntBASIC4.87□□□□□ -1.63
SHANK2Q9UPX8 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC4.87□□□□□ -1.63
SHANK2Q9UPX8 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.87□□□□□ -1.63
SHANK2Q9UPX8 AL158196.1-201ENST00000616786 434 ntBASIC4.87□□□□□ -1.63
SHANK2Q9UPX8 RMST_9.1-201ENST00000619945 193 ntBASIC4.87□□□□□ -1.63
SHANK2Q9UPX8 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC4.87□□□□□ -1.63
SHANK2Q9UPX8 AL365361.1-201ENST00000566942 3481 ntBASIC4.87□□□□□ -1.63
SHANK2Q9UPX8 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SHANK2Q9UPX8 AC018529.3-201ENST00000624212 2254 ntBASIC4.86□□□□□ -1.63
SHANK2Q9UPX8 MAPK10-373ENST00000641983 6772 ntBASIC4.86□□□□□ -1.63
SHANK2Q9UPX8 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.86□□□□□ -1.63
SHANK2Q9UPX8 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SHANK2Q9UPX8 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC4.86□□□□□ -1.63
SHANK2Q9UPX8 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.86□□□□□ -1.63
SHANK2Q9UPX8 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.86□□□□□ -1.63
SHANK2Q9UPX8 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC4.86□□□□□ -1.63
SHANK2Q9UPX8 RPL7P47-201ENST00000497299 556 ntBASIC4.86□□□□□ -1.63
SHANK2Q9UPX8 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC4.86□□□□□ -1.63
SHANK2Q9UPX8 KCTD9P6-201ENST00000522306 950 ntBASIC4.86□□□□□ -1.63
SHANK2Q9UPX8 AC087888.1-201ENST00000550884 1254 ntBASIC4.86□□□□□ -1.63
SHANK2Q9UPX8 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC4.86□□□□□ -1.63
SHANK2Q9UPX8 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC4.86□□□□□ -1.63
SHANK2Q9UPX8 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.86□□□□□ -1.63
SHANK2Q9UPX8 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC4.86□□□□□ -1.63
SHANK2Q9UPX8 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 122.4 ms